XLOC_012910 (gene) - C. hemisphaerica

Overview
NameXLOC_012910
Unique NameXLOC_012910
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000437:140291..149631-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012910 ID=XLOC_012910|Name=XLOC_012910|organism=Clytia hemisphaerica|type=gene|length=9341bp|location=Sequence derived from alignment at sc0000437:140291..149631- (Clytia hemisphaerica)
CGAGCACGTGGTTCTGTAGCTTGGTCCTCTCTGGCTGGGTGCGGTATGTT
GATGTTGTTTCGACAGTTCGATGTTCAGTCTTTTTAGTAAGATTTTCTTG
ATTTCATTGCTTGTCTTTTATGTTTTGTGTATGTTTTAGCCATACAATCT
TTTGACTTTTTTATCTTTATTTACTATTTTTGAATGTACCTAGTAGAGGG
TGTGACACTGTTTTTTTTTCTTCAGTTTTCGGGGAGAGGGGTGCTCCGGG
ATTCAGCAAAAATTTTGACGGGAAAACAGTACCTCGAACCCCTACAAAGC
CCTACCCCCTAAAAAAGCCCGCTGCCATAGACCTTTTTTTAAAGAGGTAG
CCATGTTGAATAATTATGTACTCCAGCATAAAAACAATGATACAGCCAGG
GGGGGTCGGTAGTAAAATCTCAGACATAATGACGTTTACTACGGTGGTGG
TGTGACGAAAAATCGAAAAAAACTTTTACTACCCAGGGTAGTTAATTACT
AAAATGGGTGGTATCTATGTGTTAAATGTTGAAAAAATTTTACTACCTGG
GTAGTTAAACTGGTAAAATTAGCAAATTTCTCTCAATTTTTTGGATGACT
TTTCCGGAAAAATCTGAAAATTTTTATAATTTGAAAAATTTTCTGTTGGA
AAGTTGTCTGCTGCAAACAAAAAATCCTCGAAATTTTTTGTCAATATAAA
AAAGACTTTGATTCTAAGGGCAAAACATTAATTTTTGCACTAGTGACAAA
TGTGTCACAGAAATAATCATTTTTTAGCTTTTTTTGTAAAATCAGTCCTA
AAAGCAACCAAAAAGTAGGTGGTCTCCATGACAAATTGTCCCAAAANTAG
CTTGGTCCTCTCTGGCTGGGTGCGGTAAAGTCTGTTCCATATGTTCAGTC
TTTTTAGTAAGATTTTCTTGATTTCATTGCTTGTCTTTTATGTTTTGTGT
AGCCATACAATCTTTTGACTTTTTTATCTTTATGTACTATTTTTGAATGT
AGTAGAGGGTGTGACACTGTTTTTTTTCTTCAATTTTCGGGGAGAGGGGT
GCTCCGGGATTCAGCAAAAATTTTGACGGGAAAACAGTACCTCGAACCCC
TACAAAGCCCTACCCCCCTAAAAAAGCCCGCTGCCATAGACCTTTTTTTA
AAGAGGTAGCCATGTTGAATAATTATGTACTCCAGCATAAAAACAATGAT
ACAGCCATGTATAATTACTATATCATACATATTTTAAAAATTATGCATGG
CTGTATCATTGTTTTTATGCTGGAGTACATAATTATTCAACATGGCTGCC
TCTTTAAAAAAGGTCCATTTTTCAGGGGGTTGATTTGTGAGAGAGTATGT
AAGGAGATTGCTGATTGCGTGCAGTTGCCAAAAAATCTCATATCTTTCAA
AAATATAGTACAGTTTCAATAACAAAGTTAATTGTGTAACATACAACCAA
AGCATTATAAAAATTTCCTAAAAATTGTGAGAGCCTGATTTAAATTTTTC
TGATTTTTGCAATCCCCAATTAGAGAGACTTTGAAGGGTGGAATAGATGC
ACTTGGTTTGTTTTGGTTTTATCCGGACTCTTGGTTCAGCCTCACTCTCA
TGTCTATATAAGGCCTCAGTTTCTTCACATGGCCCTTTTTCAGTTCTTCA
TTTCTTAGTGCTGACTGCTGTATTTTTGCTCTTCCACCCACCCCAGCATC
TAGGGAGCTTCCTTTTTAGCATTTTCTTTTTTATTTTAAAAGCCTTGTTT
ATTTATACCTGCCTTTTAGTACTATTACTCCTGTTTTGTCATTTTAAGCC
ATATACTCAATATTGTTTACATATACTAGTTGCTGTTTACTGTTTACTGT
TTACTGTTTTTGNTTAAGTGCCCCTCCCCGGGTCAAATGTGTATAGTTGA
AATAGATATCAGATAAATACAGAATTTCAATATAAAATCATATAAAATTA
ATAAGCGTTCATTCTAAAGATATTCTCTCTCAGATAGAGAATATTTCCCT
CTTGAATACATGCTTTCCAAATATGGTACAGCAAAGTCCGATTTCTCTTT
TTGCAGACTGCATGTTTTAGAGTGCTCTAAGACCGCAAAAGTCCTTGATT
TTTGAAAATGTTCTTTAAACCTTTGATTAAATTTGGTGGTAGTTTTACCA
ACATTAAGGGACAAACAGAAACATGAAAGTTGTANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCTGTTTCCTTATGTAC
AATTTTTAACTGCATTAGTTTCTCAGGCCTTAGGATTTGTTTCAATGTGA
TGTCTGTCTTAAAATTTCAGAAATATAGAAATGAGTGACAGCGAGGACAT
GGAAAGCCAATATAACACTGAAGAAGAAGAACAAGAAAGTCATGTGAGTC
TTGATCAAAATGGTATTTTATAGATGGAATGAACTTGTAAACTTGAACTT
ACTCATAGTATAAAATAATCTTTTGCTAGAAATAAGTTACTCTCAGGTGC
CAAAAAACGGGCTCCTCTACTTGTTAATTTTTCTATTTTTGAACCCCCAG
ACTTAAGTAGGAACTTAAATAGACCCCCTTGTTTATTGATTTTTGAAAAT
ATTTTCAGCTGTCGAAAGAAGAGTCCCATATTTTGCCCTAAATAGTCAGC
TTTTGCCTATAATTACCTTATTTTGGAGGTATTTAGAGGTACAATTTCCA
ACCTCCTAAGTTATTAAAACAATAAACAAGCATCTAAAAATTACCATTCA
ACAAAAAAACAATGACTTTAGGCTACAAACAATAATTTCCTTTTAGCATA
AATTCCACTATCATGGATTTGCTAACAAATCCCAGCATTACTTTGAATTT
TTTGGGGTTTTAACCATAATTAGACTCGATTTTAGATAAATGAATTTAGA
GGTCTTTTAGAGATGTTTTCAAGATTTCACTGTCTCTTGCTCAATAGAAG
TTTAATGTTTTGGCATTTTCTAGCTTAACTTTTGATCTTCTGGACCAAAT
TCAATAAATGAATCATCACAATCTTTGTTATCCTTTCTCTTTCTAATGAA
AAAGGTTTGTTTCCTTAAAAGAAGTCATATGACATGAGAAGTTTCACATC
AAACAGGGGAATTTATTTGGGGCACACCTAGTAACGGTTATAATTTTTAA
ATCTTTTTTTGACTCCCTTTTTTAAGGAGGAAATTGACAATACGGATGAA
GAAGATTCAAATTCAGATGAAAATGATGGCCATGACAATACACGGAAAAT
AGAGCCTAAGCACCCAATAGTAAATATCATTTTTAGAGAAAAAGATTACG
TTTTTCTCTTTTTCTAAATTTCTTTCTTTTTCTAAACTTATTTTTANTTA
CGTTTTTCTCTTTTTCTAAATTTCTTTCTTTTTCTAAACTTATTTTTAGG
TGTCAGAAATGTTTTTCATCTTAGATCTGCTTGGATATCTTTCCCCTGAG
ATTTGCAAGCAATAGCTTTAACCAATACTTAGCCTGTTTGTTGTTTAGCT
TACAATGAGTTTTTCGTTAATTTCAATAATTTTATGAAACTAATCTTTAC
ATCATAATGTAATATTCAAGGTCCTTTTTATTTTTAAGATGGCAGAGTTA
GCAGACATGTTGATTTCAATGAAGGATAAACCTGGGACATTTGCAACTGA
TGGTGTTTTGCAAAACTCACCTTTTCCTGGTCTCAATATTAAAGGAGTTG
GTCCAATATGTTTACCTCTTTGTGATACTCAAGCCAAAAAGATAATCAAT
GTTGCTAACCAAGCACCCTTTGGATTAGGAGAGAAAACCTTGGTAGATGA
GACTGTCAGGTATGTCTATAAACGAGAATATTTGATAAAACCTACTTTTT
CGACAAGATTTACCCAAACTTTTTTCTGAAATCAATGCTTTTCATTTAAA
ATTATTATACTAAAAGAATAATTACCTACCCTATTTTATCCAATTTTGTT
TTAATTCATTTTAGAAAAAGTTGGGCCATCCAACCAGATAAAATTTTGTT
GGAAAATCCCATTTTTCAATCAAAGCTGCAATCAGTCGTTTCAAAAGTGA
AAGAGGACCTTGGCTGTGACAGCAATCACGTTAAAGCTGAACTCTACAAA
CTTCTTTTATATGAAGAAGATGGTCATTTTAAACCTCACCGAGATTCTGA
AAAAGAAGATGGGATGTTTGCAACTTTGATCGTTCAACTACCATCTATAT
TCACAGGAAATGATTTGATTGTCAACCACAATGGTAAAACAAAAGTTGTA
AAATTTGATCGCCAAGAATCACGCTATGAAATTATATATGCTGCTCATTA
TGCGGATTGCGATCATGAAGTCACTCCATTGAAATGTGGTTATCGCATAG
CACTTGTTTACAATTTGATTTGGACCATCCCAAATAAGCCACCTCCTAGT
ATGCAAAGTAATGAAACGATAGCAAAGAAATTAACCATGTTGCTCAAAAA
GGTAAAATAACCTTAATTACACTTTAAGTTTAGTAAGAAATCCTATTTCG
TTTACACAATTATGTGTTTCCCTTTTCATGAAGAGTTTGCGTATTGACCA
ACCTTTTTGGTGCTTTTTAAATCAATACAGTATTACCGAAAGCAACCGGT
GAGACAACCATTTTTTCCGATATGTTCTGTGAAATTTCAATCTGTTCTGA
TTGGATCAAAAAGTATCTGAAGTATGATAAAGGTCTCCTAGAAATTAGAA
CACGTTTGTATACTATAAGAATTTGAAGATCATAACATGTAGTAGATAAA
AACACATACCACACGTACAATTTCTTTGCCGGTTGCTTTTGTATTACATT
GGGATTATTAAAATTTGATCAAGCAATGTGTTGAAAAACATCTTTATAAT
AGCTTTATGTCCCTTGTTAAAAATTTCGATGTTGTGTAAAAAAATGATTT
CTTTGGTCACACTGAGGTATTATTGAGGTGAATTTAACATACTTATTATT
GGATGAAAATTCTTCATCTATTTGCACAAATCCTTTTTCATTTAAAATGT
GTCCAAAATGAATTTGGAATGTTTGATGAAATATTGGATTTATTAAGGCT
TTATTGTTATATAATAAGATTTGTTGACAATATATTTAACATCATTCTAA
AAATAGGTTGGTGACACACATGAAAATGTTTTTGGATGGCCCCTGGAGCA
CAGATACAGTAAAGCTTCCCTTACAAATGGACTAGCAGCTCTGAAAGGAA
AAGACAGATTTATTGGCTTGTCATTCAATTTAGCAAATAAAGCACTTTCA
GAAGAAGAGAAGTTTTCGTTTTACATTTCTAAACTTTCTCGTGAAACTGT
TGAGGGCGGTGACCATGATTGGCAAGGCTGTTTCGAAGGTCAGTTTCAAG
TTTCACCTGTCTTATCTTTTTCCTTATAATTTGTTTTTATTAGAATATTT
TTTTCAAAATGCCTACAGGCCAAACAAAATTAAATATAGATGTAATACAG
TTGGGCTGCCTCAAGCTGAATTTAGGCTCTTATTGAGAAACAACTATTAT
AAGTCAAGTGAAACAAATATGTACTCTGTAACCCATAAAAAGGAAATTCA
AAAGGATAAGAATCATATTGGCAGCTCTGTTGGAACGTATTTCGAATTTT
GGGAAAGTACTTTTTGTGCAAAGGCCAGTGTAGATTTCTAGATTTTCATT
TTTGAAATTAGCCATAATTTTACCAATTTTATGTGATAATTTGATTTATT
CATTATTTCTCAAACAGGAACCGGCGACCTCGATGAAGATGATACTTCCA
TTGAAAAGGCGTACGGTTTTGATGGCCAACAAATCGAATTCAAAAGTGTC
AAATTTGATGTTGAGTCTGACCTTTTAGGTTTTGAAAAACAGTTTGATGG
GGATGTTGAAAGTTTTTGGGGTGATCATGACAAAGAAGAAGTGGATGGTC
CAACTGGAAATGAAGGATCCTCCTGTAATCGTTGGTATTCTACATACATC
ATATTGGCTGTACCAGAAAAACTTAAATTTGCATTAGTTTGCAACTCTGG
TTTCAAGCAAGCTTTACGTCAAATAATGCAGGAATTTGAACAAAAGTTAC
CCAAATTGAAAGGGCACATGGTTACGTTTTTAGAAAAATTTTCAGCATCT
TCCTTTACTGACAAAGATGACCCATACCAGAGATACAATAGTCATGGAAG
AATGCAACAGAAAGGAGAGAAAAACATTGTCAAGGTGGTCAAAATATTGA
CCAAATTGGCAGATCCAAAATTGACATCATTATTTATATCAAAGGTCTTG
GGGTCTCCCAGGTCATCATGGGGCTGCAGAAATGATAGTGAAATTTATGG
TCTAATCCCCGAGTTGCCAATCCAATCATTTGCCACGCTTTTGTTGTCTG
TTCCTTGGCAAGGGATTGAAAAAGCAGTTATCGAACTTATCTCGCGTTGT
CCTACCGCTCAACTTTCCAAATGGCTTGATGTTTTTGCGCAAACTGATTT
AACCGAAATTGCCGACAAAGTTATCGATGCAAGTTTCGGAAATGTTGTTT
TATTGACTAGCAGAGAACACTTTCCATTATTTCAGAAAGCTTTCCAACTG
ATTCTTAACAACGAGAAACTGCATTCATCTTGTTGGGAGAAAGTCACTAA
ATCTGTTTCACTTATAAACAGTATTGAATTACTTGCATACCTATGTTCCA
GCTTTCCTCCGAAAAGCTTTATTTTTGACTTTTTGTTTAATTCTATTATC
GGTTATGTGAAGAATGCTACTGATTTGATTGATACAGATCGTTACTCTAC
CATATTATTGGAAGCAGTCAAACCAATTCTTAATGATACAAGTTTCAAAG
ATAAACTTTCGTTACTGTGTAGCCAGATCACTGCCAAGCAATGTTTCCCT
ATTATTGGAAAGATTTTGAGTCACGTCGAGTTGTTCACAAACAAAGAAAC
ATTTAACTTGTTTCTGCTAACATTTATGAAGCAGTTTTCTTCAATCAGCT
TGGAAGCATCACATATACCTGATATTGTCAACATTGCCAAAGTTTTGTAC
AGTCAAAACACATCCTCTGATATGGAACAGCGCAAACTTTTCATCGCCAC
CTGTCAGAAAATAAACAATCCTGATATATTATGTGTTGTTATTACAGAAC
TATCAACAGTTTTTCACAAAGCAGAATTTTCTTTCACCTTGTCGCATTTA
ATCAAATCACTTCTTATATTACTGCAGACACAACCATTCGGAAACACAGA
TGCCATGGTAGCATTGCTACTTCTGATGTTCAATAAAGAGGAGGAAAAAA
TGCTCGAGGAGTTTGTTTCCAATAAATTCATTGTCAATTCTGCTGAAATC
CTTGGCAAAGTTTTGCTAACTCTTTGCTCGGACCAAAACAAGGAGAACTA
TGGATTGTTGAAAATAAACAAAAGTTTCCAAAATGTTTTAAGGTATTACA
TCAATCACTGCACTATCATGAAGCCTGATTCTCAATGCTTCTCGACAGTT
CTTATTTTCCTCTTTAAAAATGAAAAATGGTCGCTTGCTTCAGAGCTTCT
TCCAACACTACTGGAGATTGATTTCATCAAAAAAGATTTCAAAAGTTGTT
TTGAGTCAGTTATCAAAATCAAGTCAAAAAATACTTCAAATTACATCAAA
CTTTTAAACGTCTGCATAGATTCATTGGATTATTTTCTCGGTGCAAGAAA
GTCAGTATCAAGCAATAACTACAAACTGATTCTCGAATTTACCAAGAAAC
TTGCAAAAAGTGGTAACAAAGAACTTTCAGAAAAACTCTCGAATCTCAAT
CAATTGAAATGTAATGACATTGATAACATGTTCAGCAATACACCATCAAT
TTTAAAACAACTTTTGGATGACTTGAAAACAAAGCATGAAAATACGATAA
CGTATCAACTTCTTACATCAACGCGAGCCAGGCATCTTCAAAACGTTCAA
GCAGCTGGACCACCGCTTTTAGATTGGAGCCAACCCAATGCTGTTATCCA
GGGTCAACCTGACGTTCAACACTTCCTTAGAAGTAACCAAGAAACATTTA
TCTACAAAATTTTCAAAAGTGTTTTTGATGCCAGAAACTGGGTTTCACGC
TATAGTGGAAAGAAGCCGTCTGATGGTTATAATTTTCAAACTGAAATTAA
AGGCACTGGAAAAAATACCAAAGTTATTCTTCAAAAAAATAGAGAAGATT
ATGATTTCAAGTTGAGAATGTATAGTGCGTTGATGGCAGAGCTAAAAGTA
TTAAATGTCAAACTGCAAGCTCTTTCAAATAAACGACCATCAGCGGAGCA
GTCAAACCTTTCGGGTGTCTCTCAGAAGGTTCAAGTCATCCAGATTGATT
GAATCTTTAAATGGATTTTAATAGTTCTGTTTTTAAGTATTCTTTTTTTA
ATTTTAAATTTCTGAACCATTTCTGAACTTTCCAACGCAACCGTTTTTCA
GAGGTACCATATTGTTATATCTGAATTTTATCGGAGTGATTGTACCTGAA
TTATTTTGATAAATCTAAACTTGACAGGCTTTTTACCTACCAAATAGAAA
ACAGTTACTGTATATAGGATCCTTCTTAGACACAGATCCATGGACTTGGA
ATAGATTTTTACATCTGCTGGTTTAAAATTCATTTTCAACCTCCACGTTA
ACAGATTTCAAGGATATCTTAGCACATTTTGTTTTATTATTTTTCAGTAT
CATTTTTCTTCACTTTTACACGCAGCGTCTCTAATAGTACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022981TCONS_00022981Clytia hemisphaericatranscript
TCONS_00022980TCONS_00022980Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022981-proteinTCONS_00022981-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000437supercontigsc0000437:140291..149631 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.35	6.58	3.21	2.91	1.5	1.15	2.28	2.64	1.18	2.06	1.79	0.91	0.8	0.73	1.53	1.72	1.97	1.51	0.37	0.57	1.54	1.26	10.2	8.37	0.71	1.9	1.24	1.21	8.51	10.3