MSTRG.14619.1.p1 (mRNA) -

Overview
NameMSTRG.14619.1.p1
Unique NameMSTRG.14619.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000123_pilon:254096..257685-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14619.1.p1 ID=MSTRG.14619.1.p1|Name=MSTRG.14619.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3590bp|location=Sequence derived from alignment at sc0000123_pilon:254096..257685- (Clytia hemisphaerica_ch_hm2_pilon)
AGCTCCAAAAACGCCCATTTCTGACGCCCTCTTAAAACGCCCTTTCAAAA
AAATTATATAATCAAAACATCAAAACAAAATATAAAATCGGTTTTTGGTT
TTGCGTTGTGGTGACTTTGTAACCTTGTGTGTCATCTTTCTTCCATCCTT
ACCTACTCAATAATGGGATCAATTATATCTGTTGTTGGTCCATACCATAG
ACCAATTACTATAGTTTTATCAACAGCCCTGGTTGGTGGAGCTCATTTTC
TTACAAGTGCAAAAAATACCTCTTCAGCGCTTGTTGATTTGGGACATCTT
GGCTCTTTTGCAGTATGGTTTGGATCACAATTTTGGGTTACATTTGTTGC
AGGTATACATATTTTTATCAATTTGGAGATTGGGCTGTAAAAATATAAGA
CCTTACTAGACTCTCCCACTCAATACGTCAATACAATGGAAAATGATGCG
ATGACCATCAGAAACCAATTGATGGATCATGGATTATATTATCGATTGAT
GATTCCTATTATCAACAAAAGAAAGACAATTGCTAATCAGGTTGGGCCGG
GCCAATTTGTATTTGTATTTGGTTGAGTTGCAGAAGGCTTTAGAGGTGTA
TTCTCGCAACTATAATAAACGCTTACCACTTACTAATGAGCGTCCTGTCA
GCACCCTTGAACTGACTACCCAATTCCCCTCACATGGCATGGGTTGACCC
GGGCGAAGGAACGTTCACTTGCCAAGTGAACTGGTGTGAGTGGGAATCAA
ACCCTGGCCTCCTGCACAGAAGCCAAGGTCGACTACTACTATACCACGGC
ACCACCACAATGGCTGAGTGTGGTTTTAGGTTGGGTAGATTGGCTAAAGT
TTGCTGGTTGGCTTAAGTGTTGTTAGTTGTTGATAAACTAGTTGTTTTAT
TGGCTGTGTTGACAGGTATATAGGTGTTGCTGTTGGCTAATACTACTAAA
GCAAGAAGGTGAAAGGCTGAAAGTGTGTAGATAATTTTGGGTAAAGCTGG
CTGGTTGGCTAGCTAAAACTGCTTAAAATATTTCTTGCAGGTGTTATTCA
ATAGTCGCTCCTCCTCCTTAAGAAGGGTTCTTTGCCTATTGATTGATCCA
TTATTGACAGTTAGTCACACTAGCGTCCCACCATAATGCGTATCAAAGAT
TAATGCTGCGAAAGGGCTATATCGTTTACTTGACTTCTAAAGGGATTCAT
GAAAAAATAACCCAGCACTTTTTAATGAAATTAACATTTTCAAAAACTAT
GGGAAATTGCCTAAAATTTGAGCCATATAGGAAAAAATTTGAGCCAAGCA
AACCTTGAAAACGAATTTGAAAATCAACTTCCCAAGAAAAAGATCTACGG
GGGAGACGGAATCCACCTAGATCTGCACACCGCAGGATAGGATATTTCCC
AGAAATTTCACTGGACCTCAAACATTGACTCATTTACATGTGCAGAATTA
TTTTTACATTAGCGTAGATAAACATGTCCTTAAAAATCAAAGCGTCTCGG
GAATTGAGTGACAAAATTTGGTTGGTTGATATTCTAGTTCTATTGAATTA
TCACATCTGTTTAAAATCACGAAAATGTACATTTTGGTGAATTTAAACAT
AAAGAATAAAATAAAATAAAAAGTTAAAAACATTAGCGCAAGATGTTCTA
AGACGCTGGTAAAAATGTGGAAAGCACAAAAGTAGGTGTAGACTCAAAAT
GTCAAAGTGTAAGAGTCTGATTGCTGCACATTTGCATATATTTTTCCTAC
TATGTTAGTGATAATTAGCATTATTTTCATGCAGAAATTTCGTTTCTATC
CTATTGGGAGAGCAGGCTTCGTCATTTAAAAATTCTAGGCGTGTCAATCA
CACTCCTAAACCATTAATTTTAGGAGTTTCAGGCATGTGATAAGGTGTGT
GATGCACTACTTTTAACTGTAAACTCAAAATTTAATGTGTGTGATTTATC
ACTCTCCTAAGAGGCTTTTAGATATTTGTGGAGGCATGCGCGTGCTATCG
CACGCCTCAAACAATGCAGCCTGGGAGGGCTGGTGTAGGCAGTGTTTTTA
ATGGAGCTGCTTGTATTCAGATTTGTCAAATGAAGCACTTTCAAAAGGGT
AACAGAAGGAGCATAAAATATCTGATTTTATGCTATGTCAACCAACCCTA
TCAAACCAACTCTTGTAATGAAACCATCAAATTCTGATGATGTATTTTGT
TGCTGAATTATTATGTTTTATACTATTCTTTTTATTTATGCTAAGGTTTG
ACTATGGTCACAATACTTCCACGTAACTGGTTTGCCAAAGTACAACGTGT
TTTATTTGATCATTATTTCTTGGGAGGTGTTCTTATGAACAGTGCAATGT
TATCAACTTTCATGATCAAACATCCATTCTCGACTTGGCATGGTCAAACT
TCTGTCATGGTACGGATTTCATAAATTACAACCTCTCTGACAAAATTATT
TTGTGAAGTCACTACAATGAAGCATTCACATAATACTTTAATGGGATTGA
TTTCACGGGCATTAAATTTTGCAGATTTAGCGAAATTTGAAAAAGTCTAT
TCTGTAAAATCTCTTTGAATTAAATTCCAAAAATGTCAAAAAAACACTTT
TAACATGTTTACTGCCATCAAAAAAGCGCTAATAATGCATATTTCACAAA
CAACATGCATAGTTTGGCAGTGAAATAGCAAAATAGCACAAAATCGTGAA
AATATTATCTCACAACAATAGAGTCATCTGCAAAATTGAGTCCCTGCAAT
CTTAAAATTTTGAGGATGAGCTCAACCGCGAAAATTAATCCCATGAAAGT
TGGTTATAAGCTGGTCTTTGTCTGTTTAGCTTCTTAATTAATTTCCTCAC
CTTTACTGAGAAACACTGATTGGATAGATTATTATTCTTCACTTGTAACT
CACTTGTAACCAGAGAGAAAAGACTATTTTTGGTGATTCCACTCTTTCTC
ATTTTATCTTGGAATTAGAGGTTGGTAGCTGACACTACACTGATTTATGG
TAAGACATTTGACATAATTTTTAGAATTTGTATTTTGTTGGTTTAGTGAA
TTCGTTTCACATCATCTTCATCTTTTTTTTAATAAACAGGGAAACGGTTT
GATTGCTAGTTTGGCTTGTGTTGGTATGAATTGTTTTCTTGTGAAGCCTT
GGGTGACAAATACCAGTAAAATCATGCAAGATTTTGAAGGAGATCGTGGC
TTGGGAAATGAACCTGGATCTATTAAAGATAAAAACATTTTGACTGACCC
AAAATATGTTGTAATCAAGAAAGAGTTTGTGAAAGCTCACTCACTTTCAG
CTATATTGAATCTTTTTAACATGTGCTTCTCTACATACCATCTTTGGTAT
TTAGGAAGTCATATTTCTTTTTAGAATTTATCCATCATATTTACACTCTT
AATTTGTAGTTAGGTTTTTACTTTAATTTCAAGTTTGTATACAAAGAAAG
AGTGTCAATGGTTTTAAATAAATTTTGTTTGTTTTTTTGATAAGCTTTGT
TGATATTTTTTTGTATTTTTAGATAATGTAGAATTTTAATCTAATATTTC
AGTATGTTTTCAAAACAACTTTATGTTGACTTATATTAAC

Coding sequence (CDS) from alignment at sc0000123_pilon:254096..257685-

>MSTRG.14619.1.p1 ID=MSTRG.14619.1.p1|Name=MSTRG.14619.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1917bp|location=Sequence derived from alignment at sc0000123_pilon:254096..257685- (Clytia hemisphaerica_ch_hm2_pilon)
GGAAACGGTTTGATTGCTAGTTTGGCTTGTGTTGGTATGAATTGTTTTCT
TGTGAAGCCTTGGGTGACAAATACCAGTAAAATCATGCAAGATTTTGAAG
GAGATCGTGGCTTGGGAAATGAACCTGGATCTATTAAAGATAAAAACATT
TTGACTGACCCAAAATATGTTGTAATCAAGAAAGAGTTTGTGAAAGCTCA
CTCACTTTCAGCTATATTGAATCTTTTTAACATGTGCTTCTCTACATACC
ATCTTTGGTATTTAGGAAGTCATATTTCTTTTTAGGTTTGACTATGGTCA
CAATACTTCCACGTAACTGGTTTGCCAAAGTACAACGTGTTTTATTTGAT
CATTATTTCTTGGGAGGTGTTCTTATGAACAGTGCAATGTTATCAACTTT
CATGATCAAACATCCATTCTCGACTTGGCATGGTCAAACTTCTGTCATGA
TGGGATCAATTATATCTGTTGTTGGTCCATACCATAGACCAATTACTATA
GTTTTATCAACAGCCCTGGTTGGTGGAGCTCATTTTCTTACAAGTGCAAA
AAATACCTCTTCAGCGCTTGTTGATTTGGGACATCTTGGCTCTTTTGCAG
TATGGTTTGGATCACAATTTTGGGTTACATTTGTTGCAGGGAAACGGTTT
GATTGCTAGTTTGGCTTGTGTTGGTATGAATTGTTTTCTTGTGAAGCCTT
GGGTGACAAATACCAGTAAAATCATGCAAGATTTTGAAGGAGATCGTGGC
TTGGGAAATGAACCTGGATCTATTAAAGATAAAAACATTTTGACTGACCC
AAAATATGTTGTAATCAAGAAAGAGTTTGTGAAAGCTCACTCACTTTCAG
CTATATTGAATCTTTTTAACATGTGCTTCTCTACATACCATCTTTGGTAT
TTAGGAAGTCATATTTCTTTTTAGGTTTGACTATGGTCACAATACTTCCA
CGTAACTGGTTTGCCAAAGTACAACGTGTTTTATTTGATCATTATTTCTT
GGGAGGTGTTCTTATGAACAGTGCAATGTTATCAACTTTCATGATCAAAC
ATCCATTCTCGACTTGGCATGGTCAAACTTCTGTCATGATGGGATCAATT
ATATCTGTTGTTGGTCCATACCATAGACCAATTACTATAGTTTTATCAAC
AGCCCTGGTTGGTGGAGCTCATTTTCTTACAAGTGCAAAAAATACCTCTT
CAGCGCTTGTTGATTTGGGACATCTTGGCTCTTTTGCAGTATGGTTTGGA
TCACAATTTTGGGTTACATTTGTTGCAGGGAAACGGTTTGATTGCTAGTT
TGGCTTGTGTTGGTATGAATTGTTTTCTTGTGAAGCCTTGGGTGACAAAT
ACCAGTAAAATCATGCAAGATTTTGAAGGAGATCGTGGCTTGGGAAATGA
ACCTGGATCTATTAAAGATAAAAACATTTTGACTGACCCAAAATATGTTG
TAATCAAGAAAGAGTTTGTGAAAGCTCACTCACTTTCAGCTATATTGAAT
CTTTTTAACATGTGCTTCTCTACATACCATCTTTGGTATTTAGGAAGTCA
TATTTCTTTTTAGGTTTGACTATGGTCACAATACTTCCACGTAACTGGTT
TGCCAAAGTACAACGTGTTTTATTTGATCATTATTTCTTGGGAGGTGTTC
TTATGAACAGTGCAATGTTATCAACTTTCATGATCAAACATCCATTCTCG
ACTTGGCATGGTCAAACTTCTGTCATGATGGGATCAATTATATCTGTTGT
TGGTCCATACCATAGACCAATTACTATAGTTTTATCAACAGCCCTGGTTG
GTGGAGCTCATTTTCTTACAAGTGCAAAAAATACCTCTTCAGCGCTTGTT
GATTTGGGACATCTTGGCTCTTTTGCAGTATGGTTTGGATCACAATTTTG
GGTTACATTTGTTGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14619MSTRG.14619Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14619.1.p1MSTRG.14619.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14619.1.p1.exon3MSTRG.14619.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14619.1.p1.exon2MSTRG.14619.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14619.1.p1.exon1MSTRG.14619.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000123_pilongenomesc0000123_pilon:254096..257685 -