XLOC_015552 (gene) - C. hemisphaerica

Overview
NameXLOC_015552
Unique NameXLOC_015552
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000635:159224..169338+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015552 ID=XLOC_015552|Name=XLOC_015552|organism=Clytia hemisphaerica|type=gene|length=10115bp|location=Sequence derived from alignment at sc0000635:159224..169338+ (Clytia hemisphaerica)
GATGAATAATCAAAATTACTAAATAAATTAGAAGAAAATACAGTAGATAA
ATGGTTATGTGTCTGAAATAAGACTTGGTTtacatttgacgtcaaaatgg
TAGCATTTGCTGATGATGAAACTGACGAAGAAAAGTTTACTCGAAGTAAG
ATGTCTGTTTTTTTATCATACTAGTAACCCTTTCCACTTGAATTACTCCC
ATCCTACTCTGttccagagtgtatctcacgtttatcgcttcgtagtacac
tctgcgcgcattgtctgtttgatgaaaaaattcccgtacggagacctctg
tgatgaagtatgatttataagtagcaacacttctctcatcgtctcccctc
tcttaccaacactccatcgcagcggtcggtttgaaaaatctcaaatgaga
aaagacaatgacaacagaccttCTACGGCAATGaagtttgaaattagccg
tagatactgggtctgtgtacagacagcTCCCATCCCAAATAAAAGGGGGT
TTTTGCTAGATATAAATATAAGTAGCTGGGTAgttcagtcggtagagcat
ttgCCTTACAATCCAATGGTtctgggttcgatccccggtcagtGCAAATT
CAGAGAGTGAGTAGCTTAGATCGGTAAATCTGATCTAGgtggtaagttac
tgggagctgagagtaggtgtggcgctccaccacagcattcgatctcccag
ctctagcgcaaatagaaaagtaGATGGACTCCCTCTCTCCCGGCGCCGCC
GACAGCCaacagatgaatatacttatgAATTTAATGATGATGAAATTAAT
TATGTACTCGTCGGATCTACAGTCTCCTACATATTTGATGTTATAGACAT
TTTAGCATTCCAGTCATGTCTGGTAAACCTTACTGTTGCTTTGCACCTAG
AATTTAGTCTTTGTAGCCTTCAGCTAGTCTCCATCGATCAACCTAGACTC
TTAATTAAGTTTCAGTATTTCTgcacatttttcttttaaacagtATATAG
GCTAGCTGTCGATTAATATTTTTCCGTCTATAGGAAAGAAGCGGGTTCAA
ATCAGTGGAGATCTGGTGGAAAAACAACCAAGAGTCAACAAGATTCCATA
CCAGGATATCAAATTAGGAGAGGTATTGACAATGAAATAGAAGcccgaat
ctttaacctttttcaagtaaaaaaaagtgaaacctttaaaaattGTCTTC
GAGTGTGGTTCAATTCAATTCGGTCTTTCCGTAAAAAACGATTACATTAC
CGGTaggtacaaagaataaaataccgggtgcgccacaaaaaagtttctct
ctttaaaactaattttctcgaaatataacatttttaaaagaaccattctt
atTTCATCGGNatcagtttcaaaatttaagtgTTTAGTTacggaaaaatg
ctcttaatcatgtaaaggctatggtgattgccaattttaaaataaaaatt
tgatagctcgattttcaacgttttcgagcactttctgaaaataacttttt
cattcaattgagcataacttttgNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TGCATCAGGATGGTTGGGTATTTGGTGGTTTTTCAGCGGGTGTAGTGCTT
TTGCTAGGTAGTACGTAAATTCGTTAGCACTTACACAGTCTCCTTGtggt
acatttttgaaaatcttactttcaatccggcattTGTGTGAAATACAAGC
GGACCGCGCTAGGCTGCGCAACTAAGGTAGAATTTAATGGCTTCACTTCA
GATTCACTTCACCCCTGCCTACGTTTCTGCGAGACTGTATTGTATTCGAG
AAATTGCTTTGCATAACCATCGTTTCAATATTTCTTTAGGCTGTTCTCAT
CTCCTTTCTtccaaacttcaaaaaattaatcaagAATCGTCGGAATTATA
GAAACATCCGAATACTTCATGTCtaacaatttttcatttttctaggaCTT
TAAGACAACCATGTATCTATTTGGTCAATGAAATTACCCATATGAACTGA
ACAGAACTTTGGGGGGAGGTGATGTTTCGAATCGGGAACCCCTGACTTAA
TGGTATTTACACCCTAGACTTTTAGGCCATCGTTACATACATGTCCATTA
TTGAAGAAAAACTAGCAAATGAAATGAAAGACGATAAAAGACccgggggc
actgaccttgacggccgacggggacgtgccgctcaagtttgaaaagtgga
ccctgtcagatatgaatgtttggtaaatttggaaCCCTGTCAGATAGAAA
ATCGAAAACaatttcccattttcaccctgaaaagtggcaaaaatgacgaa
atgtagacaaaagattgagaatttttctaatttccagcctgaaaattgtc
caaaataaccaaacGACGACCCTGTCTGGTACGAATgttaaaaattagta
aattttgaACCCTGTCAGATATTTTCAGAGCCTAAAAAGTGACCCTGACC
AGTGCCACGTCCCCGTTCTCAATTTCGTCTGAGTGCCTCCCCCGGGATAA
AAGACCTTTAGGAAATTCAAAGCATTTAAAATTGATTGATCGTCGTTGAA
AAATATTGCTTTTGGATATAAATCATGTTGTATAATTCTATGCAATTTTT
ATTTGAGACGTCATTTATGTTTCTCAACTGGTTATCTACTAAGTGACACA
AatgaatggattaacgagattTCTCGGCGAAATTCCCACTGCCTTTATCT
ACTATTTAGCGAAACCACAGTCAAAGGAAcgggcttggcaaaatcagcgg
ggaaagaagaccctgttgagcttgactcTAGTCTGACTCTGTGAAAAGGC
ATATGAGGTGTACAATAGGTGGGAGAGTAATCACCAGTGAGATACCAGAA
GTATatttgaaaatagtttttggCGACCACTTTTTATTGCAAATACCTGT
TAATTTGTATATGGGCCCCTACTAAATAGGAATAGGGTactcaaaaagtt
ttcaaaaagagaTTGAGATTGAGAAAAAGATACTGATTTTTTGAACATTC
TTCAATTAAGGATCCCGGCAATGTCAGATTTCTATAACCTCTACATGCTA
TTTTTTACCTGTGCATTGAGTATAGTAATGATGGTTTCGATGAAACCGTT
ACAGTAATCAGTGTTTAAACGTTCTCTTGTCTCAGTGAAGTATATACAGA
GGCTTTTCCGTTTCAAAATTCTTCCTTATCAccgaaatttcaagaatttg
cTATTTAAAAACGCTTTGGCCACTGAGTAATGAAGGtttatgttttattt
tctcACTGTTTTCTCATAGTTTGTCGGTCGAGGAACGTATGGAGTTGTTT
TCCAAGCGGTGTGGAACAAAAAAGATGTTGCAGTAAAAAGTATCGGTGAT
CGAAATGGGTCTGGTACACCAAAAGaggttttttttcattattcattata
gTTTAaccacaatcatggtcgtaatatttgagaaaaaagggaaatccacc
gggaagttttgaaaccacaatcgatttgtaagtgctctaaagtaggtttg
aagggtagagttttaactctgagttttaacactagacttaagacttagag
ccttaggatctcaggatccaaaagttcaaaaatattccaataaggctcag
aatatagcctggaagtctgccaacccctcccaaattgaaatattcgatta
agttaaagagatagcccaaaatcgactttctcgccagaactttaaatctt
gaaaaacgttaaaataaccggaattctcattatatttcgaccatgatcgC
AGTTTATGTATTTGAACTTATGAGGACAGCgtagtgactgaagcgatttg
gactAACTCTCatttttgacccgcaaaatcgaggacaaTAGGATGTCCTA
AGTTACGGTCGATCTCAGTCAATCAGGAACTAGAAAAATTagaagctaac
cgtctccgtTGCAGAAAAGCAtatacatacataaactcgttaATGAGGAC
GAAGCGACGGTAAATATGGGCTCTTTACTATCTTCAATCTTGCTTGCGGG
TAAAATCTTTTCGTTCACTCTTCTGTACTGTGTTCAAAACGGGTCTGCAT
AAACTTTTATGATATTATTATATATTGTAAGTTATAAATTGAAAGTTGCA
GCTCGATTTTGTTTttcacggttttttcgattggAAATCGGGTGTTTGAT
GAAGGAAAAAGAATAAAGAAGATTAtcatctttttgtaattttctccATT
TAATTTAGGTTTCCATATTGTCGAAAGTACAGCATCCTCACATCATTGAC
TTTTACGGATACAGTGAGAAGAACAACCATGTAAGACCTCTATTTATCCC
TCTCTTCAATTCCGAAGGAGGTCCGTCAGGCTAAGATTCTTTTGAAAAAC
TACTAAAGTGAAAACTACCCCCCCCCCATCAAGGGATagttagttttttt
aatttatcttCCACCAAAATATAACATTAAGAActttgaatttaatttga
gtCCATGCGTCATTATGCTATTATCATACCCATGTCTCAGTTACCAGGTT
CTATGGAATGGGACACAGGTTACCACTGACCTATATAAAGCCCAGCGTAT
GCAACGGAGCTTCTTCTATAGATTGAACCACTATATCTTGAAAAAGACTT
CAGGTCTAttcaaataaaaactaaaatcaaGTCCTTGAATATTACAATTG
GAAACAGAACACATCAAAGTTGATCATCTTTTTTTATAATCGATTTCAGA
TCTTCTTGGTGATGGAGTATGCGGATTGTGGATCGTTGTACGATAGTAAG
TTTCTATCCGGTCGTCTGACGATGGAGAGGACGGGGGCGGGGCGGGGGCG
GTAAAGTAAATGACGCGCAAGGGCCGACCTCAGATGTACTTGCCAatgta
gatttaaaaaagaacacACTAAGAGCTTAACGCTTtgttgatggccaaaa
tattaagaacaagttaagaacactttaaggcttcgaggactctaaaacac
ctgatttcttaggtAAATGGAAGAAAATACTCcacaaaatggttaaaata
agaacataagaacatttttaaaacccAAACTGTTAAGAAGATTATGAAGG
CTtcgaaaaatttggatgttcttataaaattgcgtGTAAACTTCTTGAgg
aaatttcttaaattttagaaCTCACCTCGCACTCTGTATTATTGGGAACA
GCGATTTACAACCATTTTATTGCAATTCTTTCTTTCCAGTCATTCACCGA
TCCAACTCAGAATATGGTGCAGTAGAGTACACACCAGCTCATGTGTTGAA
TTGGGGATTACAATGTGCTGAAGCCATGGATTATCTACACACCAGAAAAC
CCAAAGCCATTATTCATCGAGATCTCAAACCTTCCAAGTAAGCGAAAGAT
TGTCGAAGTaagctaaaaaaatttcaaatcggAGTGATGCTCAAAGTTAG
TTTCAATTGATCCTGTTAGAGCCTTCNTGTTTTCAAATCGGAGTGATGCT
CAAAGTTAGTTTCAATTAATCCTGTTAGAGCCTTCCAAGTAGGGTTTGTT
AGCTGAAGGCACAAGCAAGTGTGTTCGATCTTGATTCAATCATACACTCA
ACTACACTCAATTATTACAAAGTACTTTTTGGTTGCCTTTTTGTGCAACC
TTAGAGCGATGGTACTGTTAGGAACTCAAAAACATTAATTTACATCAATT
TCAGTATTTTGCTGTCACATGATTGTGAGATAGTGAAAATCTGTGACTTC
GGTGAGgcgagaatcttcaatactgtgATGACAGCTGGAAGTGGAACTCC
ACTTTGGATGGCACCAGAAGTTATTAACAGTAAGAAGAATGATTTTAACA
AACAACTCAATcccgtacccagagccactttcaccttttgattttactga
tggacgtgatatACAAACCGATCGCTATCAGAATCATCGAAAAGCGagct
aagggactgggttcgaatTTGCGAAGGACTTACAGTTGACACTTGCTAAA
TCGGAGTTCTATTAAAATTAATCTTTCAATAATCCAGAAGATCGATTGGT
CAACTCTTCATTCCGTTTATTTTTATCGAATAAAAAGAGTACTATGGTCA
CCAAAGAAAAGAGCTTAATTTTCTCCGACGTATTTATTTGCTTCAAGATG
AGGGtctaattttgtgatttttgtctGTTTACGTTTAAGGTACCAAATAC
ACAGAGAAGTGTGACGTATACAGGTATCATTACATTTCAAACTTCCTGGA
TATCTTTAAAAATATCGTCAAAAAACTTTATACGTAACTTTTTTTCATCC
CGTTTCATTTAGCGTAACCCGAAGTGTGCAGGTGGCCTTTGAGTTTAAAT
TCGTGGCAGAAAGTACTTGTTTCACTTCTTTCttaataacatttttttct
acCTTAGCTTTGGAATAATCCTTTGGGAGATGATATCAAGAAAGAAGCCA
TATTATGATTTGGAAGTTGAAGGACAAGGCATCTTCCTGGCTGTTTACAA
AGGTCTGGGTTTCTTGTTGAATTAACGATTTATGCTTCTTATAAGAGAGG
CTCAATACTGTATTAGCTATAaagaacaaataaaataaattatgtCAATT
CTATATCTATCAAAAATAGAGGTGCAAAAAAGTATAATTTTAGCCTGAAA
TGAGCAAAACTGGTTCTTACACCCTTTTACAAAGTAATGGTTCTTAAATT
caatctagtctgaatcgcagacttcTATATAAAACTGCTGGTAGTTTAag
aggagcacgaatccgtcaGTGGATGCCAGCAGTCTAAATTGAATCCTTTC
CTCTTTTAGGGCTTAGACCATCGACTTTGACCAATGTTCCGGATGGACTG
AATGTCCTCATGAAAAGGTTTGATAATCTTTACTCTGCAACAAATCATAT
GCAATGATTTATATTCCTTTTTCTTGACTTCTCAATCTAGAATTTTAATA
TCAATTATTTCAGAAAATCGCTTGATGTTAAAGATAAAATCCAGCAGAAC
CTGGGGCTAAAATCTCCTCACCAGTTAGTAAATGAGTTTGGGCTTGGGCA
CGATTTTGTCAGCAATTatctcaatttttgttttgattcattTTAGTTGT
TGGGACGAATATGCAAAGGATCGACCTTCATTCAACGAACTTTCACGATT
TCTCAGGCTAGCTTTCTCGGTAATACGTGGTCAAACATTTTTCTAATGAT
TTCTGGTCAATTAAAACAGATTTAAATGGAAACAAAGATATACTTTTCTT
CCCGGTTACTGGGTACAGTACaatacaccaaattttggtTCTGCCTTTTG
TCACCTACACTATCAATCCAAAGGATGCCCACTCTATTAAGCTGCATTAG
ATTTTTTACTTTCccatcagaaaaattttatttcagtgTACAAACAAGGA
TTTGGATGACATGTTAGATAGACTTCTTTCAACTTGGAATATACACCCAT
TAACCTTTAACAGCTTTGAAGGTACCCAAGAATATGATGTCAAAATTATG
TGCCTTTGAGAATGTCAATGCAATGATTTCAGACATTTTGACACCATTTT
TTTTTGGTAGGAATGTTGTCTTTGAAAATGTCAATGCAAAGATTTGAGAC
ATTTCTTGAAAACTCGAACCTTTAAAAGTTGATCTGTTTTCTTTTCACCA
GTATGTCCACGAAGGAGATGAAGAATTCTTTCAATTAATCCACGAAGACC
AATCAGAAGATTGGGATTTCTGGAGCGAACAAACAATACGTTTGGAGCAT
GAACATTCTATTAACAGAGAAATCTCTCATCTCACTGAAGATTCAAATAA
AACTGCAACAAGACCTGTGATCGACCGACAGCTTAGTATCGGGGAAtttc
ggcgacttttaaaagATGGGAACGAAAATGGGTCCCCGCGTCCGATCCAG
GAAGAAGCTCCGAAGAAGATTAAATCGTTCTGGACTAATACTTCTTTGTT
AACCAAGATAGGACTTGGAAGTGCAGTTGTTGGAATGGTTTTATTTGTAT
ACTATCGGAGGACAAGGAAATAATGAAATTTGTTTATCTCAAggattttg
gacatatttgatGGATTATATTAAGTATCCAGTCTCAGTTTATTTAGATa
agaatttttgtaattttttttatttcacacATTACGTATAGGACCGTATA
AAATATCACTTTTGCCTACCTAAAACTATTAAACGTAAATCAGATTTCAG
CCTTTTTCATCAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027576TCONS_00027576Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027576-proteinTCONS_00027576-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000635supercontigsc0000635:159224..169338 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.08	22.02	8.73	5.83	7.63	6.96	15.36	16.5	13.02	11.92	10.13	9.99	9.54	9.62	13.06	17.51	16.87	17.78	5.57	6.29	9.52	7.67	9.32	8.64	7.01	5.35	13.64	9.28	6.02	5.09