XLOC_009639 (gene) - C. hemisphaerica

Overview
NameXLOC_009639
Unique NameXLOC_009639
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000261:142408..146811+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009639 ID=XLOC_009639|Name=XLOC_009639|organism=Clytia hemisphaerica|type=gene|length=4404bp|location=Sequence derived from alignment at sc0000261:142408..146811+ (Clytia hemisphaerica)
tgtcctgttgaataattatgtagtccagccataaaaacaatgatagagcc
atgcataattactgtatcatgcatattgtaataattatgcatggttttat
cattgttttttctgctggactacataattattcaacagggtggcctcttt
gaaaaaaggtctataaatgTTATTGAGGGACATGGAAAAATGCACATGCA
CACTGCTTGACCCAAAAAGAAGCAAGCAAAAGTCCAGCATTCATTTTCAA
TTGAATACATTCTGGGTTTCAATTTTATTAGTTACTGTACTTGTTGATCA
AGCTTTTTCTTGGAGGACTGACGATCTATATAGAGATAAAAGAGGAAGGC
AACAAGACTTTAATGATTATGAGACATCAAATGAATATGACTCTTCAAAT
GATAGACAGCCATCTGCTGCATCTCGCCATCATCATCGCTCAAGGATTTC
TAGCAGTTTTCGTAGAGATTACAGGACTTGTGTACAAGGTGGCGAATATC
TAAGAGGATTTACGCTTGAAGGAGGCACAAAAGCAGGAAATTTTACTAGG
TTAGGGGATGCAGATACGCTGAATGAATGTGCTTCTTTGTGCTGTATGCG
GAAATCTTGTCAACAAGCGCTACTTTTGACTCAACCAGATACTGGATACA
AGACATGTTTTCAAGTTGTTTGTACAAAATCAAGTTCTTGTAAAGCAATC
AGTGATAGAGATTCAAATTATAACCCACAACTTTTTAGAAAAGGTTCAGC
AAGCAGTAACAAAAAAGGTATAACATTGAGCTATTCCCAAAATAATAAAT
TCTTTGTTGATACTCCTGTATAAATATAATCTATTTATTTTGTATGTCCT
TAGGGAAATACCAATCAATTCAAAATCCTCCCTTTCCACctagaaataaa
tatttttaaacaagaaaaaatctaacaaaataGGAAAATAGTCAAATTTC
AATTCCGGGATGAAATCTCTTGGGTTgtaaaattttttaactttattgtT
TATATATTTATCAGTGGCTACCTCAGAGGTTGATTCACACAGCATCATAT
CAAATGAGTAAGTCACTTCTATCTGCAGTCTCTGAATACGCAAGAAAAGA
GCTTCTATTAAATAATATATACTTTTAAGTTTAGCTCTTTAGAAGGTGAG
GCACAGTGTGTACAATTCCATCCTcagattttaattttcacttaaaatct
ataccgggtgcgccagaAAAAGGTATACAAGTTTTTCGAGATATTGTAGG
CTTTAGGAtgagaatttttatttgattctttttcCATTGTATAGGGGAAA
ATCTAACTTAAACTTTGGtatataaaactttaaaataggtttagtcaatc
aaaagttatgctaaaaaaactgaaaatttcgacttaaccaaaaattcaaa
attcattagaaacaaggaacaaaattttctctttgtttATTGTCACTTAA
ACAGTTAAATAGCCATAAATGAATAAAATTGTCAATTGGTAACTGTAAAA
TGGTTGATTTAAGGTCGCTAGAGCTCAAACTTTGCTAAGAAAGTAAAAAT
CTCcataaaaattcaaagattCCTGCTAAAtagctaaaaactaaaaaaaa
catccaatttTCAAGTGAAACTTTCAAAATGCCACCATATCGATACTTCG
ACGCCCTGATTTTAGTTTTGAGGcttaatttgaattattttaataTCCAA
TGAGTTGAGGAAAGCTTAAAGACCaacattttaccaaaaaaaatgcTTAG
AAAATTTTATCGAAATACCCTTGATAATATTGGTAATTGTACATGTACAT
TGTACattgtacaccttttttcccattttttgtcaaaaaaaattttttca
gttaaagttgaagaaaagttactggatttcattttggcaaaatcgcgatc
ttaaaatctttttttgatccagagttataaccatttaaatttcaaaacaa
agttcgtcttatgatggattatttactcaaataattgNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtaggatttaaagagttaaagtcaattccaaaaaaaatcccaagaca
cttttttagttcaatctattgggaacatagtatcaaaattattttttcaa
aattcaaaagctatgggtgactttaacttctttgaagtaggtaaggttaa
aattcttaagattttaattatgtcctacccagttttttaaattcagctga
aacttttaccattagaaagagaatattattggctttcagaaaatatatac
ttttgatatataaaaatttgttgttctaaagatatgattatgatcaatta
aagagaatgtgtcaagaaaggtgaacacatacctcaatgaattttgaatt
tttgggtaAGTCaagattttcagttttttgtatcataacttttgattgac
tgAACCGATTTTGAAGTTTTATATACCAAAGTTTAAGTTAGATTTTCCCC
TatacaatgaaaaaagaatcaaataaaaattctcaTCCTAAAGCctacaa
tatctcgacaaacttGTATACTTTTTTCTGGCGCACCCagtattgtaatt
ttttgaaaaactggaATTTAATAAGAACATAATTTTTCTTAATAAAAATA
TGATAATAAAACTTTTAACCCCTAAAGTAAAAGTTTTAAGACAATGTACA
CTTGCCTTTATGTTGCTCTGAATAATCATATTATAATGACTTTGAAAGCT
TTATTTTAAACATTTCAGCACAGCACTAGATAAAGATTTACCAGCACTTG
TGAGAGTTAAACGGTATTTAACCCTTATTATAATGATTAAATTTGCAGTT
CTAGTGTAactttaatatcttaaaaataaGACATAATATTTTAGCAATCA
AAGTAAAAACTGTAACTGTAACAACCAATTGTTTACTAAGtttaatttta
ttcaactttAAGAAACAAATAGGTActttaattgattttaaacacataaa
ttgcaacttttttgatttccaatttATAACATCGCTTGTATAGAGCACTG
AAGAGgatttttaatcgaaaagcttttgctcaattttaaaataaaacttt
gttgttttttctttaaattaacttttggaatggcaaaatttcaaaaaaac
aaatagaTATGTTTTCATTCAATTGCTGCAGATTACTATTATAATTTTAT
TTCAGAGGGAAAGGATTTTGTCGACAGATTTCTGGTCATGCATGTGCGAA
TTATGTTGATCCCAATGCAATGTATTATTTCACAAGTAACAAGAATAACA
CAGACTTGGACAAAAGATTACAAAAACCCATTAAACTGATTAGCAGCCGT
TTGACTGGAAAATGCAAAACCATTGCTCTTCAAGCTATATGTTACCGCTT
CTATCCACAATGCTCTAAACTTTCAAGCACACCAAAATCAATAAATGTTT
GTGAAGATGAATGCACTGAAATTCTTGCAGGAGATTGTTCTGATGCGTTT
GAAATTGCGCACTTGTccaaatatttacaaaaagtgaTTCCAAAATGTGC
GGAAAGTAATACATATTCTGGAGAAGACGATGATGAAGATCAAGAGAATG
GCAATTCTGACGCTCAATGTACTCATCTGCAAGAaggtatttatttttgt
tttcatagcATAGCCATAGCATTTTTCGGGGGGACAAAGaatctttaaaa
gaatttccagggttgtgatatttttaagaaaagtcTAAATAATACgaaat
aagacttttttagTCTGTTCAATACTGTGTTTATACTATTTTATTCTTAC
CAATGATTTTGAAttattctttttcttcaaaagcaAGATTACTGGATTTT
ATCTATGTCCTTACTTCTGTTACTGAAATCTCTACAAtataagaaaagtt
tgaaattgaTTAATAGATATAACTTCAATATTTATCTACAGTTCTTCCAA
AAGCAATCAATCACCCTATTCGGGCTGTTCCTACAACGTCATCATCAACA
ACCATACCTTTCAAAACCAACCCAACCAACTCAGTCAAGCATACCACACT
CAAACCATCTCAATCACAATCTTTTACTGGGCGATCCCAGAATGCAACAA
AACAACACATTTATAATCCAACTAGAGGATTTACTTCAAGAAAACCGATC
ACAACACCAACAGTTGACAATAATGATGTCGATGATCGCTCAGACAATCG
AAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017223TCONS_00017223Clytia hemisphaericatranscript
TCONS_00017224TCONS_00017224Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017223-proteinTCONS_00017223-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000261supercontigsc0000261:142408..146811 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.76	3.9	1.83	0.97	17.7	13.36	13.98	15.19	10.05	12.84	11.75	10.95	9.09	7.15	7.51	10.25	7.36	8.68	5.59	9	6.88	6.97	4.65	7.46	9.88	10.22	6.14	3.9	6.71	7.11