XLOC_014771 (gene) - C. hemisphaerica

Overview
NameXLOC_014771
Unique NameXLOC_014771
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000566:196218..201253+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014771 ID=XLOC_014771|Name=XLOC_014771|organism=Clytia hemisphaerica|type=gene|length=5036bp|location=Sequence derived from alignment at sc0000566:196218..201253+ (Clytia hemisphaerica)
CTTTATTCCATTTATTTGTAAAAGATTTAACAAAGAATCAAAAATAAACA TGAGTGGCATCAAAGGAAAAGAGTACATTCTGGTCAAAAAGTTCCATGGA AAACCAACTCCTGAAAATTATGAAGTCAAAGAATTCGAACTTCCTGAATT GAAAGATGGAGGTACGATTGTATTATTTTTGTCTTGGATACTGTTTTTGT ATAATTATAAGGATTTTCATCATTAGAATCCTTTTAATGGTTCTCGTAGC GTATTAACCATTCTTTAGCACCACACTCTACTCTAAAATAATGCATTTCT TGTGATGACCGTATCTGCTaaataatcaaaataacatTTCCCGAAAAAAA ACGTGATATGGATGAAAAACCTTCTTACAGAGCTTAGAATAGTTTTCCGG AGTTTTCCGGATCTTCCAGCCGTTAAAGCGAATGATGTAGATATATAAAA AAAcccgtataattataaaaatactagtctcttttttatgttttatcttt attttatttagtattttcaacacttgctctccttgaggtcagatctctga tcttcaccatagtATGAAAATTAATCTCTCCTGTCCGAACTACAAACTTA CATAAAAATAGCCGAAGTCTTTTCTTCTTAGAAAGACGATTTTACCACGA GAAGATGGCAAATCTTCTCTGGGTCCCTCTGACTCTGGGTCACTCCTGGC TTCGGACAGGCTGGCTGTCCTTTGAGACAGTAAGGCTCATTAACCCTAAT TTTGTACATTTTAGAGTTTGCGATGGAGGTTACTTACCTAACTGTTGATC CCTACATGCGGTTTGTATTCTATTTATTGTTGAACATTTTCAATATAATT TACAAGATTTAGTACGCTTGCAATCCTAAAATCATGCTAATTACCTCCAA TATACCTTTTCGGAATAAACAAATAATCTAAGATGCTAGCAGAAGCTAtg agagaaagaaaaacaacaactttgATTTCACTTTAGCCGATTTTTGAGGC TTTGGCATCAATGTTTAGGCTGTTTGCAAGGCGTTTTGATTGAATTTCTc cattttggtaatttttcacTTCCACAAAAGTGTCACATGGCAACATCGTG AGGAGGTGGATTGTTTATAAAATATAGTTATCCAGTACTTCATTTTTGAA AGAGTAATACTTgaagtttttaaacagctttctTCAATTCTTAGCATCCC AGCTTTCACTGTTGAAGGCCAACGTATGCCTGGAGAAGGTGTTGGAGTGT AAGTGTTTActtttggaaatcttttcttATTTCTTCTCCTACTTAGGTTT GATTGCAAAGTTCTTTTgtaaaaacaagtaaatttcAGCTGGGACTTTTG GCTGTTATTATTTGTTCATggttttcaggcttaaatgttcttaaaatgtt cttagaatgttcgtATTATTCTTATTTCACATTCGTTTATTGATTTGAAA GTGGATTCAGATTAACAATTTCTTAGCTGTTCTGAAATTTGAGACTGGAA TTGTTCTTTATTTGTTCCAAAGTTTTGCCAAAAActgagcctcatgttct tataaaactgttcttataaaagaaaaagcgtgcaATAAAAAAACGCAACG AAGTTTTagctttgataatttttttgtctttttatagaGTTGTTCAAAGT AAGAATGCAGACTTCCCAGTCAAATCAAAAGTCATGGGAAAGACAGGATG GGCTACACATGTTGTTGGAAATGCTCAGGACCTTCGAATTCTTCCAAATG ATATACCTCAGCTGTACTATTTCCTTGGTCCATTAGGAATGCCAGGGTAC GTATGACTTTAATAGGGTTGATATGTCTCCATAAAAATTCTAAATCTTAA GTTACCTCCTTCTTAACTGACAAAGCAAAATAAGTTAGTAAgtagatttg aaagaaattttcccTGTAGCGCTCTTTGAGAATGATCAGGTGCCACATAA ACAAAGGGGTGGAACGAGCGGGAGGGCTGGATatcttctaattttgataa aCGAGGGGCCTTGGAAATTGTACTAACTTTGCTTGAGTGAGAGAAAAATA GCTTAAAGCAGCTGTTCATGATGTGATCCCTTCAGATTGACAGCGTACGT CGAGATTCAAAAAACAGAACCCAAATCCGGAGATGTGTTTTTTGTCAATG CAAGCGCCGGAGCTGTTGGATCTGTTGTTGGTCAAATGGCAAAACGAAAA GGTCAGCATCGATTATTTTCTTGCTTTATCGGGTGCATCAAGAAAAAGTT GAAGTAGAGTCTACATAActcgtgtatcccaggctttatttacgttactg atagacgccagagaattatctagcgctatcagtaaacataaaaaagctga taatacgcagggaacaaAGTTGGTTGATTCTACATAACTCTAAAAACCAG CAAAACCAGACAATTTGATGAAATATAATAAGCAGCATACATAACTCTAA CGTTTTAACCTTTGAAAgccgctaacttttttgaaaaaggccaataagtt catcatttttttctggaaatttattctttcaaaggcaatttctcgaccag aaCAAAcaattcaggtatcaactttggtatcgttggaaagctctttctct cagctacaaaaaatagcagattttttttctctgaatctcaagtggtcagg agttatgaccaaaagactgtgtatcggtaaaatgaccttttcaaaacgta tatatacgtatttcGCCTCCTAAGGGTTAAGGAGATGAATAAGTCAAAGT GTCAGGAAGAGTTCGACCTTATGAAGGCAAAACCCTTTTGATTATCTCGT AAgacaagaaaaagtttttaaaagaaaaacaagcacTGAAATCTATCAAC TTTGTCTTTGTTCAAGAAAGGTTTGCAGGGGATATTATTTTCCGTGTATG TTAGTTCGCAAAGCTTTTACAGATTTTgggcttgtttttattaaattatc tTGCTTTATTCCTGACATTTGTTTGAATTCTATCACGACGAATGATATAT CTAAACCATCGTTgaatcattagttttttctcttattttagGATGCAAAG TCGTTGGGTGTGCAGGTTCAGAcgagaaagttgcgtatttgaAAACGATT GGATTTGACGAAGCTTTTAATTACAAAACGAATAATTTCGCTGAAGCCAT GAAGGCTGCTTGTCCTGATGGTATCGACTGTTTTGTGGACCATGTAAGCT TTCGGTTTTATTGTTGCTGTTCTGCTTTTCTTCATTGCTTAGTCTCTACC TCTAAGCGAAGGTTCTAAAATTCTCGTTTTGATTGACAGGTAAAACTAAC AATTTTGATTGGATAGAAATCTGTTAGAATGTATAAAAACTTGAACAGTC TTGAACAGAGTTTAGACACTTTACTCTTGCACCTTATTTACATCAATTTT AGCTAGAATAGGATTTTAAAAGATGTGAGATCACATTGAAAAGctatatt ctcaacttcagttgagctataatctgagaatgtctgtatgaatgtctgta tgtatgtatgtatgtccgtccgaaaactttagggcaggctggacacttca aaaaaggtcggatttggctgaaatttggcacacttgttccttNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGccttgggacgagttttttg ccaaaacgaggctaaagctttgaagcagcctacagccctccaaaatggtc gcatttggttgaaatttggcacaattgttcattgggtaaatatctggggg tctgcaattgggcctatgaataatttgaagccactgaagttgagcccagt gcgttgcgcacgttcgactatttttcAACACTGTTTTCATTTGAATGGTA GTACTGAATAGTGAAACAGAATTGAAAGTCTATATTAAAAAAACGCTAGC CATTAAAAGCTTTACACTGTCCAATCAAAAAAACCCTGCTCAATTCCAGT CGCACTGAAAGCCATGGACTTATAATATGGATCTATATAATCATAGTTCA GAAATGAacggagaaactttttttttcctaATACTTAAAGTTTCCTGCTC TTTCAAGCATTCGTCAGTTAGTTTTATAGATCTATATATCAATTCAACAA AACTTTCTAACCTCTTTTTACAGGTTGGAGGATCGCAATACGATACAGTA ATGCCGATGATGAAATTTGGTGGTCGTGTTGCTCTCGTCGGTGAAATCTC CGGTTACAATGAGACTGAAAAACCACCAGgtatgaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026289TCONS_00026289Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026289-proteinTCONS_00026289-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000566supercontigsc0000566:196218..201253 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PTGR1prostaglandin reductase 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
84.8 86.61 24.02 14.74 8.4 7.34 12.64 13.56 36.16 29.02 28.41 27.38 129.1 97.64 28.58 34.84 24.25 23.01 180.09 171.52 18.54 19.67 43.29 42.1 24.71 27.33 10.44 7.02 11.97 12.81