XLOC_015337 (gene) - C. hemisphaerica

Overview
NameXLOC_015337
Unique NameXLOC_015337
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000612:187329..196420+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015337 ID=XLOC_015337|Name=XLOC_015337|organism=Clytia hemisphaerica|type=gene|length=9092bp|location=Sequence derived from alignment at sc0000612:187329..196420+ (Clytia hemisphaerica)
CAACAAAGTTGTTCATCATTGTTTTATTATTGTGCTACTTTCAAGTATTA ATATGGCAAGCTAGATAAACTATACCTCGCTTAATAATATTTGTGTGGTT CGTGGTGAGAAAAGGAgcatttttctggaaatttatctGCAAATATGAAG CTTAAGGGTATTTTTGTGCTGGTCTTTCTAGCCAAATGTGTCTCAGACAG CCTTGGAAACCCTTTGCAACAACCGAGATCAAAGCTTTCTTCTTTCGTTG AAGaatatgaaaaagaaacaaaggcGAAAGGAGAAAACAGAGAATTTCAA CCAGAAAACAGTAAGTTAATGGAACATTTTAAGCTAAcctccgaaaaaat tgaaatagctatgattttttcaaatataaatacGAAACCGAGAAATTGCT TCGTAATGTTCTGGATGAAGAGCTTGCATTTctacacctccttctcacag acccactggtaccccttcccactggaagaaTTGGCCGAAATAtccatttt tttgaagccaCAAAGATTAAGCGGGAATGGATAAAGTAGCACAatatttt tcagtgaggatttgtttatccGATTATTAGAGTATAACTTTCAaatgggg acgatatttttgccaGTTTTTTCGGtccccagtgggtctgtgaaaagggg gtgtttctcacaaactttttttaaagtccCAACCTTATTGAAAAGATCTT TAATTTTTTCGTGGCCTaagaaacagaaaaattctgtttttggttGCCAA AATCTTTGAATTCAGAATTGATAAATGTTGGACGCTAGAAGGAGATAGAT TTCTAacaaacaccaaaaaaaaaattgagtttatATTGTCAAAGCAACAA AAATATACCCCCAATTTCACTCTCTACAAAAAAATCgtattcaatgaaaa aaatatccatTGATAAATACTTCTGAACTCTCGTCCTCACTGGGaattac atttttttcaatcgTGCTCATTGGATTTACAAGCTTTAAATACAGTGAAC TCTCACTAATCCGAACTTTTGTTATTCGTATCTTTCTATAATTTTCGGCC CTCGTCAAAGGAAAATCCTTGTAAAatgctttctataatttgaatttctg tcattcgaacaaattagactCTCCGTTCGATTTCAAATAAGTGTGAGTTA ACTGTAACGTCACAAAAATCCACCCCGCCCCAGCTGGCACACAACGTTGT TTTAACGTTAATCTAACGTTAAATGGACGTTGTGAACGTTAGATAAGCgt tgaaacaacgttgtgtgccagctgcccccccccatTAAATCAAATTACAC CAGATATTATTCATCCTTCTCGTTCTTTCCAAACTGATCGAAGCACCAAG GAAAAGTATTAAAAACCTAAGTAAAGCTACCTTCAGGGAATAAATTTtag cggaaagaaaatttgatggatttggcggatttagctAAAATCCACGTTTT CCATCAACCACCAAATTTTGTTATCCTACCAAATTTAAATTATCTTATTC ATTCCCTAGCTTCCTATTATTTCAGACTTTAAACAGTTTTTTAACTTATC GGTTTTTAGCCTAAATTATCCTTCATCCGTCCAATCATAAATTTTTGCCG AAATTTCTATTCTTTAAAACTAGGCAATTACTaactctgttactaaaaat agaaacacggaggtCAAAATCCGGCTCTTTTcgagtgcttccgttaaaaa atatgacgccATCTtgacgcatatcaagaatttctACTTTCTTCACCAAA AAGACAAATCGAAGGAAGAATCCAAAGAAGTTGAAGAATTGAAAGCGTCG TTATCAACCGATAGTTCTGATgacaaaaatgatgaactttcaCTGAAGAA ATTCAACGATGGACCACCAAATGCTAAAGATGTTGACCCTGCAACTCAAT TAAATCTTGATACAGGTAAATTCTGATATTGGGATTCTACCGTGGCTTAC TATACTTACGGGTTCTAAGTCAACTTACAAGCACTAAGTCAACTAAGTTG TAAGTCAACTTAGGAGTACTAGATCAACTTAGAAGCGCTAAGTCGACTTA AAGCCACGGTAGGATACTcatcgaaatttttttcggatAATGCAAATTTC TTAATTAGAAAACATCTGTTGAGATTGAATCTTAATTTACTAAATGATAC ACTTCATTTGCGTGGCCAAAATTAATTTCTAGAAAATGATTTGCTAGGAT TTGATTGACCCGGCCTTAATCCCCTGGAGCAACCGAATGGTGCCATGGAT GTAGCCTGGAATTGCATTGAATTTATACCAATACATTCTTACTGGTTAAG GGGGTTTCAGTAATACTGAGAAGTTTGGATATTTCctcgttttttgaaat ttgaagttcgggtgagaaagtcgcttttgggctatcTGCTCAATgtaatc aaatatttcaaattgaGAGAAATTTATCTACTTCCAGGCTATACTCTGAG CCTTTGGACGATTCAGacttaaaactctacccttccaacccaAGTTAGAG CGATTTTAACTCGTTTGTAGCTACAAGAATTTCATGGGtacttccctttt ttctcaaatattacgaccatgattgaaGGCTCCAAAAAATGGAATGATTT AGGAGGCGgggtaaaattttaaaacaggGGTAAGCACAGGGTGGAGTTAA CAGTGGTGGGTGTATACAATGTAATCTTTTGCCCCGAACCCTACCACCGG TTATCCTTTTTTCTGTATATACCGTCAATTTTATGGCTGTAAGATtctga aatgaatttttttttgttaaatgaaCGAAAAAATTCCCAAACTTTCATTG TTTTCCCAGCTGGGAAACAACATTGTTTTAACGTCAATCAAATGTTCACA ACATCCAtgtaacgttaaatgaacgttgaaaacgttctgtgccagctggg ttgccTGTTGGGAATGAGAAATAAATGTCTTCTTGCAAAGGCATTTAATA TAGGGAACAACTTTCCTTAGTGGGTAGGGAGTTCTCTTGTTGTGATAAGG GGTGTAttaaaaccattgagtttcaagcccgaagggctagaggcgaaact ttaacccttctcaggccaGAGAAATTAAaatcacttatttcccatccaag agtctcgcctctagcccttcgtgCTTGAAACTCTATGGCTGAAACAATTT TTCCAGTAAAAAAACAGCTAAAGTAAAGAGACTCTACCGTATACTGTAAA CTAACCTTTACTTTTTCATTTAGCTTCAAACAAGAAGGATGCGCACCCAG ATGATggaccaatcgatcacaatgtCATTTATTATGACCAGAATATGAAC CTCGTTCATGACGATGACGAAACGAAAAAACTGTTTGGCCGCGCGTGCGT AGCAGGCGAAGATAAGGAGAACTTGATCGACGTTATCAGTGACCCTAATT TCAAGTAAGAAACTTTCTAAAATATACAATGGATTTTCACTCATTCCAAC TCGAACGAACGGGAATCTTCTTTGCGGTTCGTATAACAGAGAGAATCGAA TcgtagaaagtattttaagagggtttctccttgatggGGACTGGAAagaa gtttgaattatagaaagattcaaaaattaaaagttcaAATAAGCGAGAGT ATTTAGTATTAAGTATTGGAATACTCAGACGCTACTACGCTTTTCTCTTA AAACTATTGGTGACCCATCAAGTAGGTGGCCAATGACAGCTTTTATAGTA gaagataaaattttttttcgaatatttgGATGAGTTGAACGCATTCCGAG AAATCAAATCTTAATAAACCCTGCTATCTTGTACCCAAAGAAACTTGTAC CACGTTCTGATTTTACTAATGGACGTTGATACAATCCTGAGCGTTAAAAT GATTTAGGAGCGATGACCGAGTGGTCAAATGCGTCAGCATCTCAAACCAG GAGTTCGCGGCTCGAATTTCCGCTCTTTCCAAcattccgttcagttcata gatagccgagccggctggctgTGGATCCTGTGAAAACAaccgaaagactg tctaaaagcaCAGATATCGGTAAAGCTCGAagggcaactttaagctttca aaaaaaaagtgaagcaaaaatttgtctttttaaatttcttgcCGATGTaa aggatctagcattttagctttttaattgttttcagagcgtcaacaagaaa attaagcggaaaacgctatttcgcatctctcaaaccagtaaAATTgattg ttgtcacgtgatttctttggtaggaaatcctaccaaaacttgcttcactt ttcgataaagacCGCAGATCTAGCCCATCGGGCTTACAGGTCTGTGTCTT AAAAGTCCAACTTGGCTATCGTCATAAAATGTtgactctatctatctatc aaTAAAAGGGGACTGGATTCGAGTTTGTAAACCTCGCCGTTTGGAAAGAA ATAtatttcgaatatttttttaggctgTCAGCTGGTgaatacaagaaaat aagtGAAAAATTCCTTAAAAGTGTACGAAAGATTTTGCCCGAAACAACAG AATTCCCTAAAGAAAAGAATTCCAAAGACATTTTGACGGCAATCCGAAAA GAGTTAACTGACAGAAGAAAGATATTGGAGGCAGTTGCAACATCAAAGAC ATTTGAAGATGTAAAAGACGGCGACCCTGATATCAAGTCGGAGATCAACA AGATATTTAATTGGATCAGAcattataaaacaaaagatgaagagcaaaag AGGTACGCTTGTCTTTATgatactacaatcatggtcgtaatatttgagaa aaaagggaaattcaccgggaagttttgaaaccacaatcgatttgtaagtg ctctaagtaggttggaagggtagagttttaactctgagttttaacatgag acttaagacctacgaccttaggatctgaggatccaaaaatttaagaaagg tCCAATATAAGGCTCATAATATCGCCTGGAGGTCTATcaacccgagccaa attgaaatatccgattaaatctAAGAGATGGCTCAAAATCGATTTTCACG CCCGAACTCAAACTTTCGAAAAACGAGAAAATGAGCTTAATTCTCAATaa atttcgaccatgattgtacagtTGATTCTCTTTAACTGGAATCTCTATAA CTCTGAtcactttaactcgaacaagttttatggtcccttaagttaaaaat gccttacctttactccataactcaaaattcccttaattcgaacaaatttt tcttccacttgctttttcgagttaaggagactccACTATATTTTATAGTC AGTCTGTCACGTAATAAAATTAATACAGTTTCTCTACCtgtattttttca agaaatttggTATAATGTTGTATGAACGTTATGAATACAAAAGCAATTTT TTGCAATGTTGTCACTTAGATTTAGCCAAATTTAGCTATATCCGAGTAGA TGAAGAATTCTGTTTACGTACACTGGCAcgtacaaaatttttaaaggtcA TGgctataggccatttcacggtcgaaatggatcatgggtaatcaggactg attgcgcctccattacggcttcccgttggctagagtcaaaaatcttcaat ttttttcaaaacttttcaccaatagtaagtcgttattagcgcgcagtggt cctgattacccattacgctttgcgactgtgaaatggcctatgtaAGAGAA TCTGCTCAGACTGGCGACCGACTTTGATATTTATCATCCAGATTTGAGAA AACATTATCTGGAACCTAGATGCATAAAATTGTCATCCTTAAAGCTTCGA AGGtcgagaaaattttcaacatctggaaggtttagattacggatttttgc aagaccgcgtcaaAGATTTTGCAGCTAAGGGTCTGGAACCCAGACCTCGT TTTCGGAGATAGACGGGTTCAACCGAAAAATTCCAGCCTTACACGAaagg gtagttgaacccgactagAGATGCAGCAATCAAATGCTGACTATCATTTC TCTTGGATGGGCAATTGGCCCAttcttttagagctttagcgtgggcggga ACCAATCCTCAATCAGAATATCacataaaaaagaattttgaaatagGAAT ATGGATTCCTATAGAGCTGAGGGTTGTGTGAGCACAATGATCTTGTTTTA TAAGTTTAAAGGGCTTTCATATGGAGGCGGGCTGAGATGGGATAGATTTT CGAACGTCACGTGATTTACTTTTATGCATTTGATTCGTTCAAAAATCCAT CCAACCTCCTCCATAAACAGCCCCTAACTGTCTATGCAATATTCTTCTAT CAAGAAACATTTTCAAGTTTCTTGCTCCTATGCAGAAAAATTTACTAAAa caatgggctgttccataaaatttccatacataggggtggacgaacctttt caagtgaaaacaaTTTTCTTGGGAAAGTGTAGATACCCCTGgaaagtggc aaaatttgctaaagaacccttggaaaaaattcttttcatgtcttaaagtg agggtggacgaacccctggaaattcaagaataactttttacctactgaaa aaatgaaaaaacacttcTTTAGACCCCCTGAAAATTCTTCTCGAATTATC CCCTAGAAATGTTCGTCCGTCCCCTGTATGgtcataaaatggaatggtcc AATACCCATTTCTAAAACAAATTTTATCTCAAATGCAGGTTTCAGAGAAT GTTGAAAGATTACGACAGTTATGAAAAGAGTGACATATTAACCGAAGTTG ATCGAATTGCAATCAACGTCTATAGTCGTGACCCACAAGTCAATGCGTTT TTACTTAACCCATCTGCATTCAAAGAAGGACAAGGGAAATGCACTTTGAA GGTATGAGTTTTGGttttacagtcaactctctctaattcgaactctaTTT TTCAATTCCTActttaattcgaactaaaatgttcgtcccctcagctgaaa agtgatttaaaaaattctctctgtaattcgaatcgaatctttctctaatt cgaataaaatcGTTAAGTCGATGATTTTTAGTCTATTGAAGAAGCAAGTT AAAATTATTGAAAGGCTTTATTCATGGACTtcattttctgacttgaaaac aatggcaTGGAATATCGATTCCCATtaagtttcagtccgttatctttacc tcactggctgaaaaaacgAGTCCGGGTCTGTGCGAAAGGGGTGTATGAAT TTCCTTCATCGCCTCTGTGTTAAGGAGGTGTCGCCTAAAAGGGGATGGTC CGTAAAATTGAATATCCAGGGAGTCTTgttttcgagtgtaaaaatccagt GGTCACCCTTTTTTGACAAGCATACGAAATTTTTCAGGAATAGCCCATTC TACTATATTTCATTCAAAACGACTGAAGACTTCTCATAACGTCACTGACA AAAAGagttttttctaagaaagaaaTATTATCACTCGAATATGCTTCTTC TTTTGTATGAACAAAACATGAGATTagatttctatttggttgagttacag gatgctttgaggcctattttcgcaactatagacgcttccAATGAGCGccc tgtcagcaccttgaactgacaaCCCAAcccccctcacatggcatgggttg accagggtgaaggttcattcacttgccaagtgagctgctgcgagtgggaa tcgatcCTCAGTCGCCTATGCAGCAACCAatgtcaatgaccactatacca cagcgcctgtAGCCTCAGAAACGAAAAGGTTTATTTCAAGGTGTGATAAA TGCAAACATtcctgaaaatgataaaaaataagagcattgaagccttttca aaaatttactggttatATAAGAAAgcaagtctgcgaccgcagtcggaggc gacccgaaggctcctctttcgatagctatctacccgaaggtagggaaggc gccactctttctctgtggatttctccacttctccacttacccttgatcct tctcttaattgctgagcatcaaacaGAGAGCCATCAATTACCatttttgg gaatctttgatatgacccggctgggggttgaactcacaaccttgcgaacc gtagccggatgctctaccactgcaccacGGTTCGCTCTGGttatgaaaag ctttttttccaTATTCCAGGCACATGCTAAATTGCTTCAAAATGCTTTAC ATAAGATGAGGAAATATGACGGGAAAATGTTGGTGAGAATTGATTCCAAT TGGAAGAAAAATGGAGAAGAACCTTTATCGAATACAGTGGAAACATTCTT CAAGTTCACATCCACCATGGATATATCTCACTTAAAAGGCGATGCTGTTG ATGAGGAAATCAAAAAGATCGCTTTGCACAAAAAAGATCGGTTACTTATT CGCTTTGTTGATCCTTCACAAGGTTATGAAATTGCACCTTGGGTTAAAAC ACAATATCTTATGAGTCAACGAGAAGTTTTATACCCAGTTGGAGCAACAT TCGAAGTCGCAAAGACAGATACTAAAACCAAGGATAAAGAATTCCCGATC GGCTATTCATTATATAAATATGTATACGACCTCACTGATGTCCCATCAAC AGGTGTTTAAAGGCGCGTTTTACTCAGGTGAtgaatacacaggttgcaaa attaaagtctgaaagtcaaaatcacgcttttactcgaaatctTTATATGC TTGTTACAATGACATTTATTTGTGATTAGTTCTATTTACactgagacgat taatttgtctcagacgagcaatttagaaaatgagcattatggaggagtgt actttccattcattcaataaataggatctcctccacatatcacattttac aaactactcgtctcagacgatttttccgtctcagtataaatggaactatt AGTTCGAAtctattgacactaataaagttatcagctgtaagttgtaaagc aattaacatgggaataaaatcacgtgggaataaaatcacgtgaacttttt cgagtaatcacatgtttttgCTAcccattgatataattttgcaacccgtg tatcaTGCTCAATACAGAAGGGAACTTTGGACTTCTCTAATGGGAAATTT GATGCAAACAAGAACAGTggtattatttattattttttcatgtaaatatg tttgtttttatcaaaaaatctaTTTTCGAAAGTTCCTCtgtg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027258TCONS_00027258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027258-proteinTCONS_00027258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000612supercontigsc0000612:187329..196420 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.11 0.07 0.13 2 1.33 0.82 0.75 0.9 0.47 1.17 1.44 8.82 7 6.41 14.64 8.38 7.02 0.36 0.4 14.35 13.98 7.7 11.43 3.36 4.92 0.97 0.4 0.17 0.04