TCONS_00010898-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00010898-protein
Unique Name	TCONS_00010898-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	430

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00010898-protein ID=TCONS_00010898-protein|Name=TCONS_00010898-protein|organism=Clytia hemisphaerica|type=polypeptide|length=430bp
SEINAKTKKTNRIIMDFKLLCMALLVRMLLIFYGTHHDRYFEVKYTDIDY
TVFTEAANHTLMGGTPYQTPTYKYTPLLALILLPNISLHLLFGKILFCIV
DIVVAMVMSEVMKLGSVKGDFATKVDEVICFCWLFNPFTITISSRGNAEA
IQILLVVLTLYFMMSDHTLLSGFFFGLSVHFKIYPFIYGAPFLFYLTKKS
LDETRQRNVTILQFTIKMVTSLQNILFGLVSLATFFGMGAFMFSLYGFDF
IENTYLFHLSRIDMQHNFSPYFYVLKTTQGLWVGDVINRLAFIPQMGTVL
WIGAKFYDRLPLALFLQTFAFVTFNKVCTSQYFIWYIGLLPMAYPYLHIV
DPKKNIKRTARTNVVQLAIWLMPQAVWLGLAYLYEFRKLDVLVYVWLASL
VFLGANIYLLKSMMGSFAIIKGDEEMEKED

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006123	XLOC_006123	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00010898	TCONS_00010898	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007704	Mannosyltransferase_DXD

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0016758	transferase activity, transferring hexosyl groups

Vocabulary: **Biological Process**
Term	Definition
GO:0006506	GPI anchor biosynthetic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006506	GPI anchor biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007704	Mannosyltransferase, DXD	PFAM	PF05007	Mannosyl_trans	coord: 142..414 e-value: 4.8E-67 score: 226.5

Blast

[Close]

BLAST of TCONS_00010898-protein vs. Swiss-Prot (Human)
Match: PIGM (GPI mannosyltransferase 1 OS=Homo sapiens GN=PIGM PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 3.907e-81
Identity = 154/402 (38.31%), Postives = 223/402 (55.47%), Query Frame = 0

Query:   22 MALLVRMLLIFYGTHHDRYFEVKYTDIDYTVFTEAANHTLMGGTPYQTPTYKYTPLLALILLPNISLHLLFGKILFCIVDIVVAMVMSEVMKLGSVKGDFATKVDEVICFCWLFNPFTITISSRGNAEAIQILLVVLTLYFMMSDHTLLSGFFFGLSVHFKIYPFIYGAPFLFYL-----TKKSLDETRQRNVTILQFTIKMVTSLQNILFGLVSLATFFGMGAFMFSLYGFDFIENTYLFHLSRIDMQHNFSPYFYVLK-TTQGLWVGDVINRLAFIPQMGTVLWIGAKFYDRLPLALFLQTFAFVTFNKVCTSQYFIWYIGLLPMAYPYLHIVDPKKNIKRTARTNVVQLAIWLMPQAVWLGLAYLYEFRKLDVLVYVWLASLVFLGANIYLLKSMMGSF 417
            +A L R+ L+FYG   DR   V+YTDIDY VFT+AA     G +PY   TY+YTPLL  +L PNI L  LFGK LF   D++ A ++  ++ L  +    A       C  WL NP  + +SSRGNA++I   LV++ LY +       +  F+G +VH KIYP  Y  P   +L       KSL + R      L   +K + +   +LF  V+  TFF +    +  YG++F+E+TY +HL+R D++HNFSPYFY+L  T +  W    +   AF+PQ+  +  +   +Y  L    FL T  FVTFNKVCTSQYF+WY+ LLP+  P          ++   +  VV L +W + QA+WL  AY+ EF+  +  +++WLA L FL  N  +L  ++  +
Sbjct:   24 VAFLARVALVFYGVFQDRTLHVRYTDIDYQVFTDAARFVTEGRSPYLRATYRYTPLLGWLLTPNIYLSELFGKFLFISCDLLTAFLLYRLLLLKGLGRRQACGY----CVFWLLNPLPMAVSSRGNADSIVASLVLMVLYLIKKRLVACAAVFYGFAVHMKIYPVTYILPITLHLLPDRDNDKSLRQFRYTFQACLYELLKRLCNRAVLLFVAVAGLTFFALSFGFYYEYGWEFLEHTYFYHLTRRDIRHNFSPYFYMLYLTAESKWSFS-LGIAAFLPQLILLSAVSFAYYRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPL---------VRMPWKRAVVLLMLWFIGQAMWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQIISHY 411

The following BLAST results are available for this feature:

BLAST of TCONS_00010898-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00010898-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PIGM	3.907e-81	38.31	GPI mannosyltransferase 1 OS=Homo sapiens GN=PIGM ...	[more]

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TCONS_00010898-protein (polypeptide) - C. hemisphaerica