XLOC_011576 (gene) - C. hemisphaerica

Overview
NameXLOC_011576
Unique NameXLOC_011576
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000359:302494..309820+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011576 ID=XLOC_011576|Name=XLOC_011576|organism=Clytia hemisphaerica|type=gene|length=7327bp|location=Sequence derived from alignment at sc0000359:302494..309820+ (Clytia hemisphaerica)
TTTTTGGCAAGCATGACGTAATGTCTTGTCCATCGCGTACTTTCcccttt ctcaaattttcatggAATCACTGACAGTTGAGTATTTTTTTGTGGAAGGG ATGAGTAACACTTTCTTTGAATGTTGCATTTTGATTTTCGTAATACTATC ATTGCCCTACTGTTTCACCATGTCACAGTATCAACAAAATCCAGACTTCA TTAAAGAAATCACAGGCATCAAAGATGTaagttttgttttaatttttttt actgctAGCTATTAACATATAGCATAGCTACTGTAAGGGACTAAATGAAA CTAATCTTCTATTATATTATGCAAGCGTGTGTTACTCTTGCAAAAGTAAT ACAATCTGTTTTTTTCCATCAGAATGGAGtttgctggagtttttaattat tccaCATAGGCATTGTTGTGATTAGCAAAAGGTACTATATTCTTACTCAA TTacaattgggccattccagaatttgtctgtaacaggatTTCGGAggtca aaagttttcaccaaaattcgaaatctccaaggtgagagaagaaaatgtat gaatttccaaggcaaattgaattaaaaaagggtggattttccgatgcatt ttgcaaaagtacatggattttcatcggaatttccgaacaccactggaaaa gaaattatttctgaggctataaaaaattaaaaaatgcacgtcaTCCGACG GGGGGTTGCAAATATTTTCTGGGATGGCCCATTTTATATTGGGTCACGAG GTTCTAATGAGGctctaaatagacctttttttaaagaggcagccatgttg aataattatgtactccagagcataaaaacaatgatacagccgtGCATAGT Agtatatcatgcatattttaaaaattatgcatggctgtatcattgttttt atgctggagtacataattattcaacatggctgcctctttaaaaaaaggtc tatttcgtGGGTTTTTCTAATGTccacatccctcttctaatttggACACC ctttttagagataggaatgaTAGGAATGTCTAGATCTGCCCctaaaatcc agaaaaaaaaaagccagaaaaacaggtaaatatggccagttttaaatgat tttgtccctgaactgtagatattatcaaaattttgcccCTGTTCTTGAAA AGTGGGCAATCTCTGCCCTCGAGATCTCAATGATTTCTTCCATACTCTGA AAAACTGgtcactaagcaaagaaaagttGTTTCCATCATAAGTCCTTGGA TTTCACGATACAGCCCctctttttttaaatgcagTATCTCTGTTTTTATG ACAAGGGAGATTATAGCATGCACATAGGAAAGGTTTGGATATTATCCCAG ctatatttttaaattgaattcttgtgcgatcaaaattgaaataaagatGG CGGGTGAGGCCAAGGATGGAATTGGATAAAATTCCTACAATCTTGCAACT TTCTGActcaaaagatttggaaaagttAAGCAGTCAGTTGGacgactttt gaaaaaatacccactattttgttttgatgactgtttttaaaaactACAAT GTTTTAGCCTGTTTTAGCAAGCTCAACATTTACTTCATAGCAATCCAGTC CTCACTTTTTATTCTGTCATAAGATTCACTCAGTCTGTCTGTGTCAGTCT CGAGTGAGTTAGGACTTGTCTCAAAAACATAGCAATTACCCAAACTTTTT GAGACCTATAAAAGTCATATAGACTTTTTTTGTAGGGCGCAATATCATAT CTTATAATTAAAAGCTCTGGCATCAACAATCTGGAAACAAGGTAATATGA CATACTGGATATCCTTGCCATAGcctaatcaagtttttgaaattgaatcT TTATGCTAGATACATCTGCCACATATGCCTTGTTTTCCAAACTGGTCCAC AGCATGTGAAAAGCAGAATTAGTAAACACAGGGGAGTttaattagtacta gtaataacatggtttagagggtgatttgggattaataaccccgaggtatg aaaacatttcaaaatattttgaagtgttttcaatgaaacgaggggttatt aatccaaaatcacccgagaataccatgttattccgcgttaattatatggt caaaaaaagaattcgactgacactcttattttgattggcttaaaaatttt gtacgatattttgttaaccaatcaaaatattgtATGATACTTTTcattca accaatagaaatttttgtttacatcagggcgattacaaatAAGCGGGgtt attacggatttatcgcccgctcgtcctttacaaatctaagctaaatgtaa tcatccatataattaattaattaatcattattttgatgctaGAGTGTAAT AATGATATTCAACATGACGTTGACTTAAGATTATGGGTAATGCAAATTAT GTTTGACCCTGTGCTTTTTAAAATCCTCTTGTTAATACAAAAATATGTTT GAGACTTGACTTTTTAACTCCCCTGAGtacattatttattatttttccaa CCAGAACATTATGTACTTGTTATTAGCCTCAGGAGGTTAAAAAGGAATGA CACTCACTCCAATATTGCAATGAATCACAATTAGGGAATTTTCTTACTGG AAtattaaattttgataaaattccaTTTACCTGGAACTCCAATCTATTAT AATTGGGTTGgatttcagaaaatttaattttttaagtgAGTTTGtgtctt tttcatgaaaataaatCCCTCAAAGTCATGTAAAATTACATAGCAAATAC CAATAGAATTTCTAGCAAAAAGGCTTTCAGCTGGTAAAACCATGTTATTG GCAAAATTGAATTCATACAAAATTTGACTAGCAAATCCAGAAAGTTTAAT GATTCttctaaataaaatattttgcacaaatTTACTTTTAGAAAAATGGA GAAAGACTTTATCAAGTTGTTTGGAAACAAAACAGCTGGGTTCCAGAATC TCAACTCCGAAGTTGTACAGAACAGATTGGAAAGTTTGAAGATAAAAATG TCGATACTGCTGCAAATGGTTTGAGTAATCTTCAGATTACTCCTCCTAAA AAGGTGGCCAAAGAAGAAAAGGTGTGCTCTCCAAAACCAAAGGATGGAAA AGAGGAAAGAAAGCAAGGTAAAAAGATTTAGTATCCATTGAAAACAGAAA GACTTTGTTATGTTGTCTTTGGACTAACTTtagatactttaatcgtagaa attttagccagactaattttagcgtatattagcgagtcaggaaaatcttg attttttttggatttattttagcaaatcatgatttcaaaaaatttcgcgc ggataaattttagcgaatactcgcattacattattgactgaatttgtttt ctagcatttctttgcactgaaacccttcctattgataaaaatgtatcaag gcaatataaccagaaatttcacGCGGATAAAtcttagcgatctgtcgatt cagTGTGTTTTAGCGAGaattattttagcgaaaatagggaaaactcgcta gaacgctaaaattagtctcgctaaaacttctacgattaaagtagttgGAA AAATTCAATCAATAAAGCCTTTTTTTAGattgtgatttgaaaatatatat ttttgaatatatttttttttatttaatatttttttaaagatgctGTTTTA AGACGCTTACCATCAACCACCTCTGACATCAAAAGACACACAAGCGGTAA GATTAATAACGTAACCAATTTGGCCAATTCGCCAATTTTTATACAATTTG GCAAAAAGAAGAATTaagcaaatattttaatttgggACGAGTTTATTCTC ATGAGTGACTATTTGACTATTTTTCTTATCATTTCGAACCAATGCTGGGT AATCAATTATTCAACAACAAAAGATTTATTAAAAGAAGCATTTTCCAATT TCACTCTCGGGATGATAGCATGATAGCATTGATTTTTTTTTTTTTCACTT TATTTAACGTTGGAAAATTATAAAAAATAGTAACTTAATACTAATACAAT CCGACAAACTATAATTAAGATGTATAAAAAATTCTATAATATATATATAA TATATATTAAAAAAACTACACTAGATTATGGGTAGAAGAGGAGATTCATC TACATGAGATGGTAGTCTCATCTAGTTTATTTTTAAAATCCAAGATAACA CTCGGAATTTCATTCCAAGTCATTGTGGCGCGAAAGTCAAAAGAATCGGT GTAAGTATAGTTTGGAATTTCAAGCAAATCTCCTGATCTTAGAACATATG GTATTTGCTTTGTTTCAAAAATGTCATGCAAAATTTTGGGGCCCAGTTTT CTTTAGATTTGAAAACTTTGCAAAGCATAAGTTTAATATTTTGGTCATGA ATTTCAATCGAATTAGATCTAACAAGAAGTTTTTCAAAGGACTCGGTAAA GTTTGAAAATCTTGCTTTGTGGGCTCTGTAATGCGTTTTATTGATTAATG CATGTGCAGTTTTAGAACAAAACATCCATATGAGTGGAcaataattgaaa attgacaTAATAAAAGTGAAATATAAGATGTCACGTTTTTCTTGGGACAA AATAGTCCTTATCCTCATTAAGGctttaattttgttgtttgcatTTGACG TAAGGTCTAATAGATGAGGATAAAAACAGAATTTGTCATCAATCAAAACT CCTAAAAGTTTTACAATTTCAGAACTATCAATAATATTACCATTAATGAT CAGAGAAATATTACATTTTGGACTACCTGGGAAGNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGACTACCTGGGAA GATGACTTGAAACTTTGCTGAGTTTGCCACCAATGAATTTTGTGCATACC AATCTAACATTAGTTTTGCTTTTTTGGAGAGCATAGTGAAAACAATTTCA AGCGTTTTTCCTGCCACCGAAAGAGTGTTATCGTCAGCAAAGTTACAGAT GTCATCTTCATTAAATATGATAAACATATCAttaatgaaaacattaaata aaaTAGGTCCTAATACTGACCATTGAGGAACCCCAGGTTTTTTAAAACTC AGAAAATATTAACCCAACCTTTTAAATGGCTTATTGGAAACCCAAATAAC AGCAGAAAAAGGTTATCGAATATGAAAGAAAATCAATCCAGAGCCCTCtt gttttttaggtttttttctGGTTGATGACAGTACTAAAAATCTACTAGTA AACGCTCTTGTATTTCCGCATCATCTTCTGTGTTACAAAAGTTTGATTCT CTTTCTTGGCAGATAAATCAAGTCCACCCAATTAATAAAGATTTTCGTCA GCTCTTGTGACTATTCTTCTGCTGTTGTTAAAATGAAAGGTTTTCAATTT CCTGCTATTAATCTTTCAGTTCTGGAAGGCATCAAAACATTAACTCCAGA TTTTCTCAAAGACGAAAATAAGAAGAAACTTATAGATGAAGCTTTGATGA AATTCAAAGAGAAATATTGCAATCCACCAAAAAAGGACGACCTTAAAGCT GCAAAGGGAAAGTTTGGTATTGTTTTGGAAGATTTGAAATTGTCtttcaa agaaaactttttaacgtGTAAAAACACTGAGTACACTGGCTCAACATATG AAGGTTTAAAGATCTCAGGAGATGGACTCGAATTTGACGTTATGTTTTTG TTCGAAGGTGGAGAAGATCTAAAAGTTTTGCCAATAAAAGATGAAGTGGG CTTTGCACATTTAGCTTTAATTGATAAGGATATTGTGAAAGAAAATGCAA TTACCAAATCAGCTGATAAGGATGGTAAAATTCTGTCAAAAAAACTGAAA GACAAATTCAAAGGGACAttacaaaatttcattaataaTTCTCCTCAATA TAAAGAATTGATTACAATGAAGGAGCACGGTCCAGCTATTCAATttgata tcaaaagaaaaaaggatGATAAAGACCTTTGGTATAGTGTTGATTTGTTA CCCTCCTTTGAAGTCAAAGTAAATGAAGGTAAGcaacccaaaaagtcttt tCGCCTTTAACTAATTTCCATTccaaagaataattttttttaaatacagc aaaattaaaatagctttgaaaagtttcttttttgataatcaattttcccg ttttcaatgaaaatgctaTCTTGAATATTTAGCTCAAATCTtcataaatg tttttttgctttttgtatCCTTGGAATTAAGTTAATTTTCTTCAAGTGAT ATTCAAACGTTTACAAAACCTTCCTCAAGTTTAATCGTTGATTTCatctt attattatttatttttgtttacagAAAAACACATTTATGTACCAAAGAAA ATTGGAACTGATCAAAATAGTTGGCGTAGATCATTTTCTAAGGAGGAGAA AGATCTCCTTCGAAATATTGATTCGGGGAACGGAAACCGAAGAGAGGTTG CTCGcacattaaaagcaatgatcaAAAAGGAATTAAAAAATATCCCATCG TATGCTATCAAAACAACTTTGCTTCATATATGTTACGGTGAATCAAAAAT AGATGAAGAGTTATGGGTACCCCAAGAGTATACAAATCGTGTTTTTGATA TGCTTGCATTACTTGAAGGCTACTTCAAAGAAAAATGGCTACCAAATTAT TTTCTACCAACTCAGAATCTGCTTAAGAATATGAATGACANAAAATGGCT ACCAAATTATTTCCTACCAACTCAGAATCTGCTTAAGAGTATGAATGACA GAAATTTGGAGCAAGTTGAGAACCGTTTGAGAGGATTACGAATGAGTGAC AAGAAGTTTTTAAGTTTGACCAAAACCGATGGTGATCTGGTGTAGATACA TTTTGATTCTAAATGAAAACTTTGAAGAGATTCATGGTTAAAGTATAATA TCTAGCTAGCCGTGTTTTTGTGTATGAGTCTCATTCTCAATCcaagtatt tcaaaatattgtgaaCAAAATGTTTACTTCTAGATAAGGTCATGAGATAA AGGAAATGTGTTATTGGTCAATACCAGTCAGTttatttatatttgttttt tattttcaaagcttttaaTTTTGTAGATGTGGTTTGATACCATTTTAAAT TGTTGCAGCTGCCAAGCAGTAATTGCAATCAAAAGTACTagtgaatattt caaaatttgtatttttaaaaaggtCGATTAAAAAGAATAGTAGTTGTTAG TTTGCTATTGCTTTCTtttcattatttatgacgtcataatttgaaaaaag ttgaatatctcaagaactaattctcgaaactttatgaaatttggaccaat gatcgaacttatcaagaggaggagaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020637TCONS_00020637Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020637-proteinTCONS_00020637-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000359supercontigsc0000359:302494..309820 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.62 9.4 5.52 5.27 7.63 4.87 8.24 9.42 5.68 7.96 8.72 4.48 12.83 9.03 8.77 12.56 5.8 5.51 10.64 12.48 6.67 5.92 11.56 11.56 11.09 13.93 9.23 10.27 9.69 10.19