MSTRG.14205.1.p1 (mRNA) -

Overview
NameMSTRG.14205.1.p1
Unique NameMSTRG.14205.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000117_pilon:614873..622609+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14205.1.p1 ID=MSTRG.14205.1.p1|Name=MSTRG.14205.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7737bp|location=Sequence derived from alignment at sc0000117_pilon:614873..622609+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTAATGGTTGGCAGGTTTTTCATATGTCTAAAAGTAAGTATTATTTTTG
TATACGAAAGAGGTGAATAATTGTGTTTGCCCTTCCTATTTTTGAGCCAC
AAAAGTGTGTGGGTGGCATTGAACTCGAACTCCTCTAAGATATTTAAAAA
AATTGTGAGTGTTCAATACACCTTTCCCGTAATTATTCAAACTTCTGCTA
CGACCCTGCCGATTCCCCGGACAATCCGGGGATTTCTTGTAAATGTCCGG
GAATTTTaacatttattttgaaacttagtGCCCTGGACGCCCCGGACTTG
GTGCGTTGTTTGCGCTACGCACAACGCACGTAATGTAAAGATAGTGAAAT
ATGCCTTACTGGCACTGTGATGTGCCGTACTGGCTATGTGGCGTGCCGTA
CTGGCTATGTTGCGTGCCGTACTGGCCGCGCGACGTACTCTAACGGCCGC
GCGGCGTGgggttattttaaaaagcatggtACCCCCAATTGGTGCACCAA
TTGGGGTACTCATTGGGGTACCCATTTAATTTACTGACCAGAATTAAATC
GTgtgaaaaagaataacatacgcttttaaaaataaatgtagagtgatata
attaatacatgtaataataacatgtaatacaaaataatataatatgtGTT
TATGCTCGTTTGCTTTAAAACACGTGAGAATCAAAGACTACTTCctactg
tcaattcatatccaaTTATATTTCCTACATCAtaccagtatggattccac
gaaatcttgcgccaaagatatttttccgtacagcaagcctcacgccaagc
aaaattttttttgtaccaacattcaatttttcaataagggtgcaagatgg
gaaaagaggcgcatgcgccaacataattaataaattgacgcgagcgtaag
cgagcgaaagcaaatttagccaaatgaaagctaaaaatcgatggattatg
cagtcattcacgccgagctggaattattactttacgccaactgaaaatca
aacaatctttgttgtaagtacccttacgccaatgtgccaaaaacgtttca
gttgtacgccgaagatcttcggcgttagttacacgaaatccatactggaC
ATCATATAAATGTAATTCTTATTCAAGGCAACCTTAGAACTATTGTAttt
tatgatgtcatcaaaatttttggtaGAAAGTGTCAATTTagtgataaaaa
tgacaaaagaaaatgtcactGCTTTTCTTTCTCTAAAAGCATCTCTACAG
ATTTTCCAAGGCTAAAATGACTGTCAATTTGTATCTTTTTGTACAATGAG
CATCACTTTcagtataataaatctttttggAGGAATTTGACTTACGATTa
tcatatttcaatattttttaaatatttttgcaagAAAGTGTCATTTTTTG
TCAGCATTCTGACATGTAAAAAGAAGAGATATTAATAAGATGTTACTAGC
CAGCACCTTACAATTTTCCTGATTTTAAGCTATAATATGATGTTGGTTAC
TGGATTGGAATACTGTTTGGTTTGGTTACTGAATTTATTCTGGTCTTact
tattctggtctgtaaatttttgaagaaagaaaggaaaaaagcaAGATGGC
GGCTGATTTAATTAAAAAGCAGTAGATTTTCACTTCGTGTCGGAAAACGG
CAATTGTGACAAAAGTTTTGTGACAATCTTAAATCTAACTTTCTTAAATC
ATCAATGAAAGATTGTAGCACTATATTATAATGAAATTAAGTGTCATTTA
ACAAAATTAAGGACAGAAAGTGGTACCCCAACAAGTACCCCAATTGGTGC
ACCAATTGGGGTaccatgctttttaaaataacccCGCGGCGTGTATACCT
GATCGTGCGGTACATTTAGATGGTCGCGCGGCGTGCCTCTACGGACGCGC
GTGGTGGTGCACAAGTTACATGTCCGGGgaaatatagttttttttcGATC
CCCAGACATTTACCCCGGATTGTCCggggaatcggcagggtcgtcTTCTg
atcagaaatggcccgggaaaatgtgcgctccaccgttgtgggTTTttagc
ttctaacttttgatagcctAATTTTGGGGGCTAATGGCTTTTGGAGCCTT
GGATGACGAGCagtcatatttaaaaaaaatcctttctgattggatgaaag
gACTTTACCTTCAtctaatatgattttttttaaacaattgctatcaattt
tttgattggacaaaataaaacaaatgatatcGCCATGATTGGATAACAAA
ATATCTGACACCTTCAAGAAAGCCTAGTAGGCGTAAAGCTAAAGGCCCAG
CCAGTGGTGGTAGTGTCGACATATTTTTCTGTTGCAGAGTCGCacggggg
cactcatatggtccaaccccttaagggtaggtttttcgagacccttgaaa
tgcactgtaaggctGTACTTTTGGtagagtgcactacaagggtcttcttt
taggtGGATACAATATATATAAAGGTGTTTTTAGGGACTGCTAAATTGCA
AGTCTGACAGTATAAATATAcgatgtatctttatagttttgactcgcact
cattttgatctgttttgcaTATTGCGTCGACATCTCAGTTTCATTTTTGg
gcgatttttgaaaaataagatatGCAATCAAACTAGGTGAGGGttttcac
tgctcaagagcTGTACTGTAAGCTCAAATAGTTTCCAAACAGCCTTAAAG
ATCGAAGCTAGTAAGGAAGGTCACAAAATAGCATACagtacatatttttt
ataagaaccagtagcGGTGTTGCTCGCATCCctcagatccttggttagaa
aaagctatacctgtttacttttttcttgccagattcaacaagccatcaac
caacaaaattaatactgacatcaaaaaattcacacgacctttccactaga
cacttctaaattatctgccattatgaagatgttccgaaatcaaccaatcg
ggtttacaatcggaattcctctgggagttagcgagtcgggaaatgtaaag
ttacGTAATAGGTAATACATAATTTTCTGGGGGTTAAAcgtataaataaa
attgaaatggtttgtttttttcttcattatatatttaagtttccattatc
aaaattctagaaatgctaGTTTATGGACCATATTAGAAAATTgttatata
tttcgcaaaataaacacttacaaaagctattacttactatttttaccccc
gctttttaaacagcgtcttctgtgggcgtgatatcaggcggagacaaaac
gccatcatcgtaagattctcgggtcgtcttattgtttgttccttttgtcg
agtctgtcggtcctattgttcatgctaaatccatacacgatgacgtcaat
gtttggcggcatacctgaaaataaaaacaaaaatattatcatattatttt
tgcatgaattacgctaccttatacgtcattatagaattatacaaaacgaa
agCGAGTCTAGACCGCCCGCCTAGAGTGCAggccctaatattttttctct
cgcggtcttcaggggaaaacgaaagtgatcgatatattcttcgaaggaag
aatttgccaaacaaacccctagacaaaaagatgtattttgaggttgggaa
tggatcctgcgaagatgaaaaaattttgactaggcgtttttttggcaaag
ccaaaaactctaatttttttcttccctcaagctaaaaaggttacgggttt
tgggcaatcgaggcaaaaatcagcaaaaagctggtgttttccgtaaatct
gagaattgcgataagatcctcactgAGTAGATTTATGGCAaggcttggct
gttcttattttttggcactttgagcctggaATGGTTCTTATCCTGGTATT
ATAATAGGGTGAAATGtaggtattttaggctttacACCTAATCTTTACTA
CtatgacccctaaattgcttgaaattgagtattCCAACATTTAATATTGA
ATGAATTTCTCTAAAATTGATATTTCTGGTGAAAACCGGTCAAAATGGTA
ACCAGATTTTCCAAAAGATCTAGGGTATgtgcagtagcgtggtgggttgA
CCAAAATTggggcaaactggggaggcaatatgtgacttcccaagcgattt
aaagtacctgaaaatcagacCGGTCTTGGTCCGGTATTACGAGCGGTCTA
GTAgcggtcaaatttttgtttttagatcgGCCTCCAGACTTTCTAGAAAT
GTAATCTCTAACGGTCGTGGCCGCTTCTAGACGTTCGTGGTCGATCGTTG
GACCGGTCCGGGCCGTTCGCTAGACCGGTCCGGGCCGCTAGTTAGTGATT
TTTAGTAACAATTACATCAGAAAAATGTTGTAAAAGGATGTCAACCGAGC
GATCGGGGCCGGTCCCCTAAACTCGTAGCGGCCTTTTGGTAAAATTTTAC
CGGTCATTTACCGGCCCTCAAAAGACCGTCTAAAGACCGGTcccattttc
aggtactttaaatcgcttggggagtcacatatttgcaaaagttttgattt
tgggGTCCCCTATGAAAGTAGTACCAGGCTAGAAATAGTGCACAGTACGC
CAAATATATTCGGAGTGAGGCAGTGATTACTTTTGGCGTATTGGCGTAAG
GAACAGATATAAAGTAAAATATTGGCGtaagtcaaagcttttcaagacga
GATGCCATCCTAACGCCTGATTTCTTTATGCCAGGATTATTAAGCTTTGC
CTCTCCCTTGACGGCCATATAACAACGTAGAGTGTAAATAGAATAAAAAG
CTTATTTGGAGCAATTTTTAAGCatgagaaaatcaaatatcCCAGGGTTT
TCGGTTTTCGGCGTAGATAtcaattaaaaataataataattcggCGTGGA
CTTAGCATCGTTTCCACACTGGACTAGCATAGAAATTGATACGCTGTCAG
GTTATCCTGACGCTAAGAATATGCAATGTTTCTGAAGTTATTATGTTATT
AATTTTGGAGTCAAAATGGTCTGTTGCATCCTTTAgtatatcattttgaa
aaacataattATTTGCTTCTGATcacatactttaggcgtacaaactttcg
cgagcagaaactttcgcgattttcgagaattttggcccttttagcgaaaa
taaatatctttaaaaattctaggaagggccattcgcgaaagtttatgctt
gtgaaaaatccttgacaaaatagaaaatctgtaaaacttcaagctttgaa
taaaatgaaacttttatggcactttttagcctgctaaaagactaataagt
caaaggacaaatgtttcaagccaatccaagaagtatttgtccctctaagc
catttttcatgtgaaaattctcaattttacgtcttgatttgcgaaagttt
atgctctcgaaaaatatttttccgttaaattcgcgaaagtaaatgtcgtg
aatttcacgatttttcgtcctcgcgaaagtttctgctcccgaaagtttgt
acacctaaagtatAAAGTCTCTTTAACTGGAACCTCTATGACACGGTTGT
CTCCTTtactcaaacaagttttatagTTCCTTCAGTTCACAATgacttat
aaaccttacttcgtaactcgaaatttccctAATTccaacaaatttgtgtt
ccttcagtgtttgagttatggagactcaactgtactAACAATGAATGTTG
TGCTTTTCAGGTTAAAAtgtgaaatgaaatgaaagggAAAATAAAGACGT
AATGTTCTTGTTATATGTGCAAGCTGTTTCAACCTTTGCATGCTTTATTA
TTGGCTTTTTGATCTCCATTCCAATTGGATCGAACCGGTCTAAACATGAC
GGCCAGTGTTTACTATACGCCAATCTTGAAATTCATGGCCCTCCAGAGGA
TGGTTTGATTAGCAAGAACTTGCTGCCCGGCTCAAGACTTACTTGtgatt
tttgcatattttctgGAACTGTATCTTTGATTATTGGATTGGTGTTGTTG
ATAGCTACTATTTATACTATTCTACAAAATGGATTCAAACGATTCAACTT
GACTAGATATATTGGTGATCGcgagaaaaggaaaaataagtAAGTTGTCA
TTTTTCACACTGATTCAATTGAGTGGACACATCTAAAATTTGCAATTAAA
CTTATTCAATTTTGTTCATTTGAACCGTTGTTTATTACATTAGTCGCATA
TTTCCAAGTCAGCTAACAAAATCCTGCGAAAACTAACATTCTAAGATTCT
TTCTATTTCAGTAAGCCGTTGATAGGAGCTTGGATAAATTTTTGTAGTGC
AGCTGTCATGGCATTGTTGACGTTCGTCACAGCTTGTCTCATATCATCTG
GCTTTCACGAGTTCTGTGAGCAAGGTCTGAAGAATATACACAAAGCTGAT
CTCGGAAGGTTTGTCTTCTTCCCAGtccaatctttctttaatttcaatat
ttgcattttttgaagaaattattaTAATTTTCCTCGTATACTTTGAGTGT
GTGAGGCTGATTCAAAAGTTTTACGTAAGTATCCCCTCTTTTCATTGTTG
AAGAGCTTGCATAAAGAAACCATTTTTGGAGTTACTgattttaaacattt
ataaTTTTGTTCATTCCGATTCATTTCACAGCTGTGACCTGCTTGAAAGT
TATGTCGGTCCATTTTATAAACAGTTGACAATAGCTCAGGTAAGCTCATC
CTCCTACCAAATCCATACTTTTAACCCTccaaaaaaaaggattggaaagG
TCGATGAGGAAGGgggatgttcttaaaaagcACCAATCCAAGCACCTGAA
ACAGTTTCTATTCTCGTCTTTATCAATATTGAATTTAGCTATACGGATAT
CTAAGTCTCTCAGGGTTATTCGTACATATTCTTCCGTGCTAATGTGTATA
GTTCTATATGCTATATTATAACAGAAGAGACTCAGAACCACTTTTTCTAA
CTACAACCcgtcttttgtcattttttaataGGTCAGCGCGTGGTTGGGAG
CGCTGTTTTGGATCATTTTAACGGTGACAGGTCGAATGAATGTCCGAAAT
ATGCGTCCGAAACGAACCCGGTTAATGGCGGATGACGGTGAAGACTATCA
GCAGATCGAAAGTCCCACCCATTTGTGACGTAATATTGATTACACTGATG
ACGTAATCAAATTAACATAGTAACGTTCCTTCTTCAACTACTGGGTGAGC
TAAATCGAATGTTTGTAAGTAATAAAACATTCAGTGCTGATTGCTGCAta
acggaaatttttttttgaagttgcaAAAGGTCGAACaaattattatacat
ttttttgctgaagaGACAAGATTTAGCTTGTGTGACTacggttttatttt
tttgggtgTTCACATTTTTCCTTTCGATGATTAGGGGTTAGTTTTATTTC
AGACCTTTTTACGTCGATGattaaaaactgttttcctGCTATCATACAAG
GCTGTAGAACTTTGACAGGTATCAAACAAACTCCGAACTTTTCAGGGAAT
ATTGACTATCTTTTCATAAGAACTGGAtttttttAGGAGTGTTAAATGAA
ACATCTCAGGCTAGGTAGAAGTATAGAAAGtagaatttatatttttaaac
ttttaaggATTAAACAAATATAAgatattttatgatttatgaaaATTAGG
ATTATGTTCAGTTTATTATGAAATCGATTTTGGAGAACTTtttgtcttta
tgctgacacTGTACATATCTGTAAgtatttttaagaaagaaactttttct
tacgGAGATTTATTTATTAAGATCTACACAAGAGTTT

Coding sequence (CDS) from alignment at sc0000117_pilon:614873..622609+

>MSTRG.14205.1.p1 ID=MSTRG.14205.1.p1|Name=MSTRG.14205.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1575bp|location=Sequence derived from alignment at sc0000117_pilon:614873..622609+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCTTGTTATATGTGCAAGCTGTTTCAACCTTTGCATGCTTTATTAT
TGGCTTTTTGATCTCCATTCCAATTGGATCGAACCGGTCTAAACATGACG
GCCAGTGTTTACTATACGCCAATCTTGAAATTCATGGCCCTCCAGAGGAT
GGTTTGATTAGCAAGAACTTGCTGCCCGGCTCAAGACTTACTTGtgattt
ttgcatattttctgGAACTGTATCTTTGATTATTGGATTGGTGTTGTTGA
TAGCTACTATTTATACTATTCTACAAAATGGATTCAAACGATTCAACTTG
ACTAGATATATTGGTGATCGcgagaaaaggaaaaataaTAAGCCGTTGAT
AGGAGCTTGGATAAATTTTTGTAGTGCAGCTGTCATGGCATTGTTGACGT
TCGTCACAGCTTGTCTCATATCATCTGGCTTTCACGAGTTCTGTGAGCAA
GGTCTGAAGAATATACACAAAGCTGATCTCGGAAGGTCAGCGCGTGGTTG
GGAGCGCTGTTTTGGATCATTTTAAATGTTCTTGTTATATGTGCAAGCTG
TTTCAACCTTTGCATGCTTTATTATTGGCTTTTTGATCTCCATTCCAATT
GGATCGAACCGGTCTAAACATGACGGCCAGTGTTTACTATACGCCAATCT
TGAAATTCATGGCCCTCCAGAGGATGGTTTGATTAGCAAGAACTTGCTGC
CCGGCTCAAGACTTACTTGtgatttttgcatattttctgGAACTGTATCT
TTGATTATTGGATTGGTGTTGTTGATAGCTACTATTTATACTATTCTACA
AAATGGATTCAAACGATTCAACTTGACTAGATATATTGGTGATCGcgaga
aaaggaaaaataaTAAGCCGTTGATAGGAGCTTGGATAAATTTTTGTAGT
GCAGCTGTCATGGCATTGTTGACGTTCGTCACAGCTTGTCTCATATCATC
TGGCTTTCACGAGTTCTGTGAGCAAGGTCTGAAGAATATACACAAAGCTG
ATCTCGGAAGGTCAGCGCGTGGTTGGGAGCGCTGTTTTGGATCATTTTAA
ATGTTCTTGTTATATGTGCAAGCTGTTTCAACCTTTGCATGCTTTATTAT
TGGCTTTTTGATCTCCATTCCAATTGGATCGAACCGGTCTAAACATGACG
GCCAGTGTTTACTATACGCCAATCTTGAAATTCATGGCCCTCCAGAGGAT
GGTTTGATTAGCAAGAACTTGCTGCCCGGCTCAAGACTTACTTGtgattt
ttgcatattttctgGAACTGTATCTTTGATTATTGGATTGGTGTTGTTGA
TAGCTACTATTTATACTATTCTACAAAATGGATTCAAACGATTCAACTTG
ACTAGATATATTGGTGATCGcgagaaaaggaaaaataaTAAGCCGTTGAT
AGGAGCTTGGATAAATTTTTGTAGTGCAGCTGTCATGGCATTGTTGACGT
TCGTCACAGCTTGTCTCATATCATCTGGCTTTCACGAGTTCTGTGAGCAA
GGTCTGAAGAATATACACAAAGCTGATCTCGGAAGGTCAGCGCGTGGTTG
GGAGCGCTGTTTTGGATCATTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14205MSTRG.14205Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14205.1.p1MSTRG.14205.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14205.1.p1.exon1MSTRG.14205.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14205.1.p1.exon2MSTRG.14205.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14205.1.p1.exon3MSTRG.14205.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14205.1.p1.exon4MSTRG.14205.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000117_pilongenomesc0000117_pilon:614873..622609 +