MSTRG.15021.1.p1 (mRNA) -

Overview
NameMSTRG.15021.1.p1
Unique NameMSTRG.15021.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000129_pilon:937482..939528-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15021.1.p1 ID=MSTRG.15021.1.p1|Name=MSTRG.15021.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2047bp|location=Sequence derived from alignment at sc0000129_pilon:937482..939528- (Clytia hemisphaerica_ch_hm2_pilon)
ACCCGATCGGAAGAAAGTTTAGAAATCAAAGTGAGATCGGAAAATCGGAT TTTTTTTTTGCCGTCTTATGATGCTGATGATGGAAGAAAATTTTACCTAT TTGAATGCTCAGCTTAGGCTGACCAATAATTGCTTTTACGTGAATGTGAT AATCTCGTTTGACATTCTCACTACTTCGAGAGTGAAGTATTTTCATGTGC AGGGGTTGTCCTTGCTTCTTCAACTATGGAGCAAGTATAGAAATTGTTTC CCGCAGCCAATGTCAGCTATTATTCATTTCTTGCATTCGGTTTACACGAC TTTTTTTATTAGACCTGAGCCTTTAGGTGTTTTGAGTCGAGCAAACCTGC TCTGGTTTAATGTTTGAAAGTATAAGAATTAGCACAGTTGCAAAAGTTTC TTTTATAATTCAGGGTTAATTTTGAGCAAATTCGTTTAGTCTCTATAATT CGCAGGCTGGCCATTACAATGTTCTTATTTTTTTCCAAATTTTAACTTAT ATTTTCTTATAAACTTGATTATAAAAATGAAACCTATATTTCTATTTTAA GGATACTTTCTCAATTTTATTAATATTTCATCAAATTCTTGGTAACATTT GTTTTCCAGTATGAGGCCTTACTTTTTTAATATAATTTTTCTCACTAATT AGAAAGAAATAATATTGCAACAAAAAATCAAAAAATCATCAAATTGGAAT TCAAATTGAAAAGAGAGGAACAAAGAAACATTGGACGGAAGAAAAATTGT TGAAAAATTGAAATAAATTATCGAATTCGAGAAAAGGTGAAATATAGAAC ATCGGTTCAAAGGATAACAGGTACTACTCAGCTACTTTATAAAGACATTT GAAGTGAGCAATCAATCAAGAACGAACTATAATGGCAGTCTCCAGAAAGA TGGCGAGTTTATCTCTAACAAACGACCAACCCGAGAGTGTGTGTCCAATC GCAAACACCAGAAACTTACCTGACTTCAAAGTTCAATCGCAATGTCCTTT CCACAAGAAAAGACATGAAGCAGCTTTGATACCGAACTCTAAAGAGAAAA TCTATGAGACGGACGAGTTATTGAAGAGTATCGGGGGCGGAGATAAGGTC CGCCAAATGTGCACCCGATTTTACGCCCATGCTTTTGAAGACCAAACACT AACTAAATTCATGTTCGAAAAAGATTGCGCGGCCGCTCACGGTCAACGCT TAGCAGATTGGTTTATTGAACGAATGGGCGGTGAAGGAACACCTTGGGCG GATTCAGGGCGGTCTGGATTACGCCAATATTCACATTTTCGGGCGTGGAA TTCTTCAAAACGCCCTGAAGAAGAACGAGGGATTCGATTCAAGTTGGATG ATTGTCGTATTTGGATGCGATTGATGTTTTGGTCAATGAGGGAAGTCGGG CTAGACAAGCAGCCTACTTTCGTGCACTGGTTTTCAGCGGCTATTGAGCG CTTCATCGGGATCTACGAGCGGAGTGCACCTCCTTACACTAAACGAGATT TGAAATGGTCAGAGAAGAAGAAGAATATCGATAAATATATTTCGGATGGT TTTTTAATGAAAGATGTTGTAGGGAAAGAACGCTAAACGGAAATATTTTT CCCCGAATGTTTCCCCGATTGACCTTTAATGGGTTAATGATTCCATTACA AAGACTTTCTTGTACATCATTAAACATGACATAATTATGCGAAACCCAAT GAAAGACATCTTTTAAAAGAACGCTAATTCGGGTTACTTTTCACCGGATT TCTTAACCCGATAAATATAGAGTGTTGATCATTCTATAACAAGCAGTGAC CTGTATATAAATATGTTATCATTACACTACATAAATAATTTTGTAATTAG TTTTGTTCATATTGAAAAATCGAAAATACGCAAACTCACCCTTTCTATGA ATGTATTTTTCATCATCTATCGATACATCCCGAGAGTGTACTCTCGGGTA CCTAATAGCCGGGGGGGCCCGCTAATTAATTTTTCGAAAATTTTCCACCC AGGACATTCTTATTCCAACCCCCCCGCTTATTGATTTTTGGGAAATT

Coding sequence (CDS) from alignment at sc0000129_pilon:937482..939528-

>MSTRG.15021.1.p1 ID=MSTRG.15021.1.p1|Name=MSTRG.15021.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=705bp|location=Sequence derived from alignment at sc0000129_pilon:937482..939528- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGTCTCCAGAAAGATGGCGAGTTTATCTCTAACAAACGACCAACC
CGAGAGTGTGTGTCCAATCGCAAACACCAGAAACTTACCTGACTTCAAAG
TTCAATCGCAATGTCCTTTCCACAAGAAAAGACATGAAGCAGCTTTGATA
CCGAACTCTAAAGAGAAAATCTATGAGACGGACGAGTTATTGAAGAGTAT
CGGGGGCGGAGATAAGGTCCGCCAAATGTGCACCCGATTTTACGCCCATG
CTTTTGAAGACCAAACACTAACTAAATTCATGTTCGAAAAAGATTGCGCG
GCCGCTCACGGTCAACGCTTAGCAGATTGGTTTATTGAACGAATGGGCGG
TGAAGGAACACCTTGGGCGGATTCAGGGCGGTCTGGATTACGCCAATATT
CACATTTTCGGGCGTGGAATTCTTCAAAACGCCCTGAAGAAGAACGAGGG
ATTCGATTCAAGTTGGATGATTGTCGTATTTGGATGCGATTGATGTTTTG
GTCAATGAGGGAAGTCGGGCTAGACAAGCAGCCTACTTTCGTGCACTGGT
TTTCAGCGGCTATTGAGCGCTTCATCGGGATCTACGAGCGGAGTGCACCT
CCTTACACTAAACGAGATTTGAAATGGTCAGAGAAGAAGAAGAATATCGA
TAAATATATTTCGGATGGTTTTTTAATGAAAGATGTTGTAGGGAAAGAAC
GCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15021MSTRG.15021Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15021.1.p1.exon1MSTRG.15021.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15021.1.p1MSTRG.15021.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000129_pilongenomesc0000129_pilon:937482..939528 -