XLOC_015879 (gene) - C. hemisphaerica

Overview
NameXLOC_015879
Unique NameXLOC_015879
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000662:48549..53829+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015879 ID=XLOC_015879|Name=XLOC_015879|organism=Clytia hemisphaerica|type=gene|length=5281bp|location=Sequence derived from alignment at sc0000662:48549..53829+ (Clytia hemisphaerica)
CCTCAACAGACTATGAATAAACAGCAACATATAAAAACCAGGTCTATGTT TAGTTACAGTTGACTGATCACGTCGTTAATTGAATTAAGCTCAAGCTGTG CATTAGATTTTGTGCAGAGGTTAATATCAAAATAATCACAGATTTATATC AAAGTAATGGTAATTCTAACCTGGAGATGTAGTGGACTAGGCCCAAGAAA TCACCAAAATGCAGTATTCGAAGATTTTAGCTAtatcttttttggtaaca atCCTATTATGTGGAACAGGTAATAATCTTTTGGACAACAATTAATTGta actttattgaaaagaactCAACCTGTTTGAATATCTTATTTCAAGAAAGA GGTAACCCTGTCTCAGTTTTGGATAACGTGAAAGAGCTAAATCTTGATGG TAATggagaatgttttctttttgattaaTTGGGATTTCAAGTCTTATTAC TCTTGTGTGCTTAGTAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNtggaaaattttcgaaaaattaacaagaggggggggcccgttt atttggaacctaagagtacattcGTAAAATTTTAGAGAAGATGATAGCTT TCCAATGGAAAAAATGCTTTTGCCATTGTaacatttactttttttttcag atgCTTTTGAGACCAAAGAGAGCAGGGAGAGGAACAATAAACTTTATCAA ACGCTTGCCAATGCTCAGCCAAAACATGCAACTACAAAAGATTCCATTCA CTCATCAACACAAAAgaagaacattcaaaaaactaaaattctgGAAAGTG GACTTTACAACGTATTAGCAAATATCAAAGAAGGAAAAATGAAAAGGCGG AATATGACATCTCTGTCAGCCCGCCATGCAATGATCCGCCCGACTGAACC ACCTACTCGAGGTACTCGTCCAGCTCGCCCAACTCGTCCTACACCTCCAA CTCGACCTACACGTGCCACAAACTGCCCTTGTAACCAAAACTGTCAATCA TGCGGCTGCACCTGTCATAagaaacaaatcaaacaaaacattCATGCAAG AAAAACATTGCCAGGATCGCGTAAAACAATAACGACTCCTCGTAATTTGA CTGAGATATTTCGTAAAAAGTTACTAAAATCTCGTAATGAGACAGATTCT CGAAAACGGGATTTCATGAACGAAGTTTTAGATAGTTCAGTATTTTCAAC AGGGCATGCGCCAAGCCAGTGGCAAGACTTCTATGATAATGGTGCGAAAT GGGACCAGTATGAAGCACCACAGGTTCACCATgacagaaaaatcaatttt gaagaCCCGAATTATAAGGTATCGCTAGGTTTTACAGACGGAGGTCACGA GCTAATGGAACATGCTAATGAAATGACTAATAATCATGTTGAAGCTTATC CAGGAGAAATTGTTTCTGGTGAAAATTACCTGTCAAAATTCGTCTCCCCT GTAGAGCAAGACACGCGCAGGCCTTGTTCTCGCGGTCGTCGCAATTACGG ATATGATAAAAAACGCTATCGAATCAAAGGAGAAGGTTACGACCCATGTT CACGCGAGATGACTGAGGTGACAAAAACCGACAAGGAAAACACAAGGGCT GTTTTCAATACACTAAGTGGGTTTATGACTCCCTTTAATTCGTTCGACAG TGATCAAGATGGACCACAAAAAGGAAACCGCCGTCACGAATTCAATAGCC GAGATCGCAATCTTGATCGGCCAGATGAAGAGAGTGAAAGCGACGAACGA AGACATCACGATGACCGAGATCGGGACGAACACGGAAGTCAAGCACCGTT TCGAGGAAACGAGCGGTTCCGTGTTCGAGGCGATAGGCATCCCGACGGCC GACATTTTCACGATGAAGAGAACCGGGATAACGAATACGAAGATGAACGG CAAGACGCTCGGAATCGTAATGTGAGAGTTGAGAATCGGGAACAAGATGT TGAaacgaaaaatgaaaatcattttgTTGATAAACAACACTTTAATGAAG ACGGTCCACGTGAAGAGGAAGAAAGATATGATGAAGGGGAGAATGAACGT GAAGGTGAAGAGGGGAGAAACTTTAGCAACGAAGGAGAGAAAATGACTAG AGAAGAAGACACGACCTCTAGATTCTTACCTGACGAGCAAGGTACATCGA GAGACAATTTATTAGATTCAAACGGCCGCCCAATGCGCTATGAAAAGAGT GATGAAGTGGTAGGTAAGTTTCTTCAACAAACGAAGGAGGGTGACCAGGA AAAGAGCCTCGAGGAGAAAGCGAATTCGCAGCAGGAGGAGGGTGATGAAA AGGAGAGCGCTCTCGTAGAAGAACAACATGGAGAAGTGCCAGAAACTGAA GTAGACGAAGGAGCTGCTCGAAGATCGGAGAGTGAGATTTCAAATCGAGT GAAAGGTAAGATTTTAAAATGTCTTCGTTTTCTCacgcatcatttttatt ttacgaaacTGGCATTCAAAAAAGCTGATAAacccaaaaagtaaaaaaaa atccatgcattgtttttttggttttcaaaacgtGGTCGTGAGAAGCTCGT TCTGAATTCTTCGTTTAGAAACTAAACTTAAAAGTTACCAATGCTCTTAA AAGTTAGTTCCATAAAACATTATATCAATACTAAATTCAATCCACCAAAG GTATGTTGAGTATGATCGAAGGCACTGATAAGATGGGTTCTCCTGAAGAG AGGAAAGCGATACAAAAAATCATGGATGCATCGAATCGTGAGAATGAATT ACTAGCTAAAAGCTTTGCAAGTAATgttgaaaagaaagttttaagtggaG AACGGAGAAGTTCTGAAATCACTGAAACTGGGAATCCACATGTTAGCACT ATTTCAAACTACGAGAATAAACTCTTAAGTCTTAAGCATGAAAATGACTT TGCAACACCTGGAAATCACCACGAAAAAGAATTTGCAGAATTATCACCAA CCGGTGGAGACAGCTCCATAAGTCAGCTCTTGGGAACTCCCATGAATGAT GAGAAAATTGCACAACTTCCTGAAGGATTGACCGAGGCTATGGGTAGTGC TAAGTCATTGATTACCACTAAAGTTGCTGGTTTAAGTTTTCAACGTTCTC TTCTGAAGTCTTTGGCAGATGTGGCATCACCTACCAAACAAAGCACACCT GGATTACTATCATCGTTTAAAAGTCAAACAAAAAACGATATGAGTAATTT GAAAGAACATTTGAAATTATTCCTGCTTCATTTGAATGAGAAAGGCACCA AGAATCCTGATgtggaaaaacaatttttatctCATACAGCAATTAGTTCG ATTATTAACGAAGTACAAAAAGCGGACCACAACCTGCTAAATGGGAAATC TAAAATCAGGACCAAGATTTTGAACTCAAAAAACAAGCTTTGAAGAATCG AAGGGTTCTCTTAGATACTGGTAACAAATCAAGGTTACTATGTCATCAAA TACTGATAATGCAAAATGGAACACCACAGAATTCAAACACTTAACAATCA TGGATTTGTATTTTGCTCGCAAAGCTGTCTTCATTTCCTGAATACCAAAA ACTCCAAAACGAACATTAGATTTCTCTAGTGGGAACAAAATTCACATAGT GAATTTGGTTTATCCAGCTTTGATATCAAGCGGATAGGATATTTaaagtg ttttttttgtaataatCAGTTGTCATTtctttgttcatttttcattgcag aGTTGATGAGTGCAACCTTTGAACCAATATCTACattcatgaaaaaatca aacatcCGAACAAAATCCACCAACCACTGACTATGCACGTATCACCCATT CATCAATGATCTGAATGTAACCAAACACTATACAGAATACATCCAACTCG TTTCCGAGCGCTAACGATTGTACCAGGTCCATTAGTAAGGTGGTGCAAGT GGCAATGGGTACGACATTTTTTGAATCCATGCATGATTTACCCGCTTTTC TGTTTTGGATAAGTGCAGCTAATCCACCACACAGAGTtcattcaaatcaa aatcaaaatacatGCATTCATCTGCATTCATTCGTCTATTTGtgataaaa taaaatcattgcACATTATTTGTTCAGGCGAATTAATATTCAGAATTCAC GGACAATTCACTCCGTCTGTCCATCTGGAATGAGATCAACCAATAACGAA ACATAGTCCATCCTCTCAAAATAttcatcaatcaatcaatcgtcTGACCA TGAATTCAAATATACTCCACACCCACACATTGTCATCGTACATTTCATAG CACAAAAATAAGGAATCAATAGTTTTTATATACTGCTCAATCCGTGCAGA GTTTATATGTTATATGGACAGTTTTTATGCATCCATGCATGTTAGAAACC TAATTATATCACCGACTGATAAACAACGCTGTTTTAGGGTTTTAAGTTTT AAGTCCACAACATCCATATTATAAATATAAGGTTAGCTGAacgttggaaa aaaaatttggtgcgAATTAAAGTCTTAAGTTAAAGGTTATtataaacttt gaaaattaGAATTTCTAGAATTTAGAAATATATGTAACTAACTCTATGTA AATAGGatattaaaactattttagttcaTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028064TCONS_00028064Clytia hemisphaericatranscript
TCONS_00028065TCONS_00028065Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028065-proteinTCONS_00028065-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000662supercontigsc0000662:48549..53829 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17 0.04 0.09 0.03 0.07 0.13 5.06 5.47 1.25 1.54 3.18 3.19 7.25 5.81 5.29 16.59 5.8 6.09 0.06 0.12 3.65 3.99 3.55 3.64 6.79 8.79 1.25 0.44 0.26 0.12