XLOC_006123 (gene) - C. hemisphaerica

Overview
NameXLOC_006123
Unique NameXLOC_006123
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000118:433743..443741+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006123 ID=XLOC_006123|Name=XLOC_006123|organism=Clytia hemisphaerica|type=gene|length=9999bp|location=Sequence derived from alignment at sc0000118:433743..443741+ (Clytia hemisphaerica)
ttcagaaattaacgcaaaaactaaaaaaacaaacagaataaTCATGGATT TCAAACTCCTTTGCATGGCATTACTTGTTAGAATGTTATTAATATTTTAT GGGACGCACCACGATCGGTATTTTGAAGTCAAATACACCGACATTGATTA CACAGTCTTCACAGAAGCAGCAAATCATACCTTGATGGGCGGTACACCCT ACCAAACACCCACCTACAAATACACGCCCTTATTGGCACTCATACTTCTC CCGAACATTAGTTTACACTTACTATTCGGTAAAATACTCTTTTGTATTGT TGATATCGTGGTTGCGATGGTGATGAGTGAAGTCATGAAACTTGGTTCCG TGAAAGGAGACTTTGCAACGAAAGTAGACGAAGTGATATGTTTTTGTTGG CTTTTTAACCCGTTCACAATTACCATTTCTTCGCGAGGAAACGCAGAAGC TATTCAAATTCTTTTGGTGGTCCTGACTCTGTATTTCATGATGAGTGATC ACACCTTACTCTCAGGTATTAATTAATTTTATCTGGCACCCAAATGGTGA AGTTTTCATCCGACAAGtaaaagctctgaaggtcgggaaaactttcaaca tctggaaggtttacattacggaattttgtaAGGCCGTGTCAAGGACTTTG CaacgggaggtctggtaaccaagccctcgttttcggggattggcggttCT AAGTGAAGTATTTTCTGGCTTACGCACAATGGTTGTTGAACCTGATATgc gatgcggcacatcaaaggccgactgtCATTCCTCTCCGATTGGAAATTTG CCCGCTCCTTTACAAccttagcgtgggcggccgtcaatccgccatcggaa tatcagatattAAGTATTAATTGGGATATTCAAGAAATAGTCTTAACCCC ACTGTGTTGAGGAGGTgagacgtccagggtggtcttaaaaataaaagtcc agggtggtctgttattttttcatgtaaAAATCTGGGATGGTCAATAAAAT GGggtcaaagaaaaaaatccaacagGGTCCTGAatgattgaaaaataaat ccagGGGTCACCTTtccctcctcaacatagggggcaCAAATTTTGTTATG GAATAACCCATTATGACGTGTCCTAAACTTGTTACATTGGCGTTGTTCAT ATGACGTCAGATATCTGAAGTCATTGTATTGATGCGCTCTTAGAGCCAGG TTGACAGTATTTGATTAAAGTGGATTAAATTTTACGTGAGTTAAACGGCC TAACTTTCACGAATTTTGCCCTTTTCGCTAAATTATTCAGTCTTCTTAGT CTGGAGGCGGCTTTTGTTGAGCCTTGCAAGTAGTATACATGggtttttat attattttcttaTCTTGACTCCAAGAACAGTTTTTGAAAAGCTTTAGAAA GTTTTCCATGAAGCATTGAATGAGGTAAAGGTCATTTTGGCCTAGAGTCC CTTAGTAAGTCAATTTTTGAAGTCCCCTATTGAACAAAACTCGTTGCTCC ATCTAATAGAGCTTAAAGAATAGTTCTCCAGGAAGGGGTCATCTGGGTTC ATTTATATAATTTGGTTTTCCCTAATAATGGacgaaactttttcaaaaaa ccatCAAACTCGCTCAaatatgctgaatcagcaaaatttgaaatgcaaat atctcaagatctaGCAATGGTACCTCAACAAACTATACCTGTATTCGATA atactcttcgagacgcatccgttgaaagtggttttgagtgctgaaattaa tttttaaagtgttgacgtcagcattaaaaatgactttttttcagCCATTA TGGCTATTTTTTCAGGGTCTGattgaccaaattttacaaatgaccccatt ttggacatCTACTCTTCCAGCTCTATCAGATGGAACCATCAAAattagct gtttaaaaacttttaaaattgaNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNTCACtgctttttgcttagaaaacc cCCTTTCACTCTTTGgtccataactttttttccccatgacaaaaaaattg actctacccctcatttgaaagctgataaaagtatctttccaacggtatat acccttttataataattttttctaggttgacccTAAATTCTACTGGACTA TTGGGGGACAggtatttttaaaggttggggggatgccaagaaggatAGAT CATTTAAGAAAGGGGTATCAGACCCCTTACCGCACTATCGAAAGTTCTCT TCCagatttttattgaatttattttctctTCTCTTCCAGGTTTCTTCTTT GGGTTATCTGTTCACTTCAAGATCTATCCTTTCATCTATGGCGCGCCATT CCTCTTTTATTTAACCAAAAAATCGTTAGACGAAACAAGACAACGGAACG TCACTATTTTACAATTCACAATCAAGATGGTAACTTCACTGCAAAATATC TTGTTTGGTTTGGTCTCCCTGGCAACTTTCTTTGGAATGGGAGCATTCAT GTTTTCATTGTTAGTTTGATTTTTACGACTGTTTAATTTGTTTTCCTTaa gtgtatatattttcgcgggtactaaattttcgcgaaatttactacggtat ttttcaaaaacacaaaatcgcgaaaataaatACGCTTTTCATAAATTCGT TTAACCCTTCTTAAAAAATATCCAACTTAGCGAATTGTGAAATTTAATAA ATGCGAAAAATTCCAAAGAGAAACGATCGCGAAATTTAGTACTCGCGAAA ACACGTTTCTCGGAAAAAAATTCGCGGTTTGCTAAAATTTAATAACcgca aaaatatatacacttataggcttggggacacgagaagtttttttcgcgtt ggtgcaatgcaacatgcatcatcccaccaacctgaaacgctttctcgtgt ctccaccccatttttcttttaataacatttgtgcttctctcacttttgtc ccagggacaaaatcagcgtgtcttttgggtatttccctcactttttgtcc catgaaacaaaaaaagaaaccatgagacgCGCACTTtctttcttgtgttg gtggtaTGGAGCATGTTGAATTGCatcaacgcgaaaaaaacttcttgtgt ccccaagcctttaaggTATTTCCTGTGAAGTTTTGGTTGTTCGTTAGCCG ttactactctcgggtacctaatagccggggggtttggaataagcaggggg gttggaataaaaatgtcctgggtggaaaatgttcgaaaaggaggctgata cagcagaattagggcaaaagagggaactNNNNNNNNNNNNNNNNccaaaa atcaataagcgggggggttggaataagaatgtcctgggtggaaaattttc gaaaatttaattAGCAggccccccggctattaggctAATAGTTCTCTTAA GATGGTGCGCTCCTTCACTTGCTTACATTAAATAAGGtgttattaattat taattttCGTAGTTTCTTCGAAAGATTCATTGTATTTGTGCTTATcacga ttttgtaattttcctcTTCAGATATGGTTTTGACTTTATCGAGAACACTT ATCTTTTCCATCTCTCGCGTATCGATATGCAACACAACTTCTCCCCGTAC TTCTACGTCCTAAAGACCACTCAAGGATTGTGGGtcggtgacgtcatcaa tcgCTTAGCCTTTATACCGCAGATGGGGACAGTGTTATGGATAGGGGCTA AATTTTATGACCGATTACCGCTGGCATTGTTCTTGCAGACTTTTGCATTT GTCACGTTTAATAAAGTTTGTACATCACAGGTATGCTAATACTAAATTTG TTGTTTGCCTAAAAGGgagaaaatttggcgggaatttaattttagCGGAT GGtcgaaaaagattttcagaGGTAATGGCGAGTGGCTAGAAAGATGAAAT TTGGCGTTTGGAGGCTATTTTTTAGTGTCGATTTaatttatcaaatcgct ttagGTGTACGAACCCGGGAGATGcaagatgacgggtatgtccgagccaa agtttgagactgaatttcgaaaattttgtcaattttttgactatttcctt gaaatttcagccaaaattttcaaatttagtccaaatttcaaccCTGTGAG agagttgaattttgattttcgtaattttggaacccttcagagactcaatt tgctttttaatggtttttgtaccctttTGAGGGACTtttgagggtgtgaa aaagggacccttaccATACCTGACACCCATTTTACCTAAGTACACCCTCC CCCGGTGTACAAACtttcagattttaatttttactcGAAAGTTAATATCT TTGAAGATTCTTAACAATACGACTGGTGAGAGTTTACGAAGACGATAGAT ATCAAAGTttaagtactctcgggtacttaatagccggggcgtttggaata agcggggggggggggttggaaaaaatctgctcactcgccaaaataagttc ccgccaaaattaaattttttgttccctTGCCTAAatacccctgaaattca tcaaatttgctcaaaataaggcaaaatggaacagatttacgctgtcattc gccaaaattagttcccaccaaaatttaaaaaaatcactattcgccaaaat aagtccccgccaaagttaaaatatttcaagattttcgccGCTCGCCAAAa ctagttcccgccaaaataagttcccttaaggtagtctaTTATTTATGTTT CTCAGTATttgcatggaggtataaagaaagacaggagaagtatgctattg taaccaagctcgccctacgattaaaaaagttacgatgtatgcatgctcat aatctcatatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggc gagcttagaatttcttttgatacattttataaaagaaatcaaaagacttt aacgaccaattaccgacacattcaactcctgttttctttatacctctatg gtatTTGCAACTTTCCAGCAGTTTTGTCATGTTTTGAATTCCCTTTGTTG TGATACCTCAAAAGAAGGAGAGGTTATTTTCCAAACGTTTTTAAAAGCAC ATGAATTTTCCACTTGGCTTTTCAACCAAATGACTTTAAACCATctttta acgttttttttttactcctCATTTCCACTACCTATGTTTTGTAAAgtgtc aatttcatttttcagtaTTTCATCTGGTACATTGGTCTTCTACCAATGGC TTATCCTTACCTGCACATTGTTGATCCAAAGAAGAACATCAAGCGAACTG CTCGTACGAATGTTGTGCAACTTGCAATATGGCTTATGCCACAGGTATTT AAGTGCTATTTAGCAATACAGATTTTTtgtaagcaactccaatttttggG TCAGGGTTGGGTTTTCTTAGCAGTCTAactaattttctgaaaaagtcgCT TTGACCACCTCTGATATTAtgccatatttatgcttattgggtcaagggct atcgtcTGCCAAAGATAGTGAAAAGcaataatgaaaatgaaaaagaagcg TGTACATGTTGTTGCTAAGGCTCCCTCAAATTAGCCATTTTTTGCACTAC CTCGTAATATAAAAGGTATCCCTTGGTCCAATAAGCATAATAGGGTATAA TATTAGGGGTGGTCAGAGCAATCTTTAAGAAAATAAGCTACAACATAATG CTAAGAAACCCCAGCATGGACCCGAAAATTGGATTTGCTTATGGTATATG GAAAAAATATCATCCACTTCTTGGCTCTATCTATATTTCAATTCTTTCTA AAAGAGTTCAAAGAAAAGTGTTATGAGCTCACCCCTTCCCCCCAgcagac cttcaattcacgcaaaccgctggggactttaggcgtacaaacttttgcga ttttcacgaattttgaccctttccgcgaaagtaaatgtctttaaaaattc taagaagggtcattcgcgaaagttGATGCTCACGAAAAATTCtcgacaaa atagaaaatctgtaaaacttcaaactttgaataagaTGTTACTTTTATGT CACTTTTAAgtctgctaaaagactaataagtgtttcaagccaatccaaga agtatttgtccctctaagccattttttcatgtgaaaattcttaTTTCGTG TcttaattcgcgaaagtttatgctcgcgaaaaatatttttccgtttaAAT tcacgaaagtaaatgtcgtgaatttcgcgatttttcgtcctcgcgaaagt ttctgctcgcgaaagtctgtacgcctaaagtatgaTGTGAATGATGTGAA AACATAGGTCCAGTCATAATtcacttgttcttataaaaaaagtataagag ctataccttatcggggaaaataatgtcggagttttatttagtcggggaaa aaattcgtgACCTAGaagcattttcgtcacttttccccatcgggtaaaat gataaaatatagGGGAAAAACTCGTCGGGCGAAAATTTCGtcaacccctc aaaattttcgtcactttttcccCTGATAAGgtattatcttttcaacaaaa aaaaagaagtgtgTACCACTAGGAGGGCCCCTGTTAGCGAAATTTCTGGA ATATTTACTTTTAATCGAAATCGTTTTTCCGTTGAaacaccctaaactcg atccaatccttttttaacacttttttctattgtctacaTGTGCGAAGAAA TGACTGGGcaggttttagggtggtaaaacggacaaaaaaatgtccgcgcg gcaattggtacgatggcccctaaggctcGCCAcacacttccagttcttat aaaatttgtgaactagaactgtctagggtcatggcccagaaggctcacga gacactgcgcacttccgaCTTTTTTTGTGAcgacactgcgcacttctaaa aatattttagagacgCAAAAGTCCCTCTCGAAAGATATCCGTAAtggtca gcaaaatagataccGAGTTTTAATAAATGGGTTGATGATAATATAACGAA GAGGATCGGAAATCCCGAGTTAAAgaaccgagttacgaaaaaaacGAGTT ATGACGTTATTTTCGGAAATAAatattgacgtcattttataTCTACCTCA TGAAGTCGTCATTCTAAatttcgtaactcggtttttggacctaccccggt ggggtggaggtcctataaattagcattttctcgagatttcatcattagtt ttttctgattttttgcacaaagatgcgtattaacaatgtctaaaacatgg cctagtccgatttttgagaaaaattctattcaggctgaaaatgccggaga tatcccggaaatcgccgtttttgcagattttcattggactttttccttat atttcgttgttttttcacacaaaaacattatttgtagcaatgcccaccat cNacatggtttaattgtcaataaaagtgatttttgaagccggaactttct aaaaatcgccggaacagcctattttcgccggaaaaacggtatNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNttttttggcattttctcgagttttc atcattagttttttctgattttttgcacaaagatgcgtattaacaatgtc taaaacatggcctagtccgatttttgataaaattctattccggctgaaaa tgccggaaaaatcccggaaatcgccgtttttgcagattttcatttgactt tttcctaatatttctttgtttcttcACAGAGAAAcgttattgataacaat gctcaccatcaagcatgattcaattgtcaataaaactgatttttgcaacc agaacttcctatttatttatttctacaacccttccctcccatcaacaatc aatgatgaattcattgcgttgtgtattttcgctaaatgctgtattttctg actgatttttttcatttttcttttcgcattgctatctaactttcatcatc aggtaggtccaatcagcATCTAGCTCGTTTAACTTAACTTCAATTTTCGT TCTTTTagattttcgagttattttggcGTTCCCAGCAGAAGGCTCGAAAA CACGCACTTCTAGTTTTCACAAAATTGATATTTggtcacttttttcttcc cCGATTTAAGCTCGAAAAATTCCCCGATTTTTGCCACTGAGGGGAAGTTT TGCTGACTAGCACTTAACTCGGAAATGAACAACTCGGAAGTATTAACTCG TTTTGCGCAACTCGACATTCATTTTAtagaccaaaaaaaatttcattgcg CGGGCCGCTCGCATGGAAATTTCCGGCCGTGACAAAAAGtaagaagtgcg cagtgtcacttgagccttctgagccattgaccctagacagtagttcacaa attttataagagctGGAAGTGCGTGAAAACTAGAAGTGCGTgatttgagc cttctgggccatcgtaaattggcggctacggtcgaaaaggtgcattgcag catctttaattttgattgttttctctTTCATCTATAGGCTGTTTGGTTAG GGTTGGCTTATTTGTACGAATTTCGAAAGTTGGATGTTTTAGTGTATGTC TGGCTGGCATCTCTTGTATTCCTGGGAGCGAATATATATTTGTTGAAAAG CATGATGGGAAGTTTTGCAATCATCAAGGGTGATGAAGAAATGGAGAAAG AAGATTGAAATACTTTTATTCATACTTATATACTTGTACAGAGATTTGAA GGGTCAGTAACATAAATATGGACGAAAATGGTTAAACTTTTATACTGTTA TACTTTTAAGTGGATTCGGCAAAAAATGCCAAATCAATGATACGTCAAAT TTAACAAAGTCTTTTTAAGATAGAATTTTATggatttaatgtttttttgt gtAAGAAATACCACGTATCTATTTAGTTTATCAGAGGTCTACAATcctgg ccataatatttgagacaaaagggaaattcccacgaaatcttataaccaca agtattttggaaagcgctctaaattaggttaaacgaatagagttttaact ctgagttaggaccttagaatctgaggatccaaaagtcccagaatggtcca acagggctcagaatatagcctggtagtcaattaaccccacccaaatcaaa atactcgaataaatttatcaattagcccaaaaacgactttctcgcccgaa ttccaaattttgaaaaacgaggaaataagctaaattctcaatatattttg gccagGATTGTACACTGTTCTTACTGTATCTgctaaattttagaaaatcg aGCATACGTTAAAACTCTCACTTTAGCCAACTGTCGCTAAATGAAATTCA TGCTAAAGGTAACCAAAGTTTTTCGATCGCAAAAGATGTTAAAAGACTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010898TCONS_00010898Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010898-proteinTCONS_00010898-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000118supercontigsc0000118:433743..443741 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PIGMGPI mannosyltransferase 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.5 30.49 13.37 11.17 9.83 7.34 7.45 8.94 5.93 7.05 7.41 5.15 6.27 6.1 6.84 8.29 6.66 8.04 4.91 4.38 6.61 6.3 23.57 19.97 6.95 6.07 3.07 3.54 15.39 18