XLOC_011898 (gene) - C. hemisphaerica

Overview
NameXLOC_011898
Unique NameXLOC_011898
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000380:171861..175555+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011898 ID=XLOC_011898|Name=XLOC_011898|organism=Clytia hemisphaerica|type=gene|length=3695bp|location=Sequence derived from alignment at sc0000380:171861..175555+ (Clytia hemisphaerica)
CAACATTTGAattctattttcattttgagatgTTTGATGAGTGTGATGAT
TTTGTATTCTAACTTGGTAAGTACGACCTTGATCTCTGCACTTAATTtac
ttttcgtcaatttttaaCCTGAAAACCCATGTACAAATTTGATGATTAAG
AAAATGCGCTCAATTTAGATTCTAATCAACATCTTAAAATCTACTCAAAT
TTATGAGCATCTCTGCGTCAGTGACCTGGTAAGAGTTTTTTAGCCagtta
aaataataaaaatttggaaTAAGGATTAAATACAGATTGAATCACCTATT
TTTCAGGCTTGCATCATCTTCCAATTACTTTACATTGGATTGGCAAAGGC
ACATAGACAGTATGCTCATTACAAAGGTCCTAATCCTTATCACCattttt
aattgtttatttGGACGAGTTACCAGGGTAACTAATTCTATCGAATCCCT
TGGTAACTACAATGTTGTGTTACTCGTCTCCTTCAATTCGACACATGTGC
CGTTGGAAATCAAACGGATGCATTTGAAGCTTCGTTACTTCATCGGGCGC
CAAATGGTCTTCGCAACACAAACGTGTGTCACTATCGGCTTCGCATCTTA
TAACATCGAAGATCAGTACGAAAGATTACTCTCCATCCTGGTGCATATTC
ACCTCGGCCAAAGATTCAATACTCCAGTTACCAGACCCACCAATACAAAA
TATGAATCGAACCCAAAATGTTCACCCTTTTGTAGTCTGCCAAATATTAT
CAGTGTTATTTCCTATCTGCCATCACGATTCACCACTCTTACCAAAAATA
CTCTCTCCATGGAAATGATAGGCTATTTCCCTTATACCACGGATAAATTT
GACATGTCTTCAGGGCTACGAAGGCATTCAAACGATGAATCTATCTTAGA
CATGGACAGTGACAAAGTCTTAAGAGATATTCTTCAATTGCAAGTCTCAA
AGATTCTTCTTCTCAGGTTACCAAGCAACAATCCATTACTGACTTTATAT
CATCGAAAGATGTATTGGGACATTCTAAAATCCTATCCACGATTTTGTCT
TTTCCAATACGATCTTTTAGATCTTGTGGTGGACAAAATGCTGGATTTGA
TCCATTTCATGGATGATAATGATATCAGTATGGTGTTAGGTTGGTCAGAT
ATAGACTCTTGGTCAATCTTTGTGAAGCATTCGCAATCTAATCCTAACCG
TGCTTGGTTCTGGTACCTTGAATCACCCTTAACGTTAAGCTCCTTGAACA
AATATTTCATCTCCAGGTCAACCCATTTGATTCGTTTCCATCGATTGTTC
GCCTACCAAAAGTTAAATCAGATGTTCCCTTACTCTTCTATAACACATTC
AGTTCAATTCTCcgatttgaatgaaattttaaaagaccCGTGGTTGAACT
CAGGTTCTGATGTCATTGATCTGAACAACCCTCATTTACTTGGTCCAAAC
AGCTCTTTACAAATTGAGCTCCTTGAATCGACGATCCTTCCTCTCTGGTG
GTCACAGCCTTTTAAAAGACTTTGTACTTCGACAAGGGAATTCTATGATC
TGCTTATGTTTCTCTCACATTCAACCGTTGTTGAAGTATTTACTTATGGC
TTACCGTATCGTTCCCCAGACACCCCACAAATTTATTTAGACGAAGTATC
ACCACGTGTCAAACGACCAGCATCCGTCAAAACATGTCCACCAGGGTTCG
AACCTCATAAAATGGAATTCAACGGGACACTCCCCAGTTCATTACACTTT
GATTGGAGATGTTTGCCTTGCCCACCCAAATCAGCCAAAAGTACTTACGG
CAGTAACGCATGCGCATTATGCGAAGGTTATCTCATCCCGAACACCAAAC
AAACAATGTGTTTTGATCCTTACATGGATATTTACAATACACCTGGTCGT
AGCTTTGGTACCATCTTGATTTCGTTTTCAGACATAGTTTGCTCCGTAAC
ATCGTTGTTAACGCTACTGTGTTTCGTGATACGTCGCAATACACCGGTTG
TCAGGGCAACGTCTTTCGGATCATCAGTTATCTGTTTAGGATCTTACTCC
TTCTTGTTGATATCTCTATTCGTTATCTACTTACAAAAACCAACACCCAC
CATTTGTCATGCGCAATATTTCATCCCTGGTATTTGTCTGTTGACATGTT
ACGTCATCTGTTTGTCCAAAACTCAACTTATCTTATACATCTTCCATGCA
AGAATCCGGATCTCCCGGCGCCAAGTCCGTATCACCAAAACTATTAATAT
TTTCATCTGGTTTGTCTTGGTGGTCGTGTACACACTTATCACACAGCTTC
TCAGTCTTTTCTACGGCTACCCTTCCGTTAAACAACAGCTCCATGAGGAC
GAAAAGTTGAAGGAGATTTACTGCACCAATCTGCCGCACTTTAAAGCTAC
CATTGTTATCTTACTCATGGTGATCTTGACAAGTGGTGTCCAGGCTTTTC
GAGCACGAAATCTACCGAAAATGTTCAACGAAAGCAATCGATATTTGTAT
TCCTGTTTCACAATCGCTGTCATTCTATTGGTTTATTTCCCAATCTCAGC
CGGTCAAAAGAATCACATAAATATCTCAATGGTCAATTGTATGGTCATGA
TGTTGCTCTCCTTCGTGGATGTGGTCATTCACTATTGTTCGCAAGTCTAT
CTCATTGTCTTCCATGCTGATGAAAATAACGCACGCGAGTTCCGCAAAAT
TCGAATGAAAGCTGTCGAGAAAAATGCAAAGAAGGTCTTTGCTTTTGAAA
AATGAGACAAAACTTCATTGTTACTTAAAGTTCGGTGCATTTTTTTCACC
CGATACAAAGAATACCAGGAACCTATcatattttaaaactttcttttgtc
TCTGGACTtgtatacagttgacgctctctaattcgacatcctactattcg
atacgctccattattcgataatattgaaagtctttgtcaacaagaaactc
ttataaacgacgctctactattctatacgctcccttatttgacaaaaatc
ctgaaatcgagttagagagtgtcaactgcaTATTGTTTATCAGAAGAAAG
GCTTACTTAACGTTTAGCTCAAGCTGAAGCGATTAATTGGATAACAAAAA
CTTGTAACAAATTGGTAATTGGGTTGGTTTAAGTAGAATGTTAGATGAAC
CTTTATCTCAGGGACATGGTTAAAACAATTCTACATCATTTACATGAACA
TGTATGTATTCTAAAGTTTATGTTTATTGCTTACTATAACGTAATGTAAA
ATATACAATAATCGCCTAACGTTGTTATAAAAAGTGTCAGCTCAGCTCAG
CTCAGGCTATTCCACATTGGCGAGATAAATAGCCTAAAGTTCCTGTATTG
ACACTGTTTTGACCAAACTCGTAGCCTAGTCGCTTAgtttgctttttatt
aattctaGTTTTTGGTGCCTTTTTTATGTTAGTAAATGTTCGTTATCTGA
ATAAAGATAAATTGAATTGCTATGAAAAATGTACAAAAGATATTTACAAA
ATACAGTGTGTCCAGGAAAAAAGAAAGTTGTAAAACCTCATACCGTTGAT
ATCTCTGGGAGACAAAAATCTTGTGTCAAGGATTTCTTTATTCTCTCATG
CTTTTTTCTGAACACACCTCATTATATGACTAACTTGAATTTGTCAATAT
TAAACTGAAAATATAAAGAATTATCTAAATAAATTGCCACTTAAN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021251TCONS_00021251Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021251-proteinTCONS_00021251-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000380supercontigsc0000380:171861..175555 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03	0.05	0.1	0.06	0.94	0.57	1.18	1.21	0.68	0.61	0.42	0.53	0.41	0.32	0.21	0.3	0.63	0.61	0.28	0.5	1.5	1.49	0.57	0.5	0.38	0.68	0.13	0.22	1.82	2.43