TCONS_00017223 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00017223
Unique Name	TCONS_00017223
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1549

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000261:142408..146811+
coding sequence from alignment at sc0000261:142408..146811+

transcript sequence

>TCONS_00017223 ID=TCONS_00017223|Name=TCONS_00017223|organism=Clytia hemisphaerica|type=transcript|length=1549bp
tgtcctgttgaataattatgtagtccagccataaaaacaatgatagagcc
atgcataattactgtatcatgcatattgtaataattatgcatggttttat
cattgttttttctgctggactacataattattcaacagggtggcctcttt
gaaaaaaggtctataaatgTTATTGAGGGACATGGAAAAATGCACATGCA
CACTGCTTGACCCAAAAAGAAGCAAGCAAAAGTCCAGCATTCATTTTCAA
TTGAATACATTCTGGGTTTCAATTTTATTAGTTACTGTACTTGTTGATCA
AGCTTTTTCTTGGAGGACTGACGATCTATATAGAGATAAAAGAGGAAGGC
AACAAGACTTTAATGATTATGAGACATCAAATGAATATGACTCTTCAAAT
GATAGACAGCCATCTGCTGCATCTCGCCATCATCATCGCTCAAGGATTTC
TAGCAGTTTTCGTAGAGATTACAGGACTTGTGTACAAGGTGGCGAATATC
TAAGAGGATTTACGCTTGAAGGAGGCACAAAAGCAGGAAATTTTACTAGG
TTAGGGGATGCAGATACGCTGAATGAATGTGCTTCTTTGTGCTGTATGCG
GAAATCTTGTCAACAAGCGCTACTTTTGACTCAACCAGATACTGGATACA
AGACATGTTTTCAAGTTGTTTGTACAAAATCAAGTTCTTGTAAAGCAATC
AGTGATAGAGATTCAAATTATAACCCACAACTTTTTAGAAAAGGTTCAGC
AAGCAGTAACAAAAAAGTGGCTACCTCAGAGGTTGATTCACACAGCATCA
TATCAAATGACACAGCACTAGATAAAGATTTACCAGCACTTGTGAGAGTT
AAACGAGGGAAAGGATTTTGTCGACAGATTTCTGGTCATGCATGTGCGAA
TTATGTTGATCCCAATGCAATGTATTATTTCACAAGTAACAAGAATAACA
CAGACTTGGACAAAAGATTACAAAAACCCATTAAACTGATTAGCAGCCGT
TTGACTGGAAAATGCAAAACCATTGCTCTTCAAGCTATATGTTACCGCTT
CTATCCACAATGCTCTAAACTTTCAAGCACACCAAAATCAATAAATGTTT
GTGAAGATGAATGCACTGAAATTCTTGCAGGAGATTGTTCTGATGCGTTT
GAAATTGCGCACTTGTccaaatatttacaaaaagtgaTTCCAAAATGTGC
GGAAAGTAATACATATTCTGGAGAAGACGATGATGAAGATCAAGAGAATG
GCAATTCTGACGCTCAATGTACTCATCTGCAAGAagTTCTTCCAAAAGCA
ATCAATCACCCTATTCGGGCTGTTCCTACAACGTCATCATCAACAACCAT
ACCTTTCAAAACCAACCCAACCAACTCAGTCAAGCATACCACACTCAAAC
CATCTCAATCACAATCTTTTACTGGGCGATCCCAGAATGCAACAAAACAA
CACATTTATAATCCAACTAGAGGATTTACTTCAAGAAAACCGATCACAAC
ACCAACAGTTGACAATAATGATGTCGATGATCGCTCAGACAATCGAAAT

Run BLAST on NCBI

protein sequence of TCONS_00017223-protein

>TCONS_00017223-protein ID=TCONS_00017223-protein|Name=TCONS_00017223-protein|organism=Clytia hemisphaerica|type=polypeptide|length=461bp
MLLRDMEKCTCTLLDPKRSKQKSSIHFQLNTFWVSILLVTVLVDQAFSWR
TDDLYRDKRGRQQDFNDYETSNEYDSSNDRQPSAASRHHHRSRISSSFRR
DYRTCVQGGEYLRGFTLEGGTKAGNFTRLGDADTLNECASLCCMRKSCQQ
ALLLTQPDTGYKTCFQVVCTKSSSCKAISDRDSNYNPQLFRKGSASSNKK
VATSEVDSHSIISNDTALDKDLPALVRVKRGKGFCRQISGHACANYVDPN
AMYYFTSNKNNTDLDKRLQKPIKLISSRLTGKCKTIALQAICYRFYPQCS
KLSSTPKSINVCEDECTEILAGDCSDAFEIAHLSKYLQKVIPKCAESNTY
SGEDDDEDQENGNSDAQCTHLQEVLPKAINHPIRAVPTTSSSTTIPFKTN
PTNSVKHTTLKPSQSQSFTGRSQNATKQHIYNPTRGFTSRKPITTPTVDN
NDVDDRSDNRN

Run BLAST on NCBI

transcript from alignment at sc0000261:142408..146811+

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00017223 ID=TCONS_00017223|Name=TCONS_00017223|organism=Clytia hemisphaerica|type=transcript|length=4404bp|location=Sequence derived from alignment at sc0000261:142408..146811+ (Clytia hemisphaerica)
tgtcctgttgaataattatgtagtccagccataaaaacaatgatagagcc
atgcataattactgtatcatgcatattgtaataattatgcatggttttat
cattgttttttctgctggactacataattattcaacagggtggcctcttt
gaaaaaaggtctataaatgTTATTGAGGGACATGGAAAAATGCACATGCA
CACTGCTTGACCCAAAAAGAAGCAAGCAAAAGTCCAGCATTCATTTTCAA
TTGAATACATTCTGGGTTTCAATTTTATTAGTTACTGTACTTGTTGATCA
AGCTTTTTCTTGGAGGACTGACGATCTATATAGAGATAAAAGAGGAAGGC
AACAAGACTTTAATGATTATGAGACATCAAATGAATATGACTCTTCAAAT
GATAGACAGCCATCTGCTGCATCTCGCCATCATCATCGCTCAAGGATTTC
TAGCAGTTTTCGTAGAGATTACAGGACTTGTGTACAAGGTGGCGAATATC
TAAGAGGATTTACGCTTGAAGGAGGCACAAAAGCAGGAAATTTTACTAGG
TTAGGGGATGCAGATACGCTGAATGAATGTGCTTCTTTGTGCTGTATGCG
GAAATCTTGTCAACAAGCGCTACTTTTGACTCAACCAGATACTGGATACA
AGACATGTTTTCAAGTTGTTTGTACAAAATCAAGTTCTTGTAAAGCAATC
AGTGATAGAGATTCAAATTATAACCCACAACTTTTTAGAAAAGGTTCAGC
AAGCAGTAACAAAAAAGGTATAACATTGAGCTATTCCCAAAATAATAAAT
TCTTTGTTGATACTCCTGTATAAATATAATCTATTTATTTTGTATGTCCT
TAGGGAAATACCAATCAATTCAAAATCCTCCCTTTCCACctagaaataaa
tatttttaaacaagaaaaaatctaacaaaataGGAAAATAGTCAAATTTC
AATTCCGGGATGAAATCTCTTGGGTTgtaaaattttttaactttattgtT
TATATATTTATCAGTGGCTACCTCAGAGGTTGATTCACACAGCATCATAT
CAAATGAGTAAGTCACTTCTATCTGCAGTCTCTGAATACGCAAGAAAAGA
GCTTCTATTAAATAATATATACTTTTAAGTTTAGCTCTTTAGAAGGTGAG
GCACAGTGTGTACAATTCCATCCTcagattttaattttcacttaaaatct
ataccgggtgcgccagaAAAAGGTATACAAGTTTTTCGAGATATTGTAGG
CTTTAGGAtgagaatttttatttgattctttttcCATTGTATAGGGGAAA
ATCTAACTTAAACTTTGGtatataaaactttaaaataggtttagtcaatc
aaaagttatgctaaaaaaactgaaaatttcgacttaaccaaaaattcaaa
attcattagaaacaaggaacaaaattttctctttgtttATTGTCACTTAA
ACAGTTAAATAGCCATAAATGAATAAAATTGTCAATTGGTAACTGTAAAA
TGGTTGATTTAAGGTCGCTAGAGCTCAAACTTTGCTAAGAAAGTAAAAAT
CTCcataaaaattcaaagattCCTGCTAAAtagctaaaaactaaaaaaaa
catccaatttTCAAGTGAAACTTTCAAAATGCCACCATATCGATACTTCG
ACGCCCTGATTTTAGTTTTGAGGcttaatttgaattattttaataTCCAA
TGAGTTGAGGAAAGCTTAAAGACCaacattttaccaaaaaaaatgcTTAG
AAAATTTTATCGAAATACCCTTGATAATATTGGTAATTGTACATGTACAT
TGTACattgtacaccttttttcccattttttgtcaaaaaaaattttttca
gttaaagttgaagaaaagttactggatttcattttggcaaaatcgcgatc
ttaaaatctttttttgatccagagttataaccatttaaatttcaaaacaa
agttcgtcttatgatggattatttactcaaataattgNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtaggatttaaagagttaaagtcaattccaaaaaaaatcccaagaca
cttttttagttcaatctattgggaacatagtatcaaaattattttttcaa
aattcaaaagctatgggtgactttaacttctttgaagtaggtaaggttaa
aattcttaagattttaattatgtcctacccagttttttaaattcagctga
aacttttaccattagaaagagaatattattggctttcagaaaatatatac
ttttgatatataaaaatttgttgttctaaagatatgattatgatcaatta
aagagaatgtgtcaagaaaggtgaacacatacctcaatgaattttgaatt
tttgggtaAGTCaagattttcagttttttgtatcataacttttgattgac
tgAACCGATTTTGAAGTTTTATATACCAAAGTTTAAGTTAGATTTTCCCC
TatacaatgaaaaaagaatcaaataaaaattctcaTCCTAAAGCctacaa
tatctcgacaaacttGTATACTTTTTTCTGGCGCACCCagtattgtaatt
ttttgaaaaactggaATTTAATAAGAACATAATTTTTCTTAATAAAAATA
TGATAATAAAACTTTTAACCCCTAAAGTAAAAGTTTTAAGACAATGTACA
CTTGCCTTTATGTTGCTCTGAATAATCATATTATAATGACTTTGAAAGCT
TTATTTTAAACATTTCAGCACAGCACTAGATAAAGATTTACCAGCACTTG
TGAGAGTTAAACGGTATTTAACCCTTATTATAATGATTAAATTTGCAGTT
CTAGTGTAactttaatatcttaaaaataaGACATAATATTTTAGCAATCA
AAGTAAAAACTGTAACTGTAACAACCAATTGTTTACTAAGtttaatttta
ttcaactttAAGAAACAAATAGGTActttaattgattttaaacacataaa
ttgcaacttttttgatttccaatttATAACATCGCTTGTATAGAGCACTG
AAGAGgatttttaatcgaaaagcttttgctcaattttaaaataaaacttt
gttgttttttctttaaattaacttttggaatggcaaaatttcaaaaaaac
aaatagaTATGTTTTCATTCAATTGCTGCAGATTACTATTATAATTTTAT
TTCAGAGGGAAAGGATTTTGTCGACAGATTTCTGGTCATGCATGTGCGAA
TTATGTTGATCCCAATGCAATGTATTATTTCACAAGTAACAAGAATAACA
CAGACTTGGACAAAAGATTACAAAAACCCATTAAACTGATTAGCAGCCGT
TTGACTGGAAAATGCAAAACCATTGCTCTTCAAGCTATATGTTACCGCTT
CTATCCACAATGCTCTAAACTTTCAAGCACACCAAAATCAATAAATGTTT
GTGAAGATGAATGCACTGAAATTCTTGCAGGAGATTGTTCTGATGCGTTT
GAAATTGCGCACTTGTccaaatatttacaaaaagtgaTTCCAAAATGTGC
GGAAAGTAATACATATTCTGGAGAAGACGATGATGAAGATCAAGAGAATG
GCAATTCTGACGCTCAATGTACTCATCTGCAAGAaggtatttatttttgt
tttcatagcATAGCCATAGCATTTTTCGGGGGGACAAAGaatctttaaaa
gaatttccagggttgtgatatttttaagaaaagtcTAAATAATACgaaat
aagacttttttagTCTGTTCAATACTGTGTTTATACTATTTTATTCTTAC
CAATGATTTTGAAttattctttttcttcaaaagcaAGATTACTGGATTTT
ATCTATGTCCTTACTTCTGTTACTGAAATCTCTACAAtataagaaaagtt
tgaaattgaTTAATAGATATAACTTCAATATTTATCTACAGTTCTTCCAA
AAGCAATCAATCACCCTATTCGGGCTGTTCCTACAACGTCATCATCAACA
ACCATACCTTTCAAAACCAACCCAACCAACTCAGTCAAGCATACCACACT
CAAACCATCTCAATCACAATCTTTTACTGGGCGATCCCAGAATGCAACAA
AACAACACATTTATAATCCAACTAGAGGATTTACTTCAAGAAAACCGATC
ACAACACCAACAGTTGACAATAATGATGTCGATGATCGCTCAGACAATCG
AAAT

Coding sequence (CDS) from alignment at sc0000261:142408..146811+

>TCONS_00017223 ID=TCONS_00017223|Name=TCONS_00017223|organism=Clytia hemisphaerica|type=CDS|length=6915bp|location=Sequence derived from alignment at sc0000261:142408..146811+ (Clytia hemisphaerica)
atgTTATTGAGGGACATGGAAAAATGCACATGCACACTGCTTGACCCAAA
AAGAAGCAAGCAAAAGTCCAGCATTCATTTTCAATTGAATACATTCTGGG
TTTCAATTTTATTAGTTACTGTACTTGTTGATCAAGCTTTTTCTTGGAGG
ACTGACGATCTATATAGAGATAAAAGAGGAAGGCAACAAGACTTTAATGA
TTATGAGACATCAAATGAATATGACTCTTCAAATGATAGACAGCCATCTG
CTGCATCTCGCCATCATCATCGCTCAAGGATTTCTAGCAGTTTTCGTAGA
GATTACAGGACTTGTGTACAAGGTGGCGAATATCTAAGAGGATTTACGCT
TGAAGGAGGCACAAAAGCAGGAAATTTTACTAGGTTAGGGGATGCAGATA
CGCTGAATGAATGTGCTTCTTTGTGCTGTATGCGGAAATCTTGTCAACAA
GCGCTACTTTTGACTCAACCAGATACTGGATACAAGACATGTTTTCAAGT
TGTTTGTACAAAATCAAGTTCTTGTAAAGCAATCAGTGATAGAGATTCAA
ATTATAACCCACAACTTTTTAGAAAAGGTTCAGCAAGCAGTAACAAAAAA
GTGGCTACCTCAGAGGTTGATTCACACAGCATCATATCAAATGACACAGC
ACTAGATAAAGATTTACCAGCACTTGTGAGAGTTAAACGAGGGAAAGGAT
TTTGTCGACAGATTTCTGGTCATGCATGTGCGAATTATGTTGATCCCAAT
GCAATGTATTATTTCACAAGTAACAAGAATAACACAGACTTGGACAAAAG
ATTACAAAAACCCATTAAACTGATTAGCAGCCGTTTGACTGGAAAATGCA
AAACCATTGCTCTTCAAGCTATATGTTACCGCTTCTATCCACAATGCTCT
AAACTTTCAAGCACACCAAAATCAATAAATGTTTGTGAAGATGAATGCAC
TGAAATTCTTGCAGGAGATTGTTCTGATGCGTTTGAAATTGCGCACTTGT
ccaaatatttacaaaaagtgaTTCCAAAATGTGCGGAAAGTAATACATAT
TCTGGAGAAGACGATGATGAAGATCAAGAGAATGGCAATTCTGACGCTCA
ATGTACTCATCTGCAAGAagTTCTTCCAAAAGCAATCAATCACCCTATTC
GGGCTGTTCCTACAACGTCATCATCAACAACCATACCTTTCAAAACCAAC
CCAACCAACTCAGTCAAGCATACCACACTCAAACCATCTCAATCACAATC
TTTTACTGGGCGATCCCAGAATGCAACAAAACAACACATTTATAATCCAA
CTAGAGGATTTACTTCAAGAAAACCGATCACAACACCAACAGTTGACAAT
AATGATGTCGATGATCGCTCAGACAATCGAAATatgTTATTGAGGGACAT
GGAAAAATGCACATGCACACTGCTTGACCCAAAAAGAAGCAAGCAAAAGT
CCAGCATTCATTTTCAATTGAATACATTCTGGGTTTCAATTTTATTAGTT
ACTGTACTTGTTGATCAAGCTTTTTCTTGGAGGACTGACGATCTATATAG
AGATAAAAGAGGAAGGCAACAAGACTTTAATGATTATGAGACATCAAATG
AATATGACTCTTCAAATGATAGACAGCCATCTGCTGCATCTCGCCATCAT
CATCGCTCAAGGATTTCTAGCAGTTTTCGTAGAGATTACAGGACTTGTGT
ACAAGGTGGCGAATATCTAAGAGGATTTACGCTTGAAGGAGGCACAAAAG
CAGGAAATTTTACTAGGTTAGGGGATGCAGATACGCTGAATGAATGTGCT
TCTTTGTGCTGTATGCGGAAATCTTGTCAACAAGCGCTACTTTTGACTCA
ACCAGATACTGGATACAAGACATGTTTTCAAGTTGTTTGTACAAAATCAA
GTTCTTGTAAAGCAATCAGTGATAGAGATTCAAATTATAACCCACAACTT
TTTAGAAAAGGTTCAGCAAGCAGTAACAAAAAAGTGGCTACCTCAGAGGT
TGATTCACACAGCATCATATCAAATGACACAGCACTAGATAAAGATTTAC
CAGCACTTGTGAGAGTTAAACGAGGGAAAGGATTTTGTCGACAGATTTCT
GGTCATGCATGTGCGAATTATGTTGATCCCAATGCAATGTATTATTTCAC
AAGTAACAAGAATAACACAGACTTGGACAAAAGATTACAAAAACCCATTA
AACTGATTAGCAGCCGTTTGACTGGAAAATGCAAAACCATTGCTCTTCAA
GCTATATGTTACCGCTTCTATCCACAATGCTCTAAACTTTCAAGCACACC
AAAATCAATAAATGTTTGTGAAGATGAATGCACTGAAATTCTTGCAGGAG
ATTGTTCTGATGCGTTTGAAATTGCGCACTTGTccaaatatttacaaaaa
gtgaTTCCAAAATGTGCGGAAAGTAATACATATTCTGGAGAAGACGATGA
TGAAGATCAAGAGAATGGCAATTCTGACGCTCAATGTACTCATCTGCAAG
AagTTCTTCCAAAAGCAATCAATCACCCTATTCGGGCTGTTCCTACAACG
TCATCATCAACAACCATACCTTTCAAAACCAACCCAACCAACTCAGTCAA
GCATACCACACTCAAACCATCTCAATCACAATCTTTTACTGGGCGATCCC
AGAATGCAACAAAACAACACATTTATAATCCAACTAGAGGATTTACTTCA
AGAAAACCGATCACAACACCAACAGTTGACAATAATGATGTCGATGATCG
CTCAGACAATCGAAATatgTTATTGAGGGACATGGAAAAATGCACATGCA
CACTGCTTGACCCAAAAAGAAGCAAGCAAAAGTCCAGCATTCATTTTCAA
TTGAATACATTCTGGGTTTCAATTTTATTAGTTACTGTACTTGTTGATCA
AGCTTTTTCTTGGAGGACTGACGATCTATATAGAGATAAAAGAGGAAGGC
AACAAGACTTTAATGATTATGAGACATCAAATGAATATGACTCTTCAAAT
GATAGACAGCCATCTGCTGCATCTCGCCATCATCATCGCTCAAGGATTTC
TAGCAGTTTTCGTAGAGATTACAGGACTTGTGTACAAGGTGGCGAATATC
TAAGAGGATTTACGCTTGAAGGAGGCACAAAAGCAGGAAATTTTACTAGG
TTAGGGGATGCAGATACGCTGAATGAATGTGCTTCTTTGTGCTGTATGCG
GAAATCTTGTCAACAAGCGCTACTTTTGACTCAACCAGATACTGGATACA
AGACATGTTTTCAAGTTGTTTGTACAAAATCAAGTTCTTGTAAAGCAATC
AGTGATAGAGATTCAAATTATAACCCACAACTTTTTAGAAAAGGTTCAGC
AAGCAGTAACAAAAAAGTGGCTACCTCAGAGGTTGATTCACACAGCATCA
TATCAAATGACACAGCACTAGATAAAGATTTACCAGCACTTGTGAGAGTT
AAACGAGGGAAAGGATTTTGTCGACAGATTTCTGGTCATGCATGTGCGAA
TTATGTTGATCCCAATGCAATGTATTATTTCACAAGTAACAAGAATAACA
CAGACTTGGACAAAAGATTACAAAAACCCATTAAACTGATTAGCAGCCGT
TTGACTGGAAAATGCAAAACCATTGCTCTTCAAGCTATATGTTACCGCTT
CTATCCACAATGCTCTAAACTTTCAAGCACACCAAAATCAATAAATGTTT
GTGAAGATGAATGCACTGAAATTCTTGCAGGAGATTGTTCTGATGCGTTT
GAAATTGCGCACTTGTccaaatatttacaaaaagtgaTTCCAAAATGTGC
GGAAAGTAATACATATTCTGGAGAAGACGATGATGAAGATCAAGAGAATG
GCAATTCTGACGCTCAATGTACTCATCTGCAAGAagTTCTTCCAAAAGCA
ATCAATCACCCTATTCGGGCTGTTCCTACAACGTCATCATCAACAACCAT
ACCTTTCAAAACCAACCCAACCAACTCAGTCAAGCATACCACACTCAAAC
CATCTCAATCACAATCTTTTACTGGGCGATCCCAGAATGCAACAAAACAA
CACATTTATAATCCAACTAGAGGATTTACTTCAAGAAAACCGATCACAAC
ACCAACAGTTGACAATAATGATGTCGATGATCGCTCAGACAATCGAAATa
tgTTATTGAGGGACATGGAAAAATGCACATGCACACTGCTTGACCCAAAA
AGAAGCAAGCAAAAGTCCAGCATTCATTTTCAATTGAATACATTCTGGGT
TTCAATTTTATTAGTTACTGTACTTGTTGATCAAGCTTTTTCTTGGAGGA
CTGACGATCTATATAGAGATAAAAGAGGAAGGCAACAAGACTTTAATGAT
TATGAGACATCAAATGAATATGACTCTTCAAATGATAGACAGCCATCTGC
TGCATCTCGCCATCATCATCGCTCAAGGATTTCTAGCAGTTTTCGTAGAG
ATTACAGGACTTGTGTACAAGGTGGCGAATATCTAAGAGGATTTACGCTT
GAAGGAGGCACAAAAGCAGGAAATTTTACTAGGTTAGGGGATGCAGATAC
GCTGAATGAATGTGCTTCTTTGTGCTGTATGCGGAAATCTTGTCAACAAG
CGCTACTTTTGACTCAACCAGATACTGGATACAAGACATGTTTTCAAGTT
GTTTGTACAAAATCAAGTTCTTGTAAAGCAATCAGTGATAGAGATTCAAA
TTATAACCCACAACTTTTTAGAAAAGGTTCAGCAAGCAGTAACAAAAAAG
TGGCTACCTCAGAGGTTGATTCACACAGCATCATATCAAATGACACAGCA
CTAGATAAAGATTTACCAGCACTTGTGAGAGTTAAACGAGGGAAAGGATT
TTGTCGACAGATTTCTGGTCATGCATGTGCGAATTATGTTGATCCCAATG
CAATGTATTATTTCACAAGTAACAAGAATAACACAGACTTGGACAAAAGA
TTACAAAAACCCATTAAACTGATTAGCAGCCGTTTGACTGGAAAATGCAA
AACCATTGCTCTTCAAGCTATATGTTACCGCTTCTATCCACAATGCTCTA
AACTTTCAAGCACACCAAAATCAATAAATGTTTGTGAAGATGAATGCACT
GAAATTCTTGCAGGAGATTGTTCTGATGCGTTTGAAATTGCGCACTTGTc
caaatatttacaaaaagtgaTTCCAAAATGTGCGGAAAGTAATACATATT
CTGGAGAAGACGATGATGAAGATCAAGAGAATGGCAATTCTGACGCTCAA
TGTACTCATCTGCAAGAagTTCTTCCAAAAGCAATCAATCACCCTATTCG
GGCTGTTCCTACAACGTCATCATCAACAACCATACCTTTCAAAACCAACC
CAACCAACTCAGTCAAGCATACCACACTCAAACCATCTCAATCACAATCT
TTTACTGGGCGATCCCAGAATGCAACAAAACAACACATTTATAATCCAAC
TAGAGGATTTACTTCAAGAAAACCGATCACAACACCAACAGTTGACAATA
ATGATGTCGATGATCGCTCAGACAATCGAAATatgTTATTGAGGGACATG
GAAAAATGCACATGCACACTGCTTGACCCAAAAAGAAGCAAGCAAAAGTC
CAGCATTCATTTTCAATTGAATACATTCTGGGTTTCAATTTTATTAGTTA
CTGTACTTGTTGATCAAGCTTTTTCTTGGAGGACTGACGATCTATATAGA
GATAAAAGAGGAAGGCAACAAGACTTTAATGATTATGAGACATCAAATGA
ATATGACTCTTCAAATGATAGACAGCCATCTGCTGCATCTCGCCATCATC
ATCGCTCAAGGATTTCTAGCAGTTTTCGTAGAGATTACAGGACTTGTGTA
CAAGGTGGCGAATATCTAAGAGGATTTACGCTTGAAGGAGGCACAAAAGC
AGGAAATTTTACTAGGTTAGGGGATGCAGATACGCTGAATGAATGTGCTT
CTTTGTGCTGTATGCGGAAATCTTGTCAACAAGCGCTACTTTTGACTCAA
CCAGATACTGGATACAAGACATGTTTTCAAGTTGTTTGTACAAAATCAAG
TTCTTGTAAAGCAATCAGTGATAGAGATTCAAATTATAACCCACAACTTT
TTAGAAAAGGTTCAGCAAGCAGTAACAAAAAAGTGGCTACCTCAGAGGTT
GATTCACACAGCATCATATCAAATGACACAGCACTAGATAAAGATTTACC
AGCACTTGTGAGAGTTAAACGAGGGAAAGGATTTTGTCGACAGATTTCTG
GTCATGCATGTGCGAATTATGTTGATCCCAATGCAATGTATTATTTCACA
AGTAACAAGAATAACACAGACTTGGACAAAAGATTACAAAAACCCATTAA
ACTGATTAGCAGCCGTTTGACTGGAAAATGCAAAACCATTGCTCTTCAAG
CTATATGTTACCGCTTCTATCCACAATGCTCTAAACTTTCAAGCACACCA
AAATCAATAAATGTTTGTGAAGATGAATGCACTGAAATTCTTGCAGGAGA
TTGTTCTGATGCGTTTGAAATTGCGCACTTGTccaaatatttacaaaaag
tgaTTCCAAAATGTGCGGAAAGTAATACATATTCTGGAGAAGACGATGAT
GAAGATCAAGAGAATGGCAATTCTGACGCTCAATGTACTCATCTGCAAGA
agTTCTTCCAAAAGCAATCAATCACCCTATTCGGGCTGTTCCTACAACGT
CATCATCAACAACCATACCTTTCAAAACCAACCCAACCAACTCAGTCAAG
CATACCACACTCAAACCATCTCAATCACAATCTTTTACTGGGCGATCCCA
GAATGCAACAAAACAACACATTTATAATCCAACTAGAGGATTTACTTCAA
GAAAACCGATCACAACACCAACAGTTGACAATAATGATGTCGATGATCGC
TCAGACAATCGAAAT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_009639	XLOC_009639	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00017223-protein	TCONS_00017223-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000261	supercontig	sc0000261:142408..146811 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.364663	0.307628	0.397072	0	1.63077	2.68792	2.85386	3.24232	1.3242	0.277493	4.1467	2.29549	2.16433	1.55953	1.3993	3.55167	2.83982	1.80255	0	0	2.76853	1.66298	1.03291	0.935174	1.4114	2.71515	0.463547	0	0.640931	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR020067	Frizzled_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00017223 vs. Swiss-Prot (Human)

BLAST of TCONS_00017223 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00017223 (transcript) - C. hemisphaerica