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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:285466..290191+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13243.1.p1 ID=MSTRG.13243.1.p1|Name=MSTRG.13243.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4726bp|location=Sequence derived from alignment at sc0000104_pilon:285466..290191+ (Clytia hemisphaerica_ch_hm2_pilon) TCAAAAATTGGACACGTATTGGGAAAGGATAAACATTCACAGTTCACGCA
GGAAGGATGAAAACCgttatctttttttcatttttcgttgCTGTCATCAG
CGCAGGTAAGCTTAAAAGTTCTTATTGCCTTATTCTGTTAGGTaatcccc
cggggggggggcactgaccttgacggccgacggggacgtaccgctggagt
ttgaaaagtggaccctgtcagatatgaatgtttggtaaatttgggaccct
gtcggaaaaaaatttattttcccattttcaccctgataagtggcaaaaat
gacgaaatataaacaaaaaattgaaaaagtttcttcagTTCCACCATGCA
GCAGTAAAATTAGATGGCTTGTTTGAAATTCACTGAcgtttgaattttgt
tttttcacgtAGCTCCCCGAAATTCCTTTtggaaaaagtataaaattatG
GTAATATTGAGGTgcattcaaatttatttttttaacaagaaacagctcaa
taaatcaaacTGTAAATAGTTCTTGAGATACCagtgccttttttgaaaag
tatgaACCATAATAAAGATGTACCTCTGATctatgcttttttataagaac
acgatgCTAAATTACGGCAATAACCTTAGACCAAATTAAGCCTATCCCGG
CGAAAACCCTAACTAACACTAAACCTagcattttaagaacatattaacct
gaaaaacacaaaataagaATTGGGTTCGGTTGAGACTCATCCAAGATTTA
CTAGTACTTATAAGAAATCGCGTATATGAGTCAGGCCAGTATGATTCCGT
TTTCGATATATGTCTAGAATTCAGCAAGGCAGAATTTTATTTCTCAGATA
ATCTCCCTCTGtatggaaaattatcctccaattgttatccccactgaaaa
ttttcaaataaaccaatccccaCTGCGAAATATTTTGCTACTTttcccac
tgcccccccccacagaattttctaacttgaaaacaaaagaattgaaatcc
ccagccataaaaagtatgggaatatcaatccccatcgagtttcatatttt
tatccacactggctgaaaaaatcctactgggtctgtgagaagggggtgtc
tctGTTAAATACATATGAGATACTGACCTAGGTGGTCTTTCGTTACAGAA
TGCGACGTCAGCAAATACAAGAAAATTGGTTGCTTTCAGATCGAGGATGA
AGTTCGACCAGATTCTTTCCATGAAGTCATCGATTTGGATGAAACTTTTG
ACATCGACAACTATGAGGAACAACTTCCAAAGTAAGACATTTATTAGGGT
AATATTTCTAATCCTCCTGGTAGTACAGCCGGAGATTTGATTTAAGAATA
CTTCTAACGAGCGTGATGCAAACTTGCCCAAAAGAAGGTGAGATATTGCA
CATTTTGAGTAAATATCTAGCTCCCTCAGGTGTTCTTGTAGCCCGGGGCC
ACttGCagctttttgatagactggatggcgctgataagtggcccagTGTA
ATTTTGCAGGCtccattttttggctttgcttgaggtggtagcaaatccaT
GCCACTAGACctacagccaattcgattgacctcaaaatatgccatttttg
ccctgattgccaattattttgcattcgattgacaaaaatttggcaaatgt
ggcaaaatttgagtgccataaatgtctccatacaaaacactgttcccacg
agacctgtgttcttttcgctccaattttgccaaagattttgaaaaataga
agaccttccaatgctaaaaCAAAACCATGCCGATCGGCAATTTGGTTGGT
TAAAAAATTCACCCGGGCGTATAAACACTTCGCGTTCTACAAACGCCAAA
AGAAAACTGCTGACGAAGCACCACAAAACAGAAATCAAAATGGCGGCGTA
GCGgtgtacaaatttgccatgaaactatgatcttttgacattgaaaatgT
GGATTTGGTaaagttggtgagtatggcaaattttgaagtcaatcaaattg
GCTGCTAGtccctttttgaagaaaaacaaacagaaaactatcgtagtttc
ataaactttgatgggattttagaaaacattttattgttttgatattttta
tataatttttgaaaacaaaagtgaaaaaattcaagatggagaAATTCTcc
agtctacttcactggactcagcgccatcaaaatcgtcagaaagcaaagtt
cagtcagaagtaagCTCTATAGTCTAGTGTTCCTGTAGACGAACTTTTTC
AGTAGCGTGTCGTCTTATTTGTTCGTTAGTATACCGTGTATAAGGCCTTC
TACACAGTGGCAGAACAGTTCTTAGAAAATTCTGGTCTAGACGAGGATCA
CTTTAATATCAATTCTCCATGTCTCCAGATTAGTATGCGAATGCTTCAGC
AAAACGAAAGATGATTACAAATACTTCTCAATCGGACATAACGGTCATTG
CCATGGTGGCAAATCTTTCCATGCATCAAACCGTACCAACAATGAAGCAG
GATGCATCGATGTTGGTCATCATAGTGCTGGAGATGAAGAACACGAATAT
GTTTACCAAATCAAAGCTGATGCAGCAACACGTACGTTTCTTTTTAAGAG
ATTTTTAAGAGTCAAATATTATTCGGAATTATCGAGCAAATTATAATGGT
TGCAAGTTTTCTTTTTGGGTGCTTTGTTACTTTCAGTAGGTCATGAAGCC
ACAAAAGATCTGGGaatatgtatattttttgaggaagaaaaatcagaaga
aaaaaaatttataaatgccATACATTCACTCTTGTGAATATAATGAGCTA
TCCTATTAATGTTTAAGGGAGTTTGGGTAATCTGATTTaagtaaaagtga
aaaaataagcttacactggcacttgggtACTTGTTTCCTTCCTTATGAAT
TTTCATCTAAATTTCAGCAATTGATGGTGGAGTCAGTGATTTTGGTCCAT
GGTCACAATGTTCCAAATCATGTGGTGGTGGTAGAAGATCACGTGAGCGC
GCATGCGTAGATCCCATCCCAAACGACCCTGGAAAAGGTTGTGAAAATTT
GACTCAAGTCGAAGAATGCAACACTCAAAACTGCCCAAGTAAGTAAAATG
AAGTCTTTTCAAGGTAATATGATAGACTTGATAAGAATATCAAAAGATTC
AGAAATTTTAGCTGACCCGGTTGCAAGACTCTCAGAAGGTTTGTTAGTAA
CTAAATAGTATCATTGTTTTATTCTCTGCTGACGTCAATCTCCTAAGTTT
TATTCCTGAAAAAACCATCCCAGTTCAACAGAATGCCCTAAAATATCATT
AAACTGAGACTTATGCTATACTAAACACAGGaaaaaaaCTCCATAATTTT
CAGTGATCTTTATAATTTGAAatcctaaaataaaaacagagaTACTCCGT
CCCTCACCGTATTATTTTAGTCGCTTTACAGCCGTGTAAGAGCCTCTAGA
GAAACTCAACGACCTACTGAGACAATGGTTCATTAAAATTACgtaataat
agaccttttcataatttGCGTCACGAACAtaacttgcctcgttttgaaat
tattgccaaggtgattaactcccagcggattttattagaACTTCTTtcga
tttataaaaaaatcatttaatgtctcaagggacaaaATCACcatgattta
tgaaaaggtctattcttaaTCTTAATTTTAATCCATCCTTTTATAGTTAA
CGGAGCCTGGGGAGGGTGGTCGGAATTCAGCCAATGTAGCAAGTCTTGTG
GAATGGGTTCACAATCACGAAGCCGTAAATGCAATAGTCCAAAAGAACAA
TTTGGTGGGAAGAAATGCGTTGGCAAACACACAGAAACCCAAAGTTGCAT
GCCACAAATGTGTACGTATCTTTTGGATTATTTAACAATTATCGTTCGGC
AAACCCGAACCGAGTCCCCTAGTCCGCTTTTTTACGATTCTTATATTACT
CAAGAAAGATTTTATTGCATCCAATATAGACTGGaatcgtttataatgcg
tgtaattcAGTAGTATAGGCGCTATATGATAATAATtctattgttacggg
atttagttcgaataaactaaaattgttccctccattactttttgctttat
ttctactatgtctgaattagtcgtctagcttgcagAACTACATCCAATAG
AAATATTTAAAGATGGTGCAAGTGATACTGGGGATTAAAATCCCtgtaaa
acttaaattatagtTTCTAACACCTTGCCTGAGTTTTTGACACAGAATCC
ATTGTAtggtaaaatttcttttctttgaaaaggtgtCAAGGGTAAATCTG
ATGTTCGAATCTGTGAAGATAAAGCAGAAACTCTTTCTTGCCCTGCTAAC
TGGTCAGTACAAATCCAATCTGGTTCCTACTATGGTCGCAAAAACACATC
TGTATGCAAACGATTCTACAACATCAATTGGTCAACTACATGCGAAGCTA
ACGGTGGCAAAGACAAGATGGCTGAATTATGTGATGGCAAAAGGTCGTGT
AGTATCGATTGCAACAATGATCGATTTGGTGATCCTTGTTGGGGAACTAA
GAAGTATTGTTTAGTCAAATACAAATGTGTTGGTTATgatttgtaaaaaa
tcattattttgacATACTGTTTTACTATTTGTATGAACTTTTATTTATGA
GAAGAAAATTTGAGATTGAATCtaactttcaaaatattattacacccctg
tctctgtgccccaGTGGGTGTTGATT Coding sequence (CDS) from alignment at sc0000104_pilon:285466..290191+ >MSTRG.13243.1.p1 ID=MSTRG.13243.1.p1|Name=MSTRG.13243.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6210bp|location=Sequence derived from alignment at sc0000104_pilon:285466..290191+ (Clytia hemisphaerica_ch_hm2_pilon) ATGAAAACCgttatctttttttcatttttcgttgCTGTCATCAGCGCAGA ATGCGACGTCAGCAAATACAAGAAAATTGGTTGCTTTCAGATCGAGGATG AAGTTCGACCAGATTCTTTCCATGAAGTCATCGATTTGGATGAAACTTTT GACATCGACAACTATGAGGAACAACTTCCAAAATTAGTATGCGAATGCTT CAGCAAAACGAAAGATGATTACAAATACTTCTCAATCGGACATAACGGTC ATTGCCATGGTGGCAAATCTTTCCATGCATCAAACCGTACCAACAATGAA GCAGGATGCATCGATGTTGGTCATCATAGTGCTGGAGATGAAGAACACGA ATATGTTTACCAAATCAAAGCTGATGCAGCAACACCAATTGATGGTGGAG TCAGTGATTTTGGTCCATGGTCACAATGTTCCAAATCATGTGGTGGTGGT AGAAGATCACGTGAGCGCGCATGCGTAGATCCCATCCCAAACGACCCTGG AAAAGGTTGTGAAAATTTGACTCAAGTCGAAGAATGCAACACTCAAAACT GCCCAATTAACGGAGCCTGGGGAGGGTGGTCGGAATTCAGCCAATGTAGC AAGTCTTGTGGAATGGGTTCACAATCACGAAGCCGTAAATGCAATAGTCC AAAAGAACAATTTGGTGGGAAGAAATGCGTTGGCAAACACACAGAAACCC AAAGTTGCATGCCACAAATGTgtgtCAAGGGTAAATCTGATGTTCGAATC TGTGAAGATAAAGCAGAAACTCTTTCTTGCCCTGCTAACTGGTCAGTACA AATCCAATCTGGTTCCTACTATGGTCGCAAAAACACATCTGTATGCAAAC GATTCTACAACATCAATTGGTCAACTACATGCGAAGCTAACGGTGGCAAA GACAAGATGGCTGAATTATGTGATGGCAAAAGGTCGTGTAGTATCGATTG CAACAATGATCGATTTGGTGATCCTTGTTGGGGAACTAAGAAGTATTGTT TAGTCAAATACAAATGTGTTGGTTATgatttgtaaATGAAAACCgttatc tttttttcatttttcgttgCTGTCATCAGCGCAGAATGCGACGTCAGCAA ATACAAGAAAATTGGTTGCTTTCAGATCGAGGATGAAGTTCGACCAGATT CTTTCCATGAAGTCATCGATTTGGATGAAACTTTTGACATCGACAACTAT GAGGAACAACTTCCAAAATTAGTATGCGAATGCTTCAGCAAAACGAAAGA TGATTACAAATACTTCTCAATCGGACATAACGGTCATTGCCATGGTGGCA AATCTTTCCATGCATCAAACCGTACCAACAATGAAGCAGGATGCATCGAT GTTGGTCATCATAGTGCTGGAGATGAAGAACACGAATATGTTTACCAAAT CAAAGCTGATGCAGCAACACCAATTGATGGTGGAGTCAGTGATTTTGGTC CATGGTCACAATGTTCCAAATCATGTGGTGGTGGTAGAAGATCACGTGAG CGCGCATGCGTAGATCCCATCCCAAACGACCCTGGAAAAGGTTGTGAAAA TTTGACTCAAGTCGAAGAATGCAACACTCAAAACTGCCCAATTAACGGAG CCTGGGGAGGGTGGTCGGAATTCAGCCAATGTAGCAAGTCTTGTGGAATG GGTTCACAATCACGAAGCCGTAAATGCAATAGTCCAAAAGAACAATTTGG TGGGAAGAAATGCGTTGGCAAACACACAGAAACCCAAAGTTGCATGCCAC AAATGTgtgtCAAGGGTAAATCTGATGTTCGAATCTGTGAAGATAAAGCA GAAACTCTTTCTTGCCCTGCTAACTGGTCAGTACAAATCCAATCTGGTTC CTACTATGGTCGCAAAAACACATCTGTATGCAAACGATTCTACAACATCA ATTGGTCAACTACATGCGAAGCTAACGGTGGCAAAGACAAGATGGCTGAA TTATGTGATGGCAAAAGGTCGTGTAGTATCGATTGCAACAATGATCGATT TGGTGATCCTTGTTGGGGAACTAAGAAGTATTGTTTAGTCAAATACAAAT GTGTTGGTTATgatttgtaaATGAAAACCgttatctttttttcatttttc gttgCTGTCATCAGCGCAGAATGCGACGTCAGCAAATACAAGAAAATTGG TTGCTTTCAGATCGAGGATGAAGTTCGACCAGATTCTTTCCATGAAGTCA TCGATTTGGATGAAACTTTTGACATCGACAACTATGAGGAACAACTTCCA AAATTAGTATGCGAATGCTTCAGCAAAACGAAAGATGATTACAAATACTT CTCAATCGGACATAACGGTCATTGCCATGGTGGCAAATCTTTCCATGCAT CAAACCGTACCAACAATGAAGCAGGATGCATCGATGTTGGTCATCATAGT GCTGGAGATGAAGAACACGAATATGTTTACCAAATCAAAGCTGATGCAGC AACACCAATTGATGGTGGAGTCAGTGATTTTGGTCCATGGTCACAATGTT CCAAATCATGTGGTGGTGGTAGAAGATCACGTGAGCGCGCATGCGTAGAT CCCATCCCAAACGACCCTGGAAAAGGTTGTGAAAATTTGACTCAAGTCGA AGAATGCAACACTCAAAACTGCCCAATTAACGGAGCCTGGGGAGGGTGGT CGGAATTCAGCCAATGTAGCAAGTCTTGTGGAATGGGTTCACAATCACGA AGCCGTAAATGCAATAGTCCAAAAGAACAATTTGGTGGGAAGAAATGCGT TGGCAAACACACAGAAACCCAAAGTTGCATGCCACAAATGTgtgtCAAGG GTAAATCTGATGTTCGAATCTGTGAAGATAAAGCAGAAACTCTTTCTTGC CCTGCTAACTGGTCAGTACAAATCCAATCTGGTTCCTACTATGGTCGCAA AAACACATCTGTATGCAAACGATTCTACAACATCAATTGGTCAACTACAT GCGAAGCTAACGGTGGCAAAGACAAGATGGCTGAATTATGTGATGGCAAA AGGTCGTGTAGTATCGATTGCAACAATGATCGATTTGGTGATCCTTGTTG GGGAACTAAGAAGTATTGTTTAGTCAAATACAAATGTGTTGGTTATgatt tgtaaATGAAAACCgttatctttttttcatttttcgttgCTGTCATCAGC GCAGAATGCGACGTCAGCAAATACAAGAAAATTGGTTGCTTTCAGATCGA GGATGAAGTTCGACCAGATTCTTTCCATGAAGTCATCGATTTGGATGAAA CTTTTGACATCGACAACTATGAGGAACAACTTCCAAAATTAGTATGCGAA TGCTTCAGCAAAACGAAAGATGATTACAAATACTTCTCAATCGGACATAA CGGTCATTGCCATGGTGGCAAATCTTTCCATGCATCAAACCGTACCAACA ATGAAGCAGGATGCATCGATGTTGGTCATCATAGTGCTGGAGATGAAGAA CACGAATATGTTTACCAAATCAAAGCTGATGCAGCAACACCAATTGATGG TGGAGTCAGTGATTTTGGTCCATGGTCACAATGTTCCAAATCATGTGGTG GTGGTAGAAGATCACGTGAGCGCGCATGCGTAGATCCCATCCCAAACGAC CCTGGAAAAGGTTGTGAAAATTTGACTCAAGTCGAAGAATGCAACACTCA AAACTGCCCAATTAACGGAGCCTGGGGAGGGTGGTCGGAATTCAGCCAAT GTAGCAAGTCTTGTGGAATGGGTTCACAATCACGAAGCCGTAAATGCAAT AGTCCAAAAGAACAATTTGGTGGGAAGAAATGCGTTGGCAAACACACAGA AACCCAAAGTTGCATGCCACAAATGTgtgtCAAGGGTAAATCTGATGTTC GAATCTGTGAAGATAAAGCAGAAACTCTTTCTTGCCCTGCTAACTGGTCA GTACAAATCCAATCTGGTTCCTACTATGGTCGCAAAAACACATCTGTATG CAAACGATTCTACAACATCAATTGGTCAACTACATGCGAAGCTAACGGTG GCAAAGACAAGATGGCTGAATTATGTGATGGCAAAAGGTCGTGTAGTATC GATTGCAACAATGATCGATTTGGTGATCCTTGTTGGGGAACTAAGAAGTA TTGTTTAGTCAAATACAAATGTGTTGGTTATgatttgtaaATGAAAACCg ttatctttttttcatttttcgttgCTGTCATCAGCGCAGAATGCGACGTC AGCAAATACAAGAAAATTGGTTGCTTTCAGATCGAGGATGAAGTTCGACC AGATTCTTTCCATGAAGTCATCGATTTGGATGAAACTTTTGACATCGACA ACTATGAGGAACAACTTCCAAAATTAGTATGCGAATGCTTCAGCAAAACG AAAGATGATTACAAATACTTCTCAATCGGACATAACGGTCATTGCCATGG TGGCAAATCTTTCCATGCATCAAACCGTACCAACAATGAAGCAGGATGCA TCGATGTTGGTCATCATAGTGCTGGAGATGAAGAACACGAATATGTTTAC CAAATCAAAGCTGATGCAGCAACACCAATTGATGGTGGAGTCAGTGATTT TGGTCCATGGTCACAATGTTCCAAATCATGTGGTGGTGGTAGAAGATCAC GTGAGCGCGCATGCGTAGATCCCATCCCAAACGACCCTGGAAAAGGTTGT GAAAATTTGACTCAAGTCGAAGAATGCAACACTCAAAACTGCCCAATTAA CGGAGCCTGGGGAGGGTGGTCGGAATTCAGCCAATGTAGCAAGTCTTGTG GAATGGGTTCACAATCACGAAGCCGTAAATGCAATAGTCCAAAAGAACAA TTTGGTGGGAAGAAATGCGTTGGCAAACACACAGAAACCCAAAGTTGCAT GCCACAAATGTgtgtCAAGGGTAAATCTGATGTTCGAATCTGTGAAGATA AAGCAGAAACTCTTTCTTGCCCTGCTAACTGGTCAGTACAAATCCAATCT GGTTCCTACTATGGTCGCAAAAACACATCTGTATGCAAACGATTCTACAA CATCAATTGGTCAACTACATGCGAAGCTAACGGTGGCAAAGACAAGATGG CTGAATTATGTGATGGCAAAAGGTCGTGTAGTATCGATTGCAACAATGAT CGATTTGGTGATCCTTGTTGGGGAACTAAGAAGTATTGTTTAGTCAAATA CAAATGTGTTGGTTATgatttgtaaATGAAAACCgttatctttttttcat ttttcgttgCTGTCATCAGCGCAGAATGCGACGTCAGCAAATACAAGAAA ATTGGTTGCTTTCAGATCGAGGATGAAGTTCGACCAGATTCTTTCCATGA AGTCATCGATTTGGATGAAACTTTTGACATCGACAACTATGAGGAACAAC TTCCAAAATTAGTATGCGAATGCTTCAGCAAAACGAAAGATGATTACAAA TACTTCTCAATCGGACATAACGGTCATTGCCATGGTGGCAAATCTTTCCA TGCATCAAACCGTACCAACAATGAAGCAGGATGCATCGATGTTGGTCATC ATAGTGCTGGAGATGAAGAACACGAATATGTTTACCAAATCAAAGCTGAT GCAGCAACACCAATTGATGGTGGAGTCAGTGATTTTGGTCCATGGTCACA ATGTTCCAAATCATGTGGTGGTGGTAGAAGATCACGTGAGCGCGCATGCG TAGATCCCATCCCAAACGACCCTGGAAAAGGTTGTGAAAATTTGACTCAA GTCGAAGAATGCAACACTCAAAACTGCCCAATTAACGGAGCCTGGGGAGG GTGGTCGGAATTCAGCCAATGTAGCAAGTCTTGTGGAATGGGTTCACAAT CACGAAGCCGTAAATGCAATAGTCCAAAAGAACAATTTGGTGGGAAGAAA TGCGTTGGCAAACACACAGAAACCCAAAGTTGCATGCCACAAATGTgtgt CAAGGGTAAATCTGATGTTCGAATCTGTGAAGATAAAGCAGAAACTCTTT CTTGCCCTGCTAACTGGTCAGTACAAATCCAATCTGGTTCCTACTATGGT CGCAAAAACACATCTGTATGCAAACGATTCTACAACATCAATTGGTCAAC TACATGCGAAGCTAACGGTGGCAAAGACAAGATGGCTGAATTATGTGATG GCAAAAGGTCGTGTAGTATCGATTGCAACAATGATCGATTTGGTGATCCT TGTTGGGGAACTAAGAAGTATTGTTTAGTCAAATACAAATGTGTTGGTTA Tgatttgtaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000104_pilon | genome | sc0000104_pilon:285466..290191 + |
|