|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:385712..389048- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13872.3.p1 ID=MSTRG.13872.3.p1|Name=MSTRG.13872.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3337bp|location=Sequence derived from alignment at sc0000113_pilon:385712..389048- (Clytia hemisphaerica_ch_hm2_pilon)
AGATCTTTGGAGTGAAGTGTTTCATATAAGTTTTGCAGAACTTTTGGCTG
TCATTTTGTTGAGAAAAGGAAACTTTTTGCTGATATTTTAATTTGATTAA
AATAAAATGGTAGAAGAAAACTTTCCAATCATAGATATATCATCACTGGT
ACAAACTCAATGTCAAGATGAAACCATTTTACAAGAAGCAGCCAATCAAT
TGATGGATGGTTTTAGTAAATGGGGATTTATTTATTTGAAAGGTCATCCT
ATTCCTGAAGAATCGATTGCAACATTATTCAAAGAATCTGAAAATTTCTT
TACACAACCTGTCGATAAGAAACGAGAAGTAGAAATGGACGCAACAGATA
GTGATTATATTATGGGGTATGTTCCATTCAAAATGGAAAGAATCGATCCT
AGAAAACCCTTTGATCTCAAAGAAGCCTTTGATTACAAACACCATATCCG
ACAAGATATGAAACAAAAATTGCCACCGCAATTTACAAAAAGCCTCGAAA
ATTTCTTTGACGAATGTTATGATTTGTCATTGCTGCTGTTCAAATTACTC
AATAAATCCTTGGATATTGAGGATGATCAATTTTTCCCAAATTGCCACCG
AAAGTCTGGTTATTTTGGAAATGGGACCTTGTTAAGGTCTTTATATTATC
CTGGTATAGATTCTAAAGATATTCTTCCAGAGCAAAGTAGATGTGGAGTG
CATGCAGATTATGGAACACTAACTTTGTTGTTCCAAAACGCAGAGGGTTT
AGAGGTAAAACTATTCAGTGTTCAAAGTTTTCGAGTCTGCTAAATTGCGT
GGGTTGCGTGGGTGCGTGGGTCAATATTTTTGCGTGGGTTGATATTTTTG
CATGGGTCATTTTTTTGCGTGGGTGCGTGGGTCAAAATATTTTTTGCGTG
GGTCAATTTTTTTGCGTGGGTCAATTTTTTTTGCGTGGGTCAAATTTTTT
GCGTGGGTCATTTTTTTTGCGTGGGTAAAAAATTTTGCGTGGGCCATATT
TTTTTGCATGGGTCATTATTTTTTGCGTGGGTCATATTTTTTGCGTGGGT
CATTATTTTTTGCGTGGGTCAAAGTTTTTGAGTGGGTCACTATTTTTTGG
TGATTTTTTAGCTAACTCGATTTTTTTACCAAATTAAAACTTTCGAGTTA
GCTTAGACGTTTTTTTTGTCAAATCTTGGTCAAGTTAAAATTTTCAAGTT
ATCTTATACAAAAATGTGTTGTGTATAAATCTACGAAAACTAAACAAAAG
CACACAGTTTTTATGTAGTAACACCTTGTGGTTTATTTTACATAGCTGCA
CTTATTTACTATAACATTATACAGAATCAACACACACCCGCCTAATTTTT
GTAGACACACTTCAGGATCACACTTTTGAATTTTAGCATGCTATATTTCA
AGATTCCAGTGTCATGGAAATAAACACTATAACTTTAATTTTCTCCTCCC
TTTTCTATTGCTTTGAAAAAAAGTACAGCGTCTTTATTTCGTCCAATTTT
TTAAATTGGCCTTTAATGTACTTAAATCAAAGAAATTACAAGTGGGGTGG
ACGAAATAATTGACAACGATTAAATTGTTTAGTAATCGGTCGCCTAATGA
ATATAACTTTTGTAGAAAAATTTTCAGATTTTGTCGCCATTTGCTTTGTT
CTTTAACACTCAAAGGAAACCCAAAAGATTAAAGCGTTGCTATAAGAAGC
TTTAAAGCTTCTAAAAAGATTCTACACGTTTTTTTATATAAGAACAAACT
ATATAAAAACATAAGGCTTCAAATCCAAAAAACTAAGAACATCCAAAGGC
TTCGAAAATTGTTGACGTTCTTATAAAAAAAACGTGTATAAAGCTTCCTC
TTATAAAAAGACAGCTACAGCTATGCAACATAAACAAAATAACCAAAACG
TGTTATGTAAAACACATCCAACATTTTGGATGTGACCAGTTCGAATTTCA
AGGGAAGGTATTTTTTCGAATTACAGAGAGAATTTCGACCCACGCAAAAA
TTTTGACCCACGCAAAAAATATGACCCACGCAAAAAAAATTGACCCACGC
AAAAAATATTTTGACCCACGCAAAAAATTTGACCCACGCAAAATTTTTGA
CCCACGCAAAAAATATTTTGACCCACGCACCCACGCAAAAAATTGACCCA
CGCAAAAATATCGACCCACGCACCCACGCAACCCACGCAATTTAGCAGAC
TCAAAGTTTTCCCGTCTCAGACGGATTTCCGTCTCAGCGAGGTACAAAAA
AAGACTTTTCCGTCTCCAAATTCAACAAAATTCTGCAAAACATGAATAAT
ATGGCCAGATTTGTTGTTCAAAGTCCATTTCCGTCTGTGATGAAAATTTT
GCTTTGACCACTGCTATATTTATGATCATTTCTAACTTTTTTACTGGCTT
ATACATTTGTATTAGAAGGTCGTATAAGAAGTAAATAGTGTCCTCTAGTG
GTGTCAGCCAGGACTTGTCCATTTAAGTCTTTTTTTAACAACTTACTTTT
AATTCTAGCTTTTAAAGGACTTTGATGCAATGATATAACTAAAAAATTAG
TGTCATCTTTCCCTCAGGTTAAATCACCATCAGGGAATTTCATCAAAGCG
AAATTGATCGAAGGAACAATTATAGTGAATGCAGCTGATCTTTTAGAACG
TTGGTCAAGTGGACGAATCAAATCTACTTTACATCGTGTTTCCTTACCGA
AGGATACAAACCAACCAAGACAATCAGTTGCATTCTTTGTGATGCCTGAC
AACGAATGTATAGTGGAATGTTTAGATGGCTCCAATACTTACGAACCAAT
CACAGCTTTCGATCATATTGACAATATGTACAAAGCCACATTCAGAGATT
GAAAATTAACAACAGACTTTGCACCCACATTCCTCTTGGTTTGTTTTCAT
GATTTACTGACCGAAATTAACGTTTGTGTGGCATACTCTTTGTTGTCAAA
ATAATTAGAAGATATTAAGTAATTAAAGTGGTGCATATTCAATTTTTTTA
AATGTTCTTCTACACATCCATGCATGGACACTTGGACACAATTCCACAAC
ACAAAATTTAGTTTTTTATACTTAAAGCTTTGGCATATTTTTGTTTTCTC
TTATATTTATATTTTGATAAAATTTATATTTTGATAAAACCTTTTTTTTT
TACTTGTTTTTATATTTCTCATATATATATTTTTTTGATTAGGAATTCAT
ACAAATCTTGAGTACCTTAAGGGAACTCGCCAAAATTCGCCAAAATTAGT
TCCCGCCAAAATTAAATATTTTGCTCACTCGCCAAAATAAGTTCCCGCCA
AAATTTAAATTTTTTGTTTCCTTGCCTATTAATAACC Coding sequence (CDS) from alignment at sc0000113_pilon:385712..389048- >MSTRG.13872.3.p1 ID=MSTRG.13872.3.p1|Name=MSTRG.13872.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1866bp|location=Sequence derived from alignment at sc0000113_pilon:385712..389048- (Clytia hemisphaerica_ch_hm2_pilon)
GTTAAATCACCATCAGGGAATTTCATCAAAGCGAAATTGATCGAAGGAAC
AATTATAGTGAATGCAGCTGATCTTTTAGAACGTTGGTCAAGTGGACGAA
TCAAATCTACTTTACATCGTGTTTCCTTACCGAAGGATACAAACCAACCA
AGACAATCAGTTGCATTCTTTGTGATGCCTGACAACGAATGTATAGTGGA
ATGTTTAGATGGCTCCAATACTTACGAACCAATCACAGCTTTCGATCATA
TTGACAATATGTACAAAGCCACATTCAGAGATTGAATGGTAGAAGAAAAC
TTTCCAATCATAGATATATCATCACTGGTACAAACTCAATGTCAAGATGA
AACCATTTTACAAGAAGCAGCCAATCAATTGATGGATGGTTTTAGTAAAT
GGGGATTTATTTATTTGAAAGGTCATCCTATTCCTGAAGAATCGATTGCA
ACATTATTCAAAGAATCTGAAAATTTCTTTACACAACCTGTCGATAAGAA
ACGAGAAGTAGAAATGGACGCAACAGATAGTGATTATATTATGGGGTATG
TTCCATTCAAAATGGAAAGAATCGATCCTAGAAAACCCTTTGATCTCAAA
GAAGCCTTTGATTACAAACACCATATCCGACAAGATATGAAACAAAAATT
GCCACCGCAATTTACAAAAAGCCTCGAAAATTTCTTTGACGAATGTTATG
ATTTGTCATTGCTGCTGTTCAAATTACTCAATAAATCCTTGGATATTGAG
GATGATCAATTTTTCCCAAATTGCCACCGAAAGTCTGGTTATTTTGGAAA
TGGGACCTTGTTAAGGTCTTTATATTATCCTGGTATAGATTCTAAAGATA
TTCTTCCAGAGCAAAGTAGATGTGGAGTGCATGCAGATTATGGAACACTA
ACTTTGTTGTTCCAAAACGCAGAGGGTTTAGAGGTTAAATCACCATCAGG
GAATTTCATCAAAGCGAAATTGATCGAAGGAACAATTATAGTGAATGCAG
CTGATCTTTTAGAACGTTGGTCAAGTGGACGAATCAAATCTACTTTACAT
CGTGTTTCCTTACCGAAGGATACAAACCAACCAAGACAATCAGTTGCATT
CTTTGTGATGCCTGACAACGAATGTATAGTGGAATGTTTAGATGGCTCCA
ATACTTACGAACCAATCACAGCTTTCGATCATATTGACAATATGTACAAA
GCCACATTCAGAGATTGAATGGTAGAAGAAAACTTTCCAATCATAGATAT
ATCATCACTGGTACAAACTCAATGTCAAGATGAAACCATTTTACAAGAAG
CAGCCAATCAATTGATGGATGGTTTTAGTAAATGGGGATTTATTTATTTG
AAAGGTCATCCTATTCCTGAAGAATCGATTGCAACATTATTCAAAGAATC
TGAAAATTTCTTTACACAACCTGTCGATAAGAAACGAGAAGTAGAAATGG
ACGCAACAGATAGTGATTATATTATGGGGTATGTTCCATTCAAAATGGAA
AGAATCGATCCTAGAAAACCCTTTGATCTCAAAGAAGCCTTTGATTACAA
ACACCATATCCGACAAGATATGAAACAAAAATTGCCACCGCAATTTACAA
AAAGCCTCGAAAATTTCTTTGACGAATGTTATGATTTGTCATTGCTGCTG
TTCAAATTACTCAATAAATCCTTGGATATTGAGGATGATCAATTTTTCCC
AAATTGCCACCGAAAGTCTGGTTATTTTGGAAATGGGACCTTGTTAAGGT
CTTTATATTATCCTGGTATAGATTCTAAAGATATTCTTCCAGAGCAAAGT
AGATGTGGAGTGCATGCAGATTATGGAACACTAACTTTGTTGTTCCAAAA
CGCAGAGGGTTTAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:385712..389048 - |
|
