XLOC_007486 (gene) - C. hemisphaerica

Overview
NameXLOC_007486
Unique NameXLOC_007486
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000167:418518..426200+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007486 ID=XLOC_007486|Name=XLOC_007486|organism=Clytia hemisphaerica|type=gene|length=7683bp|location=Sequence derived from alignment at sc0000167:418518..426200+ (Clytia hemisphaerica)
AATCGATTAACGTCTCCGctgtgaagaagaagaagaatcatACTTTTCCT TTTTGGAGGGACCGAATACTTCTTATTTCTTGGATTGTGTTTGAAAAGGT TTTCTATCGTCATGAGGATTTTACTATACtttctttatatattttatttc acTGGAATTTCTAGACTTAGAAAACAAGTTTGTGATGTTTGACTGTCACT TAGGATTTTAAAGAACACAGactttataaagaaaaatttagttATGAACT GGATTTATTTCACCAAAATGGATATCAATGTCTGTCTTACTGTTATGACT TCATGGCATCTGGCATATGGTCAAAGACTTCTGGTGTTTTACGAAAATGT TATCTTTGATTACGATGGTCCAACTTTTAATGGTGACATTCGAAATGATT ATCGATTTTCGTCCAAAAATAAGACTTCTTTTATTCGATATCACGACGAT ACGTTAGAACATTGTCAAGACATTTGGCGAAATTTATCATTCAACTCTTT ACAAAAAGATTATGACGGTATAATTTCTTTAACAAAGTCACAAAACCTTT TGAGCAAACAACTTTCATCTTCAAATGAAGTATTGGATATATTATATCAA TTTGAATCAACATTTAGTAGATTGgtaagaaaacttttttatggaaatcA AATTTCATCGACGTTTTAGATCACCTACaccattttttattgaaaaactt atGTTCTTCCCAAAAAGACTTTTCAGCCTTTCAGTACTACTTAATTTTAA AGCANTATTGAAAAACTTATGTTCTTCCCAAAAAGACTTTTCAGCCTTTC AGTACTACTTAATTTTAAAGCATCCACTGATCAGGTAGATTTCCCCCAAG TGGAATTTtttcacacccctgtgtcacagacccactggaaagtttggcaa agatttcgtccccggtgggaaaaaaccttgcaatttcagccccacttgga GATTGACTTGATTTCGTCCCAATTCGAAATTCcaccccactggatttttt aaccttagaacaatagaatgttaatcatcattggaatttcaataggaatt tttatccccaaggaggaaaaagttccaccggggctgtgagacaggttTTT TTCTCTCCGTTATCCTTGCTCTGCCTGCACTCtcgctttttattaatttc ctttttaagactaaattttgacaatttttggtCGAGTTGTTTGCCTTCTT CCTAAACCTTTATCTTTTTATTATCTCTGACATCAGCTGGTATTCTTGAC TTTATCCTTCTAGAAATATGAAACTTTCGTAAAAAATAGTGTATTTGCTA CCAAAAAGCATTCCCCCTGAGTTATACTCATTTTATGACCTCTACAGAAA TGGATGTTATCAAACGATCGACAATACTATTCTTGTGTTTGGCTATCTCC TTTGTTTATCAGCACAGTATCCGCAATATTCAACATTTTACGGACCAAAA ACCTGGCTGTACTCATCGAAGATAACTACTGTTCGAATTTTTTAATGAGG GATATTCAAACATCTTTACTGATGCTAAATGGTAATAAAACAAAGACTAT TTTCAATCCTATTTATGTTGGTTTGGCGCCTCATCAAGAAGCGCGCAATC GTGATCAATTCTATGATCTCTTGGTGGAGGGACAAACAGATTTCCTCATG CTTTTGCAACGTGACCTACACAAACACGTGTTCAAAATGGCggcattttt cagtttgttGGGACCACATCAACGTTGGTtgataccaaattttgatcaaa atgaacCTTTAGGGTTTGGTAATGTATTACCAGGACAGATATTATCTTTC CAGTTGAAGACAAATGACAATTTTGGTGTGACGAAGTTGGCCGATGTTGT TGGATGGATATCTGAAACCTTCCAACATTTTCGGTATGAAGACCATATTT TTGATTCCCTCTCTTTCTTTAGATGATCCTATCGTCTAGAAagacattgt gacgtgccgtggcactcataaggttcgAATTTCCAgggttgtttttcatt tttccaagggggttaaaagttattctaaaattttcagagGCAAAAGACTT TTTTTACTTCGTCCACTCTCACGTCcattaaaagaatttttccaaggatg tttttgcaaattttgccattttcagNTTTTTTaaccttagaacaatagaa tgttaatcatcattggaatttcaataggaatttttatccccaaggaggaa aaagttccaccggggctgcgagacaggttttttttctttccgttATCCTT GCACTGCCTGCACTCtcgctttttattaatttcctttttaagactaaatt ttgacaatttttggtCGAGTTGTTTGCCTTCTTCctaaatttttatcttt ttattatCTCTGAATCTCTGACATCAGCTGGTATTTTTGACTTTATCGTT ctagaaaaatgaaactttcgTGAAAAATAGTGTATTTGCTACCAAAAAGC ATTCCCCCTGAGTTATACTCATTTTATGACCTCTACAGAAATGGATGTTA TCAAACGATCGACAATACTATTCTTGTGTTTGGCTATCTCCTTTGTTTAT CAGCACAGTATCCGCAATATTCAACATTTTACGGACCAAAAACCTGGCTG TACTCATCGAAGATAACTACTGTTCGAATTTTTTAATGAGGGATATTCAA ACATCTTTACTGATGCTAAATGGTAATAAAACAAAGACTATTTTCAATCC TATTTATGTTGGTTTGGCGCCTCATCAAGAAGCGCGCAATCGTGATCAAT TCTATGATCTCTTGGTGGAGGGACAAACAGATTTCCTCATGCTTTTGCAA CGTGACCTACACAAACACGTGTTCAAAATGGCggcatttttcagtttgtt GGGACCACATCAACGTTGGTtgataccaaattttgatcaaaatgaacCTT TAGGGTTTGGTAATGTATTACCAGGACAGATATTATCTTTCCAGTTGAAG ACAAATGACAATTTTGGTGTGACGAAGTTGTCCGATGTTGTTGGATGGAT ATCTGAAACCTTCCAACATTTTCGGTATGAAGACCATATTTTTGATTCCC TCTCTTTCTCTAGATGATCCTATCGTCTAGAAagacattgtgacgtgccg tggcactcataaggttcgAATTTCCagggttgttttttcatttttccaag ggggttaaaagttattctaaaattttcagagGCAAAAGACTTATTTTACT TCGTCCACCCTCACGTCcattaaaagaatttttccaaggatGTTTtagca aattttgccattttcaaggggtatcgacacattttcaataatttttttcc accctcctgtatggttttttaatggagcAGCCCAATGACGGCCCCATTTT GTAATTTGTTATTTATGCTAGAAATGACCAATCACTGATCCACAAAAGTT CCATTCTGTACTCAACACTGATGAGAAGGATGTACCATTCCAATATCCAA TATCGACAATCacctttagaaatattttactaCAATGGTGAAAATCAAGG CGAATGGCAATCCAACCAAGGATTTATGCGTGATAACAAGTTGACCTTTT ATGGCGATGTATTGAATATTCTACGGTCATCTGAAAGTAAGTGATAATTT TACTTACTAGTCTCTATATTTACCTTTCATCGCCTTAAAGCACACACAAA TGTTTCAACCAAAGTGAGTCATCTTAAAATTATTAAAGACAGTGTTGTAG GGTTTTCTGGGAAATTCTATTTGAATCTTTTTCCCCTTTCTTCTTTGGCT TTTTGTTTtggatctttttcttttcttttcgctCAGCAAATAGTCTTACA GATCGCATACGTATAGTCACAATAAACGATGCTCCGTATACTTTCGTTGA TGGCAAATTTTACGACGCCGATAATGATATGTGTTCCGACGGTTTCTTAT GTCAAATTCCGATACAAACGGATAGTTCCAGGCAACTTAATTACCAAAAG TCTTGTTGTATCGGTTTCATACCGGATATTTTCCGCATGGTCATAAAGAA CGTTGCTATACCGTTCGAAATGTACGTTGTTGCGGACGGGAAGTATGGCG GATTCAAGAACGGTACGTGGAATGGAATGATCGCGGATGTTGCTTACGGG AAAGCGGACATGGCGATGGCTGCCATCACCATCACGAAAGAACGGTCAGA TTCTGTATCTTTTAGCGCCCCATTCATGTTCGACCAAACGGGAATCATAA CAAAACCAGCAGTGGTTGAACTGGATTTTTTGAATTGGGAGTTTTTGGCG CCTCTTTCCAAAGAGCTTCAAATTTATCTAGTGATTTTGGTTGTGGTTTG TATGCTGTTGCTttacttctttgaaaatacaataTACTTTTACATTTATC ACCACCATGGGTTCAGTCATAAAGCGTATTACTCATTCCTCGAAGGACTT TCTCACATCTCTGGTGTAACTTTACAAAGAGATCTTGGCGGGAAACATCC TTTACGCCCAGCCGCCCGTATCATGTGTTTGTTTTTTGCTATTGGGATGG TAATAATTGTTTCGACTTACACAGCCGTTTTGGCAGCACAAAGTTTGAAG AGTAAAGAGAGAGAGCCTCTACAAGGAGGATCACAAGATGTTAGAGTGAG TATTTTATTCTAGTGAGATTTTGTCTGTTCTTTCCACTTTCAAGAAGTgg tgtaaaataatttttttactatGAGAGAAACCTTTGGTCAGCTTATTCAG CTTATCAGAGGtttcaaaaatgaatgaaattatGAAAGTGGTCAAATTTA CTGTATCATAAACTTATCGTTTGAACCGTCACCGTGAATTTGTTCACTTA GCTAAATATAAGCTTTAGATAGAGAAAattaatatttccatatttttcag TTCCGGAATCCAACCAACGAATTCCGATTCGGTATATTACGTGATAGCTC ATACGAATCTTTCTTCAAAAACGGGGAAACGGATTTACTAAAACGGATGA GTGTGTTCATGGAACCGTACAATTATGACACCCTTGCTGAGGGTATGGAT ATGGTGCGAAATGGGTGTGTATACTAAATATGAATAGCAAATTTCAACTA TATCTTTATAGTagtcgagttatggagtaagatttATAAGGTATGGTTAA CTGAAGGGAagagaaaatttgttcgagttagggagacattcgagttaaag aggtcGGCCTTAATTCAACCACAAAATCATGATGTGTAAGTATTTTACTG TATTTACGACTAAAGCATTATCATTTTGAATTAAAACGTTCATCAATATT TCTTTCAGTACTTTGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCATTT CTATTTATCAAAAGATCGTTCATGTCAACTCAAATTGGTCAAAGATAAAC TCTACTTCTTTGGCCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATCGA GAGCTGATTAATCAAGgcattttgaaatttaccaGTAAAGACATGATAGC AGAGTTACAGGCCAAATGGTTCGATAATATTTGCCAACCGAATTTTTTTG TGACAAGCAATACGCAACTTTCGATTAAATTTTTTGGTGGTTTGGTATTC ATACTAGCGATGACGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAACA TTTGTGGTGGAAATATTTTCATGAGAAAGTCTTGAAACtgatgaaaagga agattttaaaaAGTGAATTGAAAAGTCCGGTGACGTAAAAATTGTCGTGG AAGATTTTAAActggaaatttaatttctgaaagacaatagaccttttcat aaattacgaacatcacttgcctcgcattcaaacaattaccatggtgatta tgtctcttgatACATTATGATGTTTTAATGAataaaaagtagttttaata aaatccgctgggagttaatcgccatggcaataatttcaaaacgaggcaag tgatgttcgtaaagTAATTTTCGAAAATGTCTATTACCGGCATCGGAAAG AAGGATATGGAAAAGTTCTAATGGGTCCAATACCATAACAGAGATGATTG aaactaatgatgaaaaaaatattttattcttcAAGAAGAAGCCCGGTACC ATGTGCGTATGTGGAGACAAAAATTAGGGTGTCAAAATTGCGTACCCTAG CAGTGCAAAGAAAATTCTgtcaaatttgagtaaatttggatGGACAATCG ACCTCCCGGTGCAATTCCTTGAATATTTTTGTACAAATAGAATTGGTCAG ATGTCAAAAAATCCCCGCGCGTGTTCGATTTCGAGTTACCAAGACTCTAC TGTATCAAAACTTGTTGACTGGGTTATCGAGACTCTACTGTATCAAAACT TGTTGACTGGGTTATCGAGACTCTACTGTATCAAAACTTGTTGACTGAGT TATCGAGACTCTACTGTATCAAAACTTGTTGACTGGGTTATCGAGACTCT ACTGTATCAAAACTTGTTGACTGGGTTATCGAGACTCTACTGTATCAAAA CTTGTTGACTGAGTTATCGAGACTCTACTGTATCAAAACTTGTTGACTGG GTTATCGAGACTCTACTGTATCAAAACTTGTTGACTGGGTTATCGAGACT CTACTGTATCAAAATTTGTTGACTGGGTGAATGATGTAGATTCGACATGA ACACTGCTCTCTATATCAACTAGATTATGAAGACATTTTAGCTGATGAGG GTTTTGGTGACAAAAATGAGTCAGCTCAGTTCTTTTTCTCGTGATGACCG ATTAGAAAGTGTATTTGTATTTCAGTTCACTACAAcgcaaaatactaaga acaggacgaaaaatataaaaacagaaATGGTACAATAACATTGAAACAAC AAAAACTACATAACCTTCGATCCATTAAAAGTACTCATTTTTTACAAGCA AAATTATCATAAGGCTTAAGGCTCAGGCCTTAAAATCTATACGAGTCTTT AAGTCCCTTAGCCTCCAGAGCTATATGTATAAAAATGGTCAATTTTGATA AGACCTTGGCACTCATCCGTTGGATCgaaagttgttttttgaaataaagc tTTGAAGGACAAAAAAACGTTCAATAAATAATCTtaatcttatataaaaa ataattcaaattctaaAGAATATTCCAGTATCATAAAATTAACTCCCTAA CATAATacacgtttctttataagaacatccaacatttttgaagcctttgg acgttcttaactttttgagttttaagcctaaaaatgttctcaacatgttc ttattttcaccattttttgagcattttttgactatttttctaAGAGATCA GCTATTTTAATGTCGGCAAAGCctcagaatgttcttaacttgttcttaac atttcggccatcgaatatgttcttatattgtttgttcttataaagaaaaa cgtaTAGTTACATAGCTTCCTAAATATTTAGTATTTAGCTTTTAAGGTAT ACCTAGACACCTAGTTACTCTCTCAACTACCCAAATAAATAGGAAATGGA AAAATCGTTATTCCAAATACCACAAAAGGAAATATATAGACTtttcagaa aatattttcaaaaagattgaACGGGAGATTTTTATTGGGCAAAATGTGCA CTTTAGACAAATGTCAGCATCTTCCAATATAGAATACGTATGAcgtaatg ggctcttccaaagAAAAATCCACCATAAGGGGAGGATGATATATTTTCCT GAGAAATTTGACAAAGGGTAAATTAAAgtgtcc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013398TCONS_00013398Clytia hemisphaericatranscript
TCONS_00013399TCONS_00013399Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013398-proteinTCONS_00013398-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000167supercontigsc0000167:418518..426200 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.28 0.16 0.19 0.26 0.39 0.3 0.96 1.2 0.7 0.59 0.32 0.44 0.33 0.3 0.14 0.15 0.33 0.33 0.8 0.73 0.73 0.67 0.51 0.81 0.72 1.21 0.47 0.38 0.51 0.49