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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000123_pilon:737665..742988- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14649.9.p1 ID=MSTRG.14649.9.p1|Name=MSTRG.14649.9.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5324bp|location=Sequence derived from alignment at sc0000123_pilon:737665..742988- (Clytia hemisphaerica_ch_hm2_pilon)
CAGTAAGTTAGAAAACATAGAAAATAACTCACAAAGAAACAGAAAGTCAG
AAAAACTACGAACAAGAGACTGGAAAGTACGAAATAAGTCCAGATCTGTC
TTTCGTCTTTGTGAAGAAGCCACGACCGTAAGGTCTGGTGGAAAGTGACG
AGTGTCAAGACCCTATTCTCTTTTTATGAAGGACTTTTGGTATAAAAACA
TATAAAAATGAGTAATCGTAATAGAAATAACCTTCCTAACAATCTTGCAC
AACTACAGAATCTCATCAAAAGAGATCCAGAGTCATACAATACAGGGAAG
AATTTCTACAACAATGGAAACATTTTCAATCCAATTTGGAAATTTTCAAA
CTGGATCCAACCAGGGAGGCTGAAGCTGTAGAAGATGTCATGAAATTCAT
TGCCCAGGTATAAATTGTAATCAGTTTGAGGCTGAGAATTTTTTTTTAGA
AATATTAATTTTATCATGATGACAAAATGTTATAAAATCCAGACCCGATC
AATCAAACAACCAGACGGTGTCAATCGAACAACTTCGAACAAAAATCGCA
ATCGAACTAATCGAACGTAATCGAACGCGATCGAATAATTGCGATTCGAT
CGTCAAACGTAATCGAATCTCAATCGAACGGTCGATTCCTGGGTAATATT
CGATTGCGTTCGAGTAAGGTTAGATTGGTTCGATTGATTGTTGACCATGT
TCGATTGGTTCGATTGATTGTCAGTTACATTGGATTAATCTTCGATATCG
TTCGATTACGATTATGTACGATGAGTTTGATTGCGATCAAATTAAATTTG
TTCACTCTGTTAGAGCTTCTTAGCGTGCGCGGCGGAGCGCTTAAGTACCA
TACTAAGGCGAATAAAATCTAATACAATTGAATCAATCGAACGTAATCGA
ATACAATCGAACGTAATCGAAGCAATCGAACAGCAAATCCTGGGTAATAT
TCGATTGCGATTCGATTGCGTTCGACAATCGAATTTCAATCGGTCGATTG
CGTTCGATTTGGTTCGACTGGTTCGATCGTCGATTCCGTTCGATTGAGAT
CGTCTGGAAACAAGTCGAACTAACTCTTTTTAACTTATTTATTTTATTTT
ATCCTTTATGTTTAAAATCACGAAAATGTACTTATGTATTATGTGATAGT
TCAATAGAACTAGAACTATTAAACTAATCAAACTCCATTGAACAATTAAC
GTAACTTGGTATAATGTCGACACACCTCCTCTAATTCCGACACCGTCAGT
CAGGCACATCCTGGCAAATAACAGGGTGAGCATTTGCATGGGGTATTCGT
CACCCAGTGTAAATGAGATAGGACGTCTCAGGCTAAAAGCGTGAAAATGA
ATAAAAATGAACTTCAAACTGAAAAAGGGAAAAAAGGGCAATTTTACAAT
CTATGGTGGACTGAAAAACACTTCGAAAAATACTTCACTAATACACGTAT
TCAAGTAATGTTACATTTGTCACAAATGATGACATGTGGCTTTCCCTATC
TACTTCGTGCTATACAAAGCGTAACAAGCGACGACTTACACAATTCATAC
TACAATTCCATGACTATTTCAAACATAACCTCACTTTATTATGGTAATTG
CAGTAATTTCGGTAATCACGGTAATCACACCCTTACGCCACAACATATCG
CCCTTTATAACGCCACACCATAATAAGACAATGTATACAATGTACCCCTC
AGGCAATGGTAATTGCAGTAATTTCGGTAATCACGGTAATCACGCCCTTA
CGCCACAACATATCGCCCTTTATAGCGCCACACCATAATAAGACAATGTA
TACAATATACCCTCAGGTAATGGTAATTGCAGTAATTTCGGTAATCACGG
TAATTACACCCTTACAGTTAGTCACACTAGCTTCCCACCAAATTGCGTTT
CAAAGATTAATGCTGCGAAGTCGCTTTATCATTTACTTGACTCACGAGCA
AAAGAATGCGCCGCAAAACTTCTAAAGGGATTTACGAAAAAATAAACCGG
CGCTTTTTAATGAAATTTACATAGAGGAAATCCTTGACAAATTCCCTAAA
TTTTGAGCCAAAGATGAAAGATTTAGGGCCAAGCCAACCTCAAAAACTAA
TTTTAAGAAGAACTTCACAAGAAAAAGATCTACGGGTGAGTGACAAGCAA
CTAGATCCGCAAAGCTGTGACATTTATCTTTAATTAAGAAAGTTAATAGG
AGTAACGTCTTTTTAACAATGCTATTGTTTGTTATCTCCCTCCTTGGAAC
ATTTTTCTAAGTCTCATGGGAAACATTTCGGCCGTAATGAACTAAGAACT
AACTGATAATGTATATGAGAAAAATAGATAAATACGATGGTCGTAGTAAT
TTTGAAAGTAAAGTAGTGAATAGTGTTGTTAACAAGTAAGCGTCATGAGT
GGTAAAGGAAAGAAAAAACGAGGTAATGTGCCAAATTTGTAACGTTGGAA
TTATATTTTCCAGATATTTGTGGTAAATTTCATTTAGTCGAGCCAACACT
GTTATCTTTCATCTTAATTTGTCCTCCAACGTCTATTATGAGATCTGTTG
CAGGTCAAAATTTGCGATTATTTAATAGGGGGGTTGTTTGTACTTTTAGG
GTGTGACGGCCTAGGCCCTTTTTTAGTACGATATTACGGGATTTGACGGA
AAAAAAGACAGGAAGAAAACAGTTTTTTAAAATCAGATGGTGACGGTATT
TAGCCTTATCTTTTGACAGTGTTCCGGTATTTTAACCTCAACAACCGGTG
TGTTTTTTTATTATTTTTTTTTATTCATGGGCGGATTCTGGAATTCCGTG
AAAACGGTATAAAGGCTAATAAGGCTACATATTAGAAATATGTACGATTC
TTTTTATAGCTCTACTTGATATAATATGTTGACCATATATTGACCATGTG
TATTCATAAATACTATTTGCAACCGTATGTTGACAATCAGGTCCTCGTTT
GTATTTATCAAAATTAGAATATTTTCTCAATCCTGCCCTCCCGTTTATGG
CGTGATTATGTATCTAGTTGAAATTCATACCTACTTAATGTATTTCAGGG
GTTGCCAAAAAGGCGAAAGAATTAGACACAAACAGGTTTGATAACCGATT
GGAGACATTTCACCGAAAGGTTTGTGTTTGCGAAGCGGTATTTTTATAAC
TTCATACGTTTTCTTTTGGGTAAAAATTAAAAAAAGACTATTAAAACTAC
AAATCCATATAATACATATTCTATTTACAGTGAATCATTTTCTCGGTCTA
CATTCACAACACCTACTGCTGCTGAGTTAGAAACTTCTATATCAATTTGG
CGGTTGGTGAATGCCTAAAAGTTCTTCCAACGTGGCTATTAACTCTGGCT
TTTTCAGGGTGTTTTTTATTTCTTCATATTTAGCCGTTTTCAAAGGATTG
TTTAGGTTCGTTAGACATTGCTCGATGCTTTGTTTCAGCTCCCTGAAATG
AAAACGTAAATAAAAGAAAAAACTAAACGTATACGGTTGGGAAGCTATGA
TCAACGATACCAATTATAAATTCAACATAATGAAATCCTGGGCGTGGGTC
GTTTTAGAGGCATTTGGTTGATTACAGGTTCTTTATTTGAACATTCGGCA
CTTACGTAATTGTTAAGTTTTTAAGTGACTCTCCTTCTTCTTTTTCCTTG
CTGGTGACATAAACATATCTGTAAAAGAAGTTAAGAATTTTGCAGGCTAG
GTGTAGCAAATATTTAAATAAATTCCATGTGTAAAGGTTCTACCGCCTAT
TCTCTTGAATTTTTTATTTTTCATGCTCAAAAGTAGCCATGATCCCTAAA
GAAAATGATGCTAGAAGATAACAATGTCTGTCAATCAAAATTTACTTCAT
CTTTTGGCCTAAAGCCGGTGTTTCGTCTTTGCCTAGCTTCAGAAGCTCCT
TGTATTTTTTTCGATTGGCGGCATCGATGTTGTGGAACTGTAACAAGTCT
ACTTCCAGCTCCAAATGCGTCATCGATGTAAACTTTTCAGCTTAAAAAAG
AGAGAGCCATAGTCAATTAAAAATTCCCACCTATTCCAAGTAGCCCGATT
CTCATCCCAATTTACATTTGTTCTCTTCATCACTGAGACAGGGTTGTCAT
AAAATAAAACTTACCACTAAGGTACTCCGATTCGCGAAGAACGACCCGCA
TGAAAATGATTTCTTTGTCTGAAATTGCATGCACGTGCTTAGCAATGTTG
TGATGAGAAAAGCTTGAGAGGAAGTTGCCACATAACTATAATAAAAATAT
TTTTCTTATCAGGCTAGAGAATTGGCTGCTGACTTTGATGTGAATGTTAA
GTACGAAGTAACAACCAAAGTGACGGAAGATATTATTTGCAAATATAACT
CTATAGTGAGTGCAACTTTGACTCCTAGGCCACATATAGTCTGCCATTTT
ATGGCACATCATTTGATCTTTTCATTTTCTTTTATGTTTCGGCTTTTACT
AGAAAAGCAAGAAATCTTTGGTATAAGCCAAATATTATACGGTGAAATAC
GACTTTTAGTTTCTATTTACTATCCATTACAGAATTCAAATCAAGAAGAA
GAAAAAGCAGGAAACGTGCCAGAAGTGGTAGAAAATGCCGTTACTTCTAC
TGAGGTAACATACTATAACTTTGTAAAACCTTTTTTGATACTCGTAAATT
TTGTAATTGGACCTTTAAATCGCTCGGTTTATATTTTTGTATCTATAATC
TTACCATCTACAAACTCACCAGGTACAAAGGATAGTTCCCTCCACACACT
CGCCACCCAAGCTTACGCAAATCCCTTGTTCAAGTAAGACTCCGGACCCA
TGCTCAAGCAAAGACCCTGGCGAAAATTCGAAACAAAAAGCCAGCAAAAG
GTATCACACAGTAGAAAACCCTTCAGCAAAGATGCCTGAAATAATCGGTA
TTCCAAGAAAGGCCAAAAAGAAAGAGCCACAGGAAATACCAAACGCCAGA
GAGAACACATGCAAAATTTGTAGCATTGTGTTCTCGTCACCAGAAGACAT
CAAAATGAAGCACAAATTTTCTGCAATGAATTTGCCAATAGTGTGTGGCT
TCAAAGAAGAAACAAAAGGCCAGGATAAAGAATGTACAAATGAGGATGAG
GTGGAGGCTGGATGCGATTACTGGGTGCATGTTAGATGTACTGGACATAA
TGTTCGGAGTAGACCACAGGTGGCAAAGATCCAATTTTTTTGTCCAGATC
ATGCGCCCAGTAAGAAAAAGGATTAACTGTTATTTTTATATTATTTATAT
CAAATAATGTAACATTTAAATTTTAAAATTATAAGTAAAAATGTAGTACC
TGTTCCAGGTTGTCTAAAGATCGT Coding sequence (CDS) from alignment at sc0000123_pilon:737665..742988- >MSTRG.14649.9.p1 ID=MSTRG.14649.9.p1|Name=MSTRG.14649.9.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2748bp|location=Sequence derived from alignment at sc0000123_pilon:737665..742988- (Clytia hemisphaerica_ch_hm2_pilon)
GTACAAAGGATAGTTCCCTCCACACACTCGCCACCCAAGCTTACGCAAAT
CCCTTGTTCAAGTAAGACTCCGGACCCATGCTCAAGCAAAGACCCTGGCG
AAAATTCGAAACAAAAAGCCAGCAAAAGGTATCACACAGTAGAAAACCCT
TCAGCAAAGATGCCTGAAATAATCGGTATTCCAAGAAAGGCCAAAAAGAA
AGAGCCACAGGAAATACCAAACGCCAGAGAGAACACATGCAAAATTTGTA
GCATTGTGTTCTCGTCACCAGAAGACATCAAAATGAAGCACAAATTTTCT
GCAATGAATTTGCCAATAGTGTGTGGCTTCAAAGAAGAAACAAAAGGCCA
GGATAAAGAATGTACAAATGAGGATGAGGTGGAGGCTGGATGCGATTACT
GGGTGCATGTTAGATGTACTGGACATAATGTTCGGAGTAGACCACAGGTG
GCAAAGATCCAATTTTTTTGTCCAGATCATGCGCCCAGTAAGAAAAAGGA
TTAAAATTCAAATCAAGAAGAAGAAAAAGCAGGAAACGTGCCAGAAGTGG
TAGAAAATGCCGTTACTTCTACTGAGGCTAGAGAATTGGCTGCTGACTTT
GATGTGAATGTTAAGTACGAAGTAACAACCAAAGTGACGGAAGATATTAT
TTGCAAATATAACTCTATAATGAAATTCATTGCCCAGGTACAAAGGATAG
TTCCCTCCACACACTCGCCACCCAAGCTTACGCAAATCCCTTGTTCAAGT
AAGACTCCGGACCCATGCTCAAGCAAAGACCCTGGCGAAAATTCGAAACA
AAAAGCCAGCAAAAGGTATCACACAGTAGAAAACCCTTCAGCAAAGATGC
CTGAAATAATCGGTATTCCAAGAAAGGCCAAAAAGAAAGAGCCACAGGAA
ATACCAAACGCCAGAGAGAACACATGCAAAATTTGTAGCATTGTGTTCTC
GTCACCAGAAGACATCAAAATGAAGCACAAATTTTCTGCAATGAATTTGC
CAATAGTGTGTGGCTTCAAAGAAGAAACAAAAGGCCAGGATAAAGAATGT
ACAAATGAGGATGAGGTGGAGGCTGGATGCGATTACTGGGTGCATGTTAG
ATGTACTGGACATAATGTTCGGAGTAGACCACAGGTGGCAAAGATCCAAT
TTTTTTGTCCAGATCATGCGCCCAGTAAGAAAAAGGATTAAAATTCAAAT
CAAGAAGAAGAAAAAGCAGGAAACGTGCCAGAAGTGGTAGAAAATGCCGT
TACTTCTACTGAGGCTAGAGAATTGGCTGCTGACTTTGATGTGAATGTTA
AGTACGAAGTAACAACCAAAGTGACGGAAGATATTATTTGCAAATATAAC
TCTATAATGAAATTCATTGCCCAGGTACAAAGGATAGTTCCCTCCACACA
CTCGCCACCCAAGCTTACGCAAATCCCTTGTTCAAGTAAGACTCCGGACC
CATGCTCAAGCAAAGACCCTGGCGAAAATTCGAAACAAAAAGCCAGCAAA
AGGTATCACACAGTAGAAAACCCTTCAGCAAAGATGCCTGAAATAATCGG
TATTCCAAGAAAGGCCAAAAAGAAAGAGCCACAGGAAATACCAAACGCCA
GAGAGAACACATGCAAAATTTGTAGCATTGTGTTCTCGTCACCAGAAGAC
ATCAAAATGAAGCACAAATTTTCTGCAATGAATTTGCCAATAGTGTGTGG
CTTCAAAGAAGAAACAAAAGGCCAGGATAAAGAATGTACAAATGAGGATG
AGGTGGAGGCTGGATGCGATTACTGGGTGCATGTTAGATGTACTGGACAT
AATGTTCGGAGTAGACCACAGGTGGCAAAGATCCAATTTTTTTGTCCAGA
TCATGCGCCCAGTAAGAAAAAGGATTAAAATTCAAATCAAGAAGAAGAAA
AAGCAGGAAACGTGCCAGAAGTGGTAGAAAATGCCGTTACTTCTACTGAG
GCTAGAGAATTGGCTGCTGACTTTGATGTGAATGTTAAGTACGAAGTAAC
AACCAAAGTGACGGAAGATATTATTTGCAAATATAACTCTATAATGAAAT
TCATTGCCCAGGTACAAAGGATAGTTCCCTCCACACACTCGCCACCCAAG
CTTACGCAAATCCCTTGTTCAAGTAAGACTCCGGACCCATGCTCAAGCAA
AGACCCTGGCGAAAATTCGAAACAAAAAGCCAGCAAAAGGTATCACACAG
TAGAAAACCCTTCAGCAAAGATGCCTGAAATAATCGGTATTCCAAGAAAG
GCCAAAAAGAAAGAGCCACAGGAAATACCAAACGCCAGAGAGAACACATG
CAAAATTTGTAGCATTGTGTTCTCGTCACCAGAAGACATCAAAATGAAGC
ACAAATTTTCTGCAATGAATTTGCCAATAGTGTGTGGCTTCAAAGAAGAA
ACAAAAGGCCAGGATAAAGAATGTACAAATGAGGATGAGGTGGAGGCTGG
ATGCGATTACTGGGTGCATGTTAGATGTACTGGACATAATGTTCGGAGTA
GACCACAGGTGGCAAAGATCCAATTTTTTTGTCCAGATCATGCGCCCAGT
AAGAAAAAGGATTAAAATTCAAATCAAGAAGAAGAAAAAGCAGGAAACGT
GCCAGAAGTGGTAGAAAATGCCGTTACTTCTACTGAGGCTAGAGAATTGG
CTGCTGACTTTGATGTGAATGTTAAGTACGAAGTAACAACCAAAGTGACG
GAAGATATTATTTGCAAATATAACTCTATAATGAAATTCATTGCCCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000123_pilon | genome | sc0000123_pilon:737665..742988 - |
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