XLOC_008281 (gene) - C. hemisphaerica

Overview
NameXLOC_008281
Unique NameXLOC_008281
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000198:133421..137954-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008281 ID=XLOC_008281|Name=XLOC_008281|organism=Clytia hemisphaerica|type=gene|length=4534bp|location=Sequence derived from alignment at sc0000198:133421..137954- (Clytia hemisphaerica)
TAAAATTCTGCATAAATAACCTTATCAATCTATTGGTCACAAAAAATGGG TCCTCCTATTGGAGGTGGAGGTGGTGGAAATAAACCACCACCAAGTTTTT TCCCAAACCAAAATGTGGATAACAACCGACAATATCCTCCACAAAATCAA CAACAAACTTTTCAACAAAATGAACAATATAATTCTCAGCCTCCGTACAC TAGTACACCTATTGCTGACCAAGCTGCCAATCACCAATATCAACCTCAGC CTGAACAACGCTCTGTTAGAATGAGGCCACAACCTGCCAACACAAGGCCG CAGTACCCTGGTTATGGGCCTATGGTATCTGGTTCTAGTATACAACAACC ACAAGTTGTACCACCTCCTGGTCAAGAACAACAAGATTTTGATGAAGAAG ATGGAAGACCTGGTTACGGACCAAGAGTCAATGTAAATGTCCATTACCAA GAGGCCCAACAGCAACAGATTGGAAACGCAACTCCTGATATATTTACCTC CTTTCTTGTTAATCGAATGGAAAATGATGGTTATGATGTTCCCCAACAGT TAAGGAGGCGTCAAGGTGGAAACAATGAAAGGTATTTTAATAAAGTGATT ATTAGAAAACACAAAAAATTTATCCTTCCTTTGTAAGTTGAATAATCCTT GGAATTAAAAGAAAGATGCTTTCATTAGAGCACAAATTCTTTTTTATTGC ATTTAGGCAAAAAAGAAATGATTAATTTATTAAATGATTAGGAAATGGAC TCTAAAATTTGGTGACTGAATTCTTGAACTGCGAATAATTTCTTTTCAGA GAGATTGCCAAAGTTTTGCAACGAATTGGTGACGATATGTCAAATCATTC TCAATTAAACAATTTGATTTCTGGAATTCGTGTCACACCTGATACAGTAT ACAAGACATTTTTCAGCGTTGCATCAGAAATTTTCTCAGATGGCAACATT AACTGGGGTCGTATATGTACTTTGTTTTATTTTGCTTATAAACTTGCTAT TCAAGTATTAAATGAAATGCCATTGGTTGATATTGTTATTGATTGGGTGA AACGATATGTATTTGATAAATTGGTTGGCTGGATTCTTGCTAGAGGAGGA TGGGTAAGGTTTATGTTTTGCCATTTTTGGCCTGGTTCAAATAGTGAGAG GCACCCCCCAACCCTTACCTGAGAAAGATCACTATGCCTGCACTGGGTAA CCCCCACATGAAAAAAATGTCATCCCCAGCTGCATAGGTTTACTCCCACC TGAAATTTCTCATCAGCCTAACCCCCACCTTCTTTTAAATATCAATTTCC CATTTGAAATGAAAATTATTATAGTATTGCATAAACAAAAATTTTAAAGA ACCACATTTTTGCTCGAGATCATATATATTGAGAATTTATTGTATTTTAC GTTTATTTAAGAATTCAGAGTTAAGGCGAGGCTTTGCAAATTTTCATATT CCTTTCATCAGAATAACTTTTTCAGTTCGAAAATCCTCGCACTTTATTTA ATTCGATGAATTATATAAGTATTTTTGTTTTCTTTTTAAATTACAGAAAG CTGTACACGAATATTTTGGTGCCACCCCGAAACAATTGGTTTTTGTCTTT CTGGCTGGTGTTGCTATCAGTTCTATGTTTTGGTATTGGAAGAAATAAAA TGAAGATGGTTTTCTCGGAATTTATAATTATGCTGCTCTTGAGAAAAGAT AGATTACTTGGTACTGTAGTCTCAATCTTCAAGTTCGAAAAATGTTCGGT AAGCTCGGATACTTGTCATTAGTTCTTTGTATCAAATTCAAACTTTGTCA TACAGTTTACCTCTCTCTAATTTGATCTTCTGGGCAGTTCTAGGGACGAA CATATTTTTTCGAATTAGAAAAAAAATCAAATTAAAGAGAGGATTTTTGT AAAATTTAATTTTAAACATTTTCAGGTTCATATCAAAGATAAAGTTTTTA GCTTTGTCCTGGAAATATTCTTTTCGATCGTAAGTTTTAGGATAATGATA AATTTGTGCCTTGTTTTAGAAAACTAAATTTTTATTTCTACATTCTAGCT GACAGAAAGACATTTTTAAAGGATTTCTTGAATGTATTTTTTATGATATA ATCATGATTCTCAGAATATTTTTTTTATTTTAAAAGTTTGGAATTTTCTT CGGACTCAGGAAAAAGGTTTTTGATATAACTTTCAATTTTTTTCACTGCC ATAGTGAATACCTTAGCTTTGGTTGCTTGAATACTAAAAGCCCTCGGTGG GGGTGTGTGTGAGCCATAAAGGTCCCCCTTTTCATACCCTCGAAAGTCCC TCAAAGGGGTACAAAAACCATTAAAAAGCAAATTGAGTCTCTGTAAGGGT TCCAAAATTACGAAAATCCAAAATCAACTCCCTCAAGAGGTCATAAATTC TGGGGGAATAGTCTCTCTAAAGGTTAACAAAACGTCAAAAAATTGACAAA ACTTTTGAAATTCAGTCTTTCTAAGGGTCGATTATAAAACTTTGNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNATACATGATATTTTTGTCAATCAATTACAAGTTCCAACCCC CGTTCCATTGTAGCTTTATTTTATTTTTTATAAATTATTTTTTTCTGTGA ACATAAAAAAACTTTTACATAAAATAAGAAAAATATTGATTATTTATATC CAAGGAAATATACAAAATTATTGTTTGTTTTTACGAAATTTATTACATGT ATTATTTTTGGTCTCTTAATTTAAAACTTTTGCTGTTAGGGTTCTTTACC TGATTAGCACTGAATAAGGTTCGATTTTGATTCAACTTCCAAAAGTTTAT GTAAATTTTTAAAACACATATTTTCTTTTGAATAAAATACGAAGCTTTTC GTAAGACAAACTTACATTATCAAGTATAAAATTAAACTAAAATTGAAAAC ATCTTCATATAACACCAAATTTTGGATAATTACATTATGTAAAAGCTCTA AAGAATATATACAATAATGTCGTAAAATTAATGGCTTGTTGGTTTGTTTA GGACTCAATTAATTGATATGTTCCAAGGTATTTCAAGTCGGACAATCGCT TTTGAAATTTTCTAGGACTATAAGACATTAGGTGTCACAAATTCGCCTTT GCTTTTTGTGGGCCTTTTGTAACTCTATTTCTTTAAAAATATTTTTGTTA TTTTAGTGATTAATTAATACACAAAACAAAACAAAATATCATCACAAAAA TGGGTAAATGGAAAACGAATGCAGATTTGGATCATGAATACAAACCTTCA GGATGTAGCCTAGCAACCGATACTCTACCACGAACCACCAGATCTAAACG AAAGATCGAAGTAGCTGAAGACGAAAAACTGAGGAAACTACAGCCTGTTG TTCCTCCACCAAAGATCGAAAGAGTAGAAGAGGATTACGGTCACACTGTA TTTCCAAATGAAATTTGGGACAAGATTTTGATACATCTATCAAAAAAGGA TTTACGGTCATTATCACTTGTGAGTAAAAGCCTCAGGATTCTTACAAATA GATTACTATGGGCTGAACCTAACTTTAAGCCGACCAAGCACGGGCTTAAA GGCGAAGTTTGGGAGACATTATTACATTTGCCAATACGTAAATTACGTTC ACCGGATTTCTTTTTCAAACGTAAAAATGACCATGAGTACATTGCTGAAA TATTGAGTCAAATGCCTCTTTTATCAGAAATTGAAGTGTGCCAGGGCAAA TGGAAAAGTAACCGTATAACCATGAGATCTTTACGAGTTCTTGCACCTTA TGTTACGAAAATCAAGCTCGATTGTGTTCTGCCTGACAACGATTGCACAC GGACTGAATTTTGTGAAGAACTTGCCAAAATTGATTTTCCGAATTTGNGA AAATCAAGCTCGATTGTGTTCTGCCTGACAACGATTGCACACGGACTGAA TTTTGTGAAGAACTTGCCAAAATTGATTTTCCGAATTTGAAGAGTGTGAC TATACCGTATACTGTCTTGCCCGGGTGTTATAACACGATGCATAGTCAAT GTGGTAAGGAAATGTGCGTTCATAGAGTTTCGAGGTATAGGTTAGAAGAT TTTCAACTTATGAAACACTTACCTATTACCGAGTTGAATTTGAACTGTCT GCAACCTGAGTACGAAGTTCTGGATAACGGTTTATGTTATTTCTATCCAG AAGAGCCATACCATTTTCCTCAAATTCCTTATTTGTTGCAGATGAAATCT TTGAATACAGTTGTTGTGAATTTATTTCAAGCTGTATCTGATGATAATTT GGAAAGTTTGAGAGAATTACGTGACAAAAATGGTGTGAATTTGGTTCTTG TTTTTATTAGAAACGATAGACTTCTTGAAAAGTTGAAAGTATGATTTTTA AATATATTTCTTTCAACAAAAGACTGGTTTATATATGATATTTTTTGTAG AAAAAGTTTATAGTAGAAAAATTTCTCACTATATTTACATTTTTTACCCA TAAGACGGTGGGTTGGTCTTTTTAGGCATGCCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014806TCONS_00014806Clytia hemisphaericatranscript
TCONS_00014805TCONS_00014805Clytia hemisphaericatranscript
TCONS_00014804TCONS_00014804Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014804-proteinTCONS_00014804-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:133421..137954 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.61 14.72 49.06 57.78 66.61 51.54 38.98 42.02 22.11 34.73 28.04 13.52 21.1 18.54 22.69 26 37.23 33.6 15.79 23.77 24 24.36 43.19 44.86 28.23 34.86 64.18 45.01 70.84 68.73