XLOC_011480 (gene) - C. hemisphaerica

Overview
NameXLOC_011480
Unique NameXLOC_011480
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000356:289994..299740-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011480 ID=XLOC_011480|Name=XLOC_011480|organism=Clytia hemisphaerica|type=gene|length=9747bp|location=Sequence derived from alignment at sc0000356:289994..299740- (Clytia hemisphaerica)
CAACAATTGAAATAATTTGATTGCAATGTCATCAGGTAAAATCCTACCAA
GAATGAACAAGGTATGAGTTATATTCAATTTTCGTGGTTCCTAAAGTACT
CTTGAATTCCCACCGCGTTTCATTATGATCATTATAAAATGGCTGGTTAT
ACAGGAAAGAAAACTCTTTTGCAATACCTTTCTCACAGACCCAGTAGGAT
TTTTTCATCCAGTGGGGGTAAAAACAACGAACTGAAATCCGATGGGGATT
GATATTCCCATATCTTTCTTTTTTGGGTGTGAATTTAAATTCAACTGTTT
TCAAGTCTGGAAATTCGGTTGGGATGGGAAAATAACATAATATTTTGCAG
TGAGGATTGGAGTATAATTTTCCACTGGGGACAAAAGTTTTGGTCAGTTT
TCCAATGGGAAGGGATCCCATCAATGGGGGGGGGGGGGGGGCGGGTTNTA
AAATTATTCGGTATTTCGGAAATCGCGAACCCCGTACGCCCCCCCCCATC
AATGTGAAAAGGGGGTGTAATAGAGTTTTCATTCGAAGCCTTTGTAGTTT
GTATCTTACACAGTTTTCGATTTGTAGATCTGATTATTACTCAAGATCAT
GTTTAATAGTTAACCAAGCCTTATATTTCCCAAGAGTTACATAAGATTGC
ACACTGATATAACAAATATGGCAAAGATTGCTTTTGAAATCACACTTTTA
CCTTTATTCCCTAACAATTTGACTCCCATATAAAACATTGAGGAAATTCC
GTAAAACACTGAAATACGCACCGCATAAACGTACTTAACTTTTTAATGTA
CGCAAAGTTGTATTGTCGTACTGTGTAAGAGGAGTTTGGGATGTGATAAT
AAAGATTTTTTAAATCAAAAGTATAGAAGAATTTATTTTTCGACTACGTA
CGAGAATGAGATAGCACTTTTGATTTCCATTTTCAACTTCTTATCACTAC
TTAGGATCTTCATTTTTATCTTGCAACTGTAACAACACTTTTGTATAAGA
AACATTTCGTCTATAAGAAAAAGCTAATATCAACCAAAAAAGCATATGAA
CGCAGTTTAGAAGCTGTAATCAATCAGGCTAGGGTCAGAATCAATGGAGT
TATGCTATGAATATATTAGAAAATAAAATCTGTAGTGCTAAAGTATCTGA
AAAGTTGATTTCTTTCTTCAATTTTTTTTTTCAATAATTATCACAAAAAC
CTTTTCAAAAAGCTCAAAAATCATAATGCTCTTAATTATCTTTTCAAACA
TTATATAACTAACATTCCAAAAAATTTTAATACACACTTCAAGCTAAAAG
AATTTGATTTTTAGTATATTTGAAAAAAGAAACGAGTTCTTCTGATTTCT
CCATCAACTTCAGCCGATCTTTAAGAAAGTTTCGCCAAGGAAGACTTTAT
TTCAATTTTTACTTTTCCAGTTTTTAGAAAACCATGTTGTGTAATTTTAC
ACAGGCCACTCTTTTGTACTGTGAAATACTTGACAGACTCTTCTTGAATA
TTCTTAAGGAAAAAAGCGGTTTTAAATCTTCATTTTGGTCTATCGATAAG
GTATGAGGGATAGGATAAACATTTTCAAATTTACTTCACATTTTCTACTT
GTTATTCTGCTATTTCTTTTTCTTCGCCCTTCTTTATGTTTGAGCTTGTC
GAAGAATTTTGACTTATTTTTCGGAAAATATCTCGTTTAGAAGGAGTGAT
TTTTTATAATGAAAAGATGAGGTTGGCACCAACTCCAAGCATTATTAAGA
GAGCTCGTAAGGTTTGTGTGCGTTCGAAAAACTTATCAAACCAGCAGTTA
TTGGCCCCGTAAATTGATGGACTTTATATAAAATTCTGATATTTTGAGGG
TCGAAAAATTTTCAAAATGAGGGAATTTGAATTTATGGCCTGTAGGCATT
CCTGAAATATCTTTTGCTATAACAAAATATATTAGTTGCGTTGGCAGCCT
AGACAAAATGCAATCTTAAACTCTTCATAAACCACAATCGAAATTTGAGG
AAGCCAATTTTTTGTGGTACATCTTGTTTACATTCGAGTTGGTGCGTTTT
GTCACCACAATACACCTGTTCGACCGTAGCTACCAATTGTGGCGTGGGCA
TTTTTTTGTCCCTTTTACCACCCTAAAACCGTCCCAGTCTTTTTTTCGCA
CGTATAGACAATAGAAAAAGGTGTCAAAACAGGATTGGATCGAGCTTAGG
GGAAATATGTCCGCGCAGCAATTGGCGACTACGGTCAAAAAGGTGTATTA
CAAGTGTAAAATTGACTGAAATATTATATCAATTTCTATCATAGAGACGA
CAACGAAGAAAGTTGACCAACTTACAAAGTGATGAAAGGCTTGTACTGAA
TGTCGGAGGATATCGTCACGAAATCATGTCCAGTACTATTTCAACTTCAC
CAGATACTCGGTTATATTGGACTACACAGAAACGAAGCCAAAGTCCAGAT
TATGATGCTACGACCGGGGAATTTTATTTCGACCGGAATCCAATATGGTT
TCCGTATATTTTGAATTATTACCGGTTAGGAAAAGTACATTGTCCGGTTG
ATGTGTGTGGAGCTCAATTTGAGGAAGAACTTCAGTATTGGGGTATCGAA
GAACGGTTTATAGGTATGTCAACCTGTGTGGATGCATGGAAAATAAATAT
TTTATTTTTTTTTATATGAAGTTTTTATGGATGGACCTTTTCAAGTCAAC
TATTTCTGTGACACATGGGTGTTAATCTTAATTGGGGATTGAGAACTACA
TTGACTTATTATAAAAAAGCAGTCAAATAAAAGAAATTTGAATTAGAATC
TGCTGTTACTTAAACATGTTTCCATTCTTTATCGGTACAGATTCTTGTTG
TTGGGACAGATACAACAAACATAAAGAAGCCAATCTTAAGCTCAGCTCAA
CAAACGAAGATGTAGTCGATGAAGTGGAACAACAATCGATGTTATCGGAT
ATCGAATCACAATTCATCGAACATGAACGTTTTCAAACGTTTATCGATCC
ATTAGGTGATACAGAGCAGTGGATGTTTGTATCACTTTTCGAGAAAATTA
AACGAAAGTATAAATCAACTATTTGGAACATCCTCGAAGAACCTAATTCA
TGCAAAACTGCTAAGGTACGACTTTTTCAACGTTTAGAGTCACCACTCTA
AATATATTTCATGGAAAGATAATTTTCTTAAATTTGAAAACTGATAAAAT
TAGTTATTAGATATTTTTACGGAATCGTTTTTGTTGGTTCTTAATAATGC
CATCGGGAACAGAAAATAATTTCACTGCGTGGCCAGAGTAATATGGAAAG
TGTTCTTAAGGTTTTTTTCCTAGAGGCGTTTGATACTTGAAAAAGGTTCT
GCTCCATGGTGGTTGCATCTGTGACCCTTGCTTTTTTAAAAGTATTTTTT
TCAAGAGCTCCTGCTAATTTTAAGACTGTTTTTCTCTCGATCATATATAA
AATGAATCCCTCCGTCCCAAACCAAACGATGGGGAAATCATAATCTAGAT
ATGGCACTAGAAAAGCTTATCGAAAGTGCAACTATCAAATCAAAGAAGTA
GAAACTTGCTAAACTTCAGATGGTGCTATATTTGGTTAACCTTAGACTGG
AGTCGTTCATAATGCGTGTAATACAGTAGTATAGGTGTTATATGATAATA
CGATTATTGTTACGGGATTTACTTTGTATAAACTAAATTTGTTCCCTCCA
TTACTTGTTGCTTTATTTCCATGTCTAAATTAGTCGTCTAGCTTGCTAGA
CTAGGTTGACCTATACAAAAGATTTTTTTTCTCTATTTGGCTTTTCCCTA
GCATATGCCTCTCGCCCCTTTTTGGTTGGTATGATGTTAGTTGCATTACA
TTACATAACCTAACTGACTTCAAGAGAAACCTTTTTTCGCAATAGAGATT
AAAAATAAATCAATTGCCAAAAAAATAAACTAATTCCAAGCTGATACTGT
CGTAAGACAAAATGAAAAAAAAAACCTCAAGAAGGGCAAAAATCAAGATA
AAAAAACAAGAAACGTTGCTTTTAGAGTTATGTTCAAAACATCACACATT
ACATAATGATAAAATTCAACATAACCCAAACTCGGGTTAGAGGAACGCTA
AAATACAATTTAATGTACTTTTTTGGTTTCCAGAATTTATGTGAAAGCTT
TTGGAAGAAAAAGAAAACTTCAAAACTCGGCGACAAATTCTAACTTTAAA
AACTCTAAAACACAATGATGAAGAATAAAAGTTTATTTGAGTCCATTCTG
CTTCTATGTGGGAACCCTTCTAAGTCTTATTAAGTTGACAAAATTCCCAC
ATTTTAGTGAAAAAATGCAAGCTTAAGGCGAACTGGCTTAAATCAAATTT
AGCAGCGATGGTCGATGTTCTCTCTAGGATGTCACAACGTAAACCTTCGA
GTCCTCACTCCTTTCCATTTTCCGTTCAGCTCGTAGCTAGTCAACTGACT
TTGGATCTCAAAACAATAAAAATACTGTCTAAAGAAGGTACTAAATTACT
AGTAAAAAAACAACAACGTAAAATACTGTCGCTAATCTAACTAAAAATAA
AACAGCCTTAATAACGGCTGCAAAACTCCGGTAATTGTCATTTTTGAGTA
GCAAACCATTATGTTAACATCTTTATCGTGGTCAGCCTTTCTTAATATAT
CTCACGTAAAATTTAAAAGTAAATATATCCTAGTAAGTGCGAGCACAAAC
ACAAACCAAATTGGGAAACCAAACCGGAAAGATCGGGAAATGGAACCCGA
CTATCGCGAGTTTAAAAAGTATAACTTTGATCTCTATATTTGTTTTTCTT
ATTCATATTTTCAGTTGATCGCTGCCATCTCCTTGATTTTCATTGTCCTT
TCGGTCACAACATTTTGTTTGGAGACATTGCCACGCTTCAGAAACCAAGA
TTCTCAACAGTATAAAATCATTGCAATTATTGAAGCTATTTGCGCCACCT
GGTTTACAATTGAGTACGTCCTGCGTTTGATGACTTGTCCAAATAAACTG
AAATTTATGAAGAACATTATGAATTGGATAGACTTGTGTGCAGTTTTACC
GTTCTTTATCTCAATCGCTTTACCCGATAGAGTTAAATCCATTGTTGTTT
TACGTGTTGTTCGATTGATCCGTGTTATTCGGGTCCTCAAATTATCACGC
CATTCATTTGGTCTACAAATTTTAGGGCATACTTTGAAAGCAAGCTGTCG
CGAGCTTTGCCTTCTCGTTTTTTTCTTATCAATCGGTGTCATCATATTCT
CAAGTTTGATTTATTATGCTGAAAAAGACGTCTTGAATACCAAATTCACA
TCTATTCCAACCTCCTTTTGGTGGTCTATTGTTACGATGACAACTATTGG
TTATGGAGACGTTGTACCTCAAACCCTCGGTGGAAAAGTAATCGGTACGT
TATGTGCTCTATGTGGTGTTTTAGTTGTCGCTCTACCGGTACCAGTCGTC
GTTAGTAACTTCTCCTTATATTATTCACACGCTCAATCCAAGTTAAGATT
TACCGAGAAAAATACAAGAGCCAATGAAAATAAAGACCATGTATCATATT
TCAATACATGGTTTAATAACCCTGGTGTTACTCATCGATCATCTATGGTT
TCCAACGCTTCAAGAAATAGTTGGTACATGGCAACATCTCATCCAGCATC
ACCTTTGAAACCGACCACGCCCCAGCTATGTTATGAACATTTTAGCCCTG
GTCTAAGCACCTGTACATGGCGGAGCTCTTTACCAAACAGTCCATTTTTT
GGCTCAGATATGGAACAATTTAAGAATAGAGAACGTAAATTATCAATGCC
AGGAATCAATGAAAGACGGGGTTCATCAGATACGAGAGAGGACGGAACTG
ACCGAGGCCGTAAATCAGGAAACGCGTTAAAGATACCTGGTAGTCGTTCT
AACAACGCAGAACTTTTTGATTTCAGTAAAGACAAGTTACAAAAACGTTT
GAATATTTCATCAAATATGTATGGTTCTCAGTACTTAACACCGAATTCTT
ATCATAGCTCTGCTACCGCTACCCCTTCCTCATCCAACAGCTACTGGGAG
AATCCACTATCAAGTACTTCAGGCTATAGTGAGCAGTTAACTTCTTCAAC
AACTGTATCTCCAAACTCTACAACCCACAGCTCAAAAGCAACACCAAATA
TTATCGCAATGCAAAACAATGCTTATAACCATCTTCGAAGAAGCTCAGTT
TACACTGAAGAACATTTTTCAACACCACGCTCTAATGGGAGTTACAGGGA
GACTTGGAGTAAAAAAGTAAACACAAAAAATCTAGAAGAAGTATCTAAAC
GATTAGAGACTTATTTAAAATCATGTGACCCCGAACGAACCTCATTTCAA
CTTTCATCTATCGAGAATTCTTCACTTTGTGCTCGAAGAAAGGCACGGAA
ATCAAAAGATGAGACTTCCAACGATTTGGTTATACCAATATTTACGATTG
ATGGACCAAGTGACTCTTCAAGAGAATCATGTTCCCTTAAGGATGAAGAA
ATGTCATGTACAATCATCCCCGTCTCCCCAAAAGTTGTTTATCACAAGAA
TTCACCTTTGTTGTAAGTCCATGTTTTCAAATTATATTGGACTCTTCCAG
AAAATATCCTTACATGGGGATAGATGATTTAGTGCCCGGGGGGTAGTGAA
AAATCTACAAAACTTGTCTTGTCCGGGGGGGGGGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGGGGGGGGGTAAATTTCCAAAAAATGTTATATCCTCCAACC
CCCTCCCCCCATATTCAATTTTTTCTGGAAGAGCCTATTGTTTTGAACAA
ACCCGTTTCTTCATGCTACTGGGTTTATGCTTATTAGAGCAAAACAACCC
TGAACAATACTGAACTCCCAATCATGATAAACATTCTAGTCCCAGGTCAA
AAGGTCCAGTGGAGGAGGTGAAAGAAGAGTTAATTTTCCAATGAGGCTAA
AATTGTAAGGTACTTTCCAGTCGGGAGCTTGGCCAAATTTTCCAGTGGGT
TGGGGGTCCCACAAACCAGAATTTTGAATGCTCAAACTTGACTTAATTGA
TAAAGTTTCATGGGAATTAGTTTTTTTCTCATAATTCTTTAAGGCTACCT
TTTATCGTATGGTTCACTGGCATCTGTACATAATAGAAAATCATTTCCCT
TCGGAATAGATAACATGAACCAGTCCTTAATATCCTTGGCACCTTTTATG
ACAACCACACGTTGTTAGTTCGAATGCAGAAAAGGTTTAGAACGATCATT
TTTTTTCCTATATTATTTGAAAGATTTTAGTGAAATTAAAGACTGGCCAT
CTACATAGAGGACTATATATTTTTTGCTTGATTGTAAGCTATCAACACAT
CTCTTCGACCATAGCCACCAATTGCCATGCAGGCATTTTTTGTCCGTTTT
ACCATCCTAAAACCGTTCCAGTCTTTTTTCGCACCTATAGACAATAGAAA
AAGGTGTCAAAAAAGGATAGGATCGAGTTTAAGGGATAATTAAATAATAA
GGTGGCACGCGCCTGACCGTGCGATTACGGTCAAAAAGGTGTATTGTAAG
CGATTAAAATAGATTAAACCATCAAAATTACGTTCTTTATTTTTTCAGCT
CATTTGAATCTACGGCTACTTGAACAGCGTTGTGGTGAACTTATCAGGAG
CGGAGAGAGATGGATACTCAGACAACACGATGAATTTTAGTACAAAGAAC
GTCAATATTAGACATTTTATGGGAAATCGTATACCAGGCATTCAATAGTT
GTGCAGTTGTACAACAGATAAAAGCATATCTATGAATTTCGAAAGACGAC
TCGCCAAATAAAATGACTGAAAGAATTTTATATGCTACTTTTGAGGGAGT
GTGCTGAAATAGCGACATATTTTTTTTTAGATTGCCGCCAACACTAAATC
CTTTTAGTTACTGTATGTTTGACACCGAAATAACGTCATTATTATATTCA
AATACCGAAGCACCAACATAAAAAATGCTTATACCGTTACATCGTCAAAC
CTATATGCCCACTTATTACTTTTGACAGTAAAAAGAATTTAAAAGCAACA
GAATTTGAGTGTATTTGATATAACTATAGTTAATTCTTAATTTGATAGCA
CTAACCTGCACTACAATACCGAGTTTATGCATCGGAGGATATCGAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020437TCONS_00020437Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020437-proteinTCONS_00020437-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000356supercontigsc0000356:289994..299740 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.02	0.06	3.79	3.69	1.42	1.12	0.58	1.46	0.03	0.01	0.01	0	0.25	0.65	0.12	0	1.06	0.84	0.43	0.67	0.29	0.2	0.07	0	0	0