TCONS_00026289-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026289-protein
Unique NameTCONS_00026289-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length266

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026289-protein ID=TCONS_00026289-protein|Name=TCONS_00026289-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
FIPFICKRFNKESKINMSGIKGKEYILVKKFHGKPTPENYEVKEFELPEL
KDGEFAMEVTYLTVDPYMRIPAFTVEGQRMPGEGVGVVVQSKNADFPVKS
KVMGKTGWATHVVGNAQDLRILPNDIPQLYYFLGPLGMPGLTAYVEIQKT
EPKSGDVFFVNASAGAVGSVVGQMAKRKGCKVVGCAGSDEKVAYLKTIGF
DEAFNYKTNNFAEAMKAACPDGIDCFVDHVGGSQYDTVMPMMKFGGRVAL
VGEISGYNETEKPPGM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014771XLOC_014771Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026289TCONS_00026289Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013149ADH_C
IPR016040NAD(P)-bd_dom
IPR011032GroES-like
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.180.10coord: 16..157
e-value: 9.2E-23
score: 80.3
NoneNo IPR availableGENE3D3.40.50.720coord: 158..266
e-value: 7.5E-25
score: 87.0
NoneNo IPR availablePFAMPF16884ADH_N_2coord: 23..120
e-value: 1.8E-25
score: 88.8
IPR013149Alcohol dehydrogenase, C-terminalPFAMPF00107ADH_zinc_Ncoord: 166..261
e-value: 1.4E-22
score: 79.9
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 133..261
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 21..171

Blast
[Close]
BLAST of TCONS_00026289-protein vs. Swiss-Prot (Human)
Match: PTGR1 (Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 1.519e-72
Identity = 125/248 (50.40%), Postives = 160/248 (64.52%), Query Frame = 0 
Query:   20 IKGKEYILVKKFHGKPTPENYEVKEFELPELKDGEFAMEVTYLTVDPYMRIPAFTV-EGQRMPGEGVGVVVQSKNADFPVKSKVMGKTGWATHVVGNAQDLRIL----PNDIPQLYYFLGPLGMPGLTAYV-EIQKTEPKSGDVFFVNASAGAVGSVVGQMAKRKGCKVVGCAGSDEKVAYLKTIGFDEAFNYKT-NNFAEAMKAACPDGIDCFVDHVGGSQYDTVMPMMKFGGRVALVGEISGYNET 260
            ++ K + L K F G PT  ++E+K  ELP LK+GE  +E  +LTVDPYMR+ A  + EG  M G+ V  VV+SKN   P  + V+   GW TH + + +DL  L    P+ IP L   LG +GMPGLTAY   ++    K G+   VNA+AGAVGSVVGQ+AK KGCKVVG  GSDEKVAYL+ +GFD  FNYKT  +  E +K A PDG DC+ D+VGG   +TV+  MK  GR+A+ G IS YN T
Sbjct:    2 VRTKTWTLKKHFVGYPTNSDFELKTAELPPLKNGEVLLEALFLTVDPYMRVAAKRLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIP-LSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRT 248
The following BLAST results are available for this feature:
BLAST of TCONS_00026289-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTGR11.519e-7250.40Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1... [more]
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