XLOC_012707 (gene) - C. hemisphaerica

Overview
NameXLOC_012707
Unique NameXLOC_012707
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000429:200791..210165+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012707 ID=XLOC_012707|Name=XLOC_012707|organism=Clytia hemisphaerica|type=gene|length=9375bp|location=Sequence derived from alignment at sc0000429:200791..210165+ (Clytia hemisphaerica)
atatagttgttcttatgaaaaacatctacaatgaaaatgtaaaatatggg TCTCCATGGCAACAGCTGGTTTGTTTTGTGCTTGGTCAGTTGTACTTTTT GTGGAATCGTTAAATGCCAACCGTTTGTGGATGTTTATCTCGCTACATCA CAACCTTTTGAGAATGGTGTGTTCCTAAGAGGAATagttcataaattacg tcacgaacatcgcttgcctcgtattcaaacaatttccatggtgaATATAT CCcgtgagacattaaatgatttttttatgaatagagaacagttgtaataa aatccgctgggagttaatcaccatggcaataatttcaaaacgaggcaagt gatgctcgtgacgtaatttatgaaaaggtctatctttGATTATCTTCATC ACATAACCCTTTTGAAATTCATGAAACTATAATGAAAAGggtgaaaagat aaaaatacctcctaaatttaaaaaatagtgTGATATCCTATGAAATTTAG TGTTtcagagtccgcgaagccttaaaatgttcttaacttgtcttaatatt ttggtcttGGAAGCCTTATGAGGCTGACCCTGTTAGTGAAGTTAATTTCT GTATTACGTGCGCGTGTATTCTTTTCTTTGAAGGAACACAGCGCGTACAC ATCTCACCTCATCCAGGTCGTCAAATCAATGAAGCTGatataaacaaaga tttaggtatgaaaaaattttaacGCACTTTCGGATAGTTTTTTATTCGAG AATGTAACCAGGGTTTGTAACAgttgcttttattttttcaacttgCGAAA AGTCCCATTCGACTTGGAGTTTGCTTGGGTGAATGACGGACATCATTCGC AAATGTCTAGAATTTGCCTTTCGGTTCACGTGTATTTTGGCCCAGGTGAA CTAACCCCAATGTCCTTATACCATTATAAGTAAATAGATGAAACTTGaat tttctcaagcaagaaagaATTacaaatgacggattgaatcaaaccctttc tttgtttttaagcgGCTGTTTTCTAGCAAtaggttttactttcaatctgg cgtttgtgtgaaaaacatgccggtcacgcgttttggatggggaATAAGTG ACTTCATTTCCAATGAAGAAtaataagcccgaagggctagaagtcaatct ccttggtaggatttgaagccaacaaatcctaccaaagttgcgcggtctTG AGCGGCCCgcctagtttttacacaaatgacagattgaaactaaaatttac cgctaaatttcgaaaaaaatatcaatcgtaaacaaaggaattgctagatt caatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGttaaaaatgcggc gcattttttaaggcttcactttttcttgcctgagaaaggttagagattga actctagcccttcgggctttaaactcaatgttcatttcccatccaggagt tgcGGGTCTAGCCTATcaggctttgaaatcaatggtagATAGGTGCTTTG GTACACTACATACTATAAATCTGCTTTTTGTGATAGGTTTCAAAGATGAC GAGGAGAAGTTTGAACACGTGACCAATGGAAAGACACGTGACATTAAAGT TGGAATTCGTTTGTGGAAGAAACGGAGAGGACGATTGTATATACCGTACG AAATTAGTAAAAAATGTAAGTTAGGAAAAtgataggctacgtcatatctt ccttcgtttcgagcgtaaaactcctactcttcgggatatgagcactgctc ttgttttgaatattgaaattctccggataaatcgcatgcgcactgatgTT TTAATGAagcaatagagagtttcgaaacctaagccaatcagctgtgtttt aacattcttttatttgaaatctgtattgataaacatctttggtgaaagtt gtctattattCTTAAACCTATTGATAAGCAATACCCGTTGGGGGTTACTA GTGGCGGCCTATAcaagtgcctatagaccaagagtaaggcctaaaagcct ggagctgtctattgtatAGACTATTAAAATGGGGAATTGAAAATAAATGT CTATGGGAAGACATGGTACTAAtttcaaatttcgatttttactGTGGAGA TTAAAGTTTAGTCTAGATCATTAATGGAGATGAAATATCAGTGCGTTCTA TTGGGTGTGATTTGCATTGATAAATTAATTTTATTGTAAAACAAAATACA ATAgagtctttttaactcgaaactcTATTTTATTctaaactcgaacaagt tttctcgtccctgtAGTTAAGAAAGGCCTCACAAACCTTACTTNctcgaa caagttttctcgtccctttaGTTAAGAAAGGCCTCACAAACCTTACTCGA AATTTCTTTAGCTGGACCCACACCACGTGTGGATTCGGATTATAGAGACT TCGCTTCTGTTATTAATTTTGATCGAATTTTTATCATAGTTTCATGGTTC AGACGTCAAAAACTGAAGAGAGCGATCCGTAAAATGAACAGTTATTTACA TTGTAACAAAGGAAGGAATGTTTGgatcaaaagaaacaaaaagaaacata aacattttGTAAAGTTTCAACCAGGACCTGGGTAAGATATACGCTAGCCT ACCTAGCCTCCTTTCGTGTCCAATATCTTTCGACTggattgttttttttc gaaaaagaatttCACAGCTGACATGGGCAAAAATTTAAGTTTCTCACGTC CAAAAATGGTGTTTATAGCATTGCTAgataaaaagctgatttttttcatt ttcatttttcaccttcgtgtttgaaaattttagaaaagttttATACGCAT AATAGTCCATTCCGGATtacctttccaaaaagtataaaatcgcTATCTAT GTCGAAATCTATTAAAAGTAATAcgcaattgaaaatttattaccagctaa tttgaaatgtacTTTAACTATTAGAGGCTGTAGTTTTTGATGCAATAATT CTATGCTGCAATAGACcttattaaattttttgatttttcttataaagcGA TTCATTGTGGAATTGTTTCGAGGGTATTATAATAGAATtacctcgaggaa ttcctaagagatttctattgtaatacactcgaaacgaTCCCTAATCCCAA ATCCGCTAATTTTCATTAGCGACAAGGATTTTCGCTTGTatccggggggg gggactaTCAGATATGAGATCTACCATATGTGTGGCTCAAAACTCAGGCC TTTAAAATCAGTTTCGTatatcgcaaaaaaaaattactcaaaTACCAGTA CATTTAGACacttacggtgcattttcttggaaatttaTGTCCACTTAAAG GCGAAAATGGTCTTATCACTTCAAATTTTCGCGTTTTGCCACTTTTTACA CCTTTACAGTGAATTTGTTAAACTTTATTTCATTACGACCCCTACATGAC ACTTTAAGAAGCCTGAAAACCTATCTCCCTTTAAGGGAGTTGCCATAGAA tttgttttgctttatttcCGGCCGCACTGCCAAGCCAACTTTAACGcgaa ttttgtaaaaatcagatagaaaatcaacaaaacatcaGGTTAAAATTACg ccaaagttttatttttgatgaaaacgGATTCGAGGATTTATCAAATAACA CTGTNCgccaaagttttatttttgataaaaaaggatTCGAGGATTTATCA AATAACACAGTGTATAGTACTTACCTGAAAATATGTATTGAATAAATAGA ACCGAAAATTTTAAGTTAACAAATGAAGCTCCGAAATTTACAAGAGGGGA ATATTTTAGATCgagattttcttcattttctttttcaacacCAATCGAAC GAGTCTAGCGTTGAGTTGTATGACGATTCTACCCAATGCGCGTTGTCTTT CCTCCATCGCTTTCACCTTCACAAtcaattctgtaaaaaaaacaaaattg gagTATAAGATATTGAATATTGAAAGTTAATGATGATTTAGGCTACATCT CATAACATTAGCAGAGTTCCCGGATTTACAATTTACAAAATAGAGCTCAT AAAATCGACTGGAATAACAATGGACAGGAGACTGTTTCTTTATAAACTGA TGTATAAAAAAAGGACTGGTTCGGGCTgtgatttctgcctcaaaatttat agtgggaaattcgaatttatcGTATAAAAATAACTCACTTCGAATGATGG TtagaattttggattttctgatttttccttTGGTGGTCGTTTCACGTGTT GGCTTTGTTGTGAATGTTTCTTTTGTCGTGCGTGGTTCTTCGGTGAAGAT GTCGGTTGCCATGGTAACTACATCTTCAGTTGTCTCAACATTGTCAGTCA TTTGAGTGTTTTCTGAAGTTGTTGCAGGGATCTCCTCGGTTGAGCTTGAT TGAATTATCTCACTTGTTTGATCGGGCTCGCGGGTTGTTTGTGGAATGTT TTCGGTGGTTGCTTTAGGTTCAGTGGTCGAGACAATCATATTGATGTCAG TGGAGGTTGTAGGGACACTGTCGGTAGTTTTCGGGATGTTCTCGGTAGTA GTTGTCGGAAAATTGTCGATTGGAGTCGTTTCAGCCAGAGTGGTCGAAGT CGAAATCCGTTTTGTCGGTGATACACTCTCGTCTCCATTGTAAATCAAGT GTCCTACACCTTGGCTATCGAGATCTAGTTCGTTAAGAATAGAGTCTTCG ACATCTTGCAAATCTTGATAAAAATCGTCGTTTTCGTCTGTCGGATTTTG AAAGACGTCATTCTCGTAATGATCGATAGTCTTCGATTGACAACACACTA TAATTTGAAAGATAAGAATGTTAGGACAAAAGTTTGTATTCAAAAATCCT ACAAAATAATTCAACATTTAATACATTTCATACCCCTTTTCATAGCCCTG GTGGTCAAACCTTTTTacacagcggggataaaaatattaaaatcacaATT GGGTAGAAGTTGTAGTGTTCCAAGCTTATATAATCCAGTAGGGATGGATT tggagtgaaatttttcaacattgaatttcaaataagGATAAAATGAAAGT CGATTTCCAAGCGGACGGGGGCtcaaccgggtctgtgacaaagGGGTGTT TTTGATTGAACTAGTGGTCCAGTCTGAAACAGAACACAGCGTTCAAACTC GAACTTCTTAAATTTACTCTTACATGTTGCAAAACTAAAGAGTTTGAAGA AGGCGATTTATAGAAATTAGTCAAAAACTCAAGCTGATTCAAACATATAG ATAAACAATCATTACTGATAATGAAACGAGAATGAAACTCAACACTCACC GAAAACAGCACACAAAGCTACGACTGTGAAAATATTCATCATGCAATATT CTTGCAAACTCTCacagtatttattttcaatgtccTTCACTAGAAGTGAG CTGGTATGATGCACaagaaatttctaccctttTTATGTGTTTCCATTAAG TCTGGTTCAATTAAGCTCCTGAGGGAATTATGAAATTTGATTTATGGTCA AATGAATATTTAATTACATCACTTGAGAATTCATGGAATACGTTCCATTT GTACCGGGAATTATCTATCTTTTGTCTTCTTGACTGTCTCATGGGAATAG TTCAATATTATATTGCTTTCCCAAGAGAGCAGTGGATTGTTAAGATCAAC TATAAAAAGAGTAGAAAAACAAAATATGGACAATCACAATTCAAAGACAC AACGTGCTTGTTAGAAAACTTGGAGCAGTTTAAAGATGAAGGCTTTCGCc acaacaattttgttacttttggtCAACATCTCCATGATGGAAACAAGATC CATCAGCGATAAAGAATTAAGTAAGTGACTTGCAAAGTTTATtaaataat tgttttgtttgacCATCTTTAAGGTTTTCACCTCTTGACTCTCGAATATT GAGATAATTTAGCAAAAAGGTCAAAATTCCTTTGCAAACCCTTATATGTC ATCTATAGAATTTATTACTTTTGTTTGCAAGTGTCTATCAAAGCTTTCTA CGATTACTGTTGGGTATTCCTTATCCTAATCTGTGTCTCTTTTCTTTTCA GTTGACCTCCTCAAGGATGTTTTGAAACGAGGtgcccaaggacccaagtc gttcgtccaaggtggtgACGCTCAAGGACCCAaatcgttcgtccaaggtg gtgacgcccaaggacccaagtcgttcgtccaaggtggagacgcccaagga cccaagtcgttcgtccaaggtggagacgtCAAATATCCTTTCACTGATTA TACAGGACCGCCCTACGACGCCAAACAAACCAAAACCTcacaaaataaca aaggcaaagATGTTGTTATAAACTTGAATGTGTTCTAATTATTTTATtgg ataatttttgttttgttaagttAAAAAATACATCATTTTagtcaaaaaat aaatcttgAATGTATTTGTCCGTATTTGTCTTTCACATTATAATCATAAA TAGGTGCGTGTTTTTAAACTATGTTCGTTTCAAGTGTGCACTAATTTTTC TTGCTTCTTTTTCCAATCTCTATTTAATTCtcatttatatattttgaact ttgaaaGTATAATTCAAAGCACTACTATAATTTTTAcgaaaaagttttga agttgaaaattatgaaaagaaACCTCTGATGCCGAAATGTGAAAAAGGGT TGCATCCAGAGTAACAGCATCTATACCATGAATGGAgtttttgtatcttt ttctccttcattttaattttgatttttgaaagttttcgaaATTATTTGGT CAAATAATaattattttctcaaataatACGGCTCAAATTTAATCGCTCAA TGACTGctaaaaacctcaaaaaaaagcaaaatagaGCCTTTTTTCTTCAG TTCTGAATGctattcaaaataattattatgCCACTCATTTTAAATAAATC GCAATCTCAACATATCTGCAGCGGGGACTAAAAGCCTGTAACTTTCGTAA TAATTCGAATGAAATCGGTTTTGTgtttgttggaaagataaatagGTGTG GAATAATATCAAGTAGAAAAAAACTGGAAAGGAGtcggaaaatgaagatg atgATTGCAGAAAAAAGAAACTTAATGACGAACTGTGCTGTAAATTCCGT TCTTGCAAGAGTAATTTTTCAATTCCTTGACAACATTTCTGGTTATATTC AAATATATTAACTCACTCGAAAGATAAAGCCTAAAAGGTTACCAATCGTT CGCtttaaaataagcaaaaaaataatctaaacCCATTTCGTAGCCAATCA GACAGTATTTTTAGGCTGTATTTTTTCCCTGGATACATTTTTTTGACAAT TATTTTACAGTGATAACCCTCTAACATTGAATATTTTtactataaaaatg aagatcaggacaactttaaaaaaagttaaatttttctttaatttttcatc ttcatcttcaacaAGTAGAAAACCGCTATTTGATTTGATGAAATCTATCG GAAGTCTTCACTCAGAGACACACCAATAAATGACTGACTTAagttcaaat tttatcaaaaattatcccATTTTTTAATCTTAATTTGAAAAGGACTTTTG TGATAAAGGCCTGAGCAAACCGATCCAAAATTTCATCCAACATAtgcctt ttttctgatgttggatgaaataGTGGACTGGTTTGCCCCGACCTTAAATA AGTAGGCTTTGTAGAATACAAATGGGTCCGTGATACAGGGTTGTTAAGTA AAGANAAGGCTTTGTTGAATACAAATGGGTCCGTGATACAGGGTTGTTAA GTTAGGATTTTTGTTGTACaaaactttccaaaatttcctgtTTTTCTATA GTTGTTCTGGGACAGTTGGCAAATCAAAATGGCGCATTAATTACATCAAA CTACACAACGCATGTATTGATTACAGTGATAGCGGTAAGTGACCGACATC CGAATGATACAAGGAGTATAAtctagcaagctagacaacTAATTCAGATA TAGTAGAAAGAAATAAAGCGAAAAGTAATGTAGGGGACAAATCCCGCAAC TGtcatcgtattatcatataacgcctaaactactgtattacacgcattat aaacgactccagccTATAAGGAGGAATATTAACCTATTTTAtctatttca taggattttaCTATTAAATTATTTTAGGTATCGTTCTCCACGAGATGATG CACTCGATGGGATTCTATCATGAAATGCAACGTGGTGATCGTgataaata tatcaaaatacaccataaaaacatacaaaaaggtTGGCCTAGTTTTAAAA TcactatacacgtttttttataagaacataacgcCTCGATGGccaaagtt aagaacattttatgaaCTTTATACTCTTAGCATTTATCTTTTTAGGAAAT CGCACAAATATATTtacaaattggtgaaaataagaacattttaagaacat ttttaggctttttaaGAAGATCCGCAAACTtcaaaatgttttgatgttct tataaaaaacgttcaCTGTGGGGTATCTGTATAATGGTTCATGGATCTCG AAGCCATGGTTGAGAATTCTTGGCTCTGTCACTTTACAGAGATTCAGGAG TTTACCATTTATTCCTAATTGAAGTTTCATATTGATTATCCATTTTTTAT TCAGGAATGACGTTCAATTTTCATAAATTCAAGACCTATTTGACTACGGT AAGtttcacaaaatttttgaatagaaATATTTTCTGTCTATTAAGCCTCC GTGTAACTGATAGCAACACCAACACACACAAACATTGTTTAATCAATTTC GTGATCGCTTTTCTTTACTGTTCGAATAATTATATTCATAGAGTTTCTGG TAAAAAAGACAAATCAAAGAGATTTGAAGCTCTCTAATTTGATATCCAAG GGGCCttggattttcattgaataagagagctaagtttggattcgcaaaaa ttggattccttaaaagttgttttcttattttcagcatgaacagttcctta acaattccttattttttggaccattttcagcctccagttccttataaacg tgttccttattaaaaaaaaacgtgtactatgTTTCCCTTTACCGAGAGAG CTAAATTGAAATATGACAGCTAAAAGCATCAGgataaacaaaatcaaatc ctTTTCATTTTCAACCCAATATATATCCAGTATTATTTCTGTTACAACAT gatttacttttcattttttagccatttgacTTCAATAGTGTTATGATGTA CCCTTTCGATGCATTTACAAAGAACGGTCGATTGACTTACGAACCGAAGT TACCGCTCCTCGAGAGAGAGAAAGTCggtcaaagaaattcattatcACAA ATCGATATTCGACAGTTGAATGGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022628TCONS_00022628Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022628-proteinTCONS_00022628-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000429supercontigsc0000429:200791..210165 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0 0.06 0 0.21 0.23 3.48 3.06 1.61 0.66 3.17 3.04 3.24 2.56 3.4 6.37 1.23 1.22 0.06 0.18 0.82 1.28 2.86 3.26 4.38 5.84 1.09 0.47 0.06 0.24