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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:824201..827400+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13833.1.p1 ID=MSTRG.13833.1.p1|Name=MSTRG.13833.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3200bp|location=Sequence derived from alignment at sc0000112_pilon:824201..827400+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGAGGGACTTTTTTAAACGAAACTATATAGCATCATATAGCATCAGCTC
AATTATTTTGTCTTATTGTTTTATATGACCACATATTGTTTAATCggttt
atttttcatgatataTAAAGTCTGACCTTAGATATGACAGAAAAATCAGT
GAGAACGAAAGAAGGAAGCATAAGATTGGTTTGCAAGTCAAAGCGCCTCG
AAACAAAGTGGACGACGCTACAGATACAGATACAGTGCTAACAAGATGCA
gatattggtcaaaattttaccTTTCTTATTCCTTGTAACTCAACAGGCTC
AAGGTATGTTATTGTTTCCCTCTTTAAGAATGATGTTAGAATCTTAATAA
GTTCTACCTACAATTTCGTGTCTTTCTCCTTATGAATGGGGTGAATTAAA
ACTGGTTAGTGAATATTTGTGACCAATATTACAAAGATTTAACTATAATT
ctaagttaaaatttttctaaGTCGGGTTTAAAGTTTGAAGTTGAACCACC
CTACAGTACCAAATTTCTCCGCGAAACATACAAACACATggcaagatttt
tgaaaaggggCAATATCCCCGGTGGGTTGGTGGTTCCTgggggggCCAAA
TCTTCGGTCTTTGAGCTCGGACATCTTTTCCACTTTTCGAGTCCATTATA
GAACAGTCTAAACATTCACTGGAGTCTCCATATAATTGGAACCCCTATAA
CATTCACTGGAGTCTCCATATAATTGGAAGCTCTATAGAAATTCACTGGA
GTCTCCatataattcgaacctctataacatTCACTGGAGTCTCCatataa
ttcgaacctctataacatTCACTGGAGTCTCCATATAATTCAAACCTCTA
TAACATTCACTGGAGTCTCCatataattcgaacctctataacatTCACTG
GAGTCTCAatataattcgaacctctataacatTCACTGGAGTCTCCatat
aattcgaacctctataacatTCACTGGAGTCTCAatataattcgaacctc
tataacatTCACTGGATCTCCatataattcgaacctctataacatTCACT
GGAGTCTCCatataattcgaacctctataacatTCACTGGAGTCTCAata
taattcgaacctctataacatTCACTGGAGTCCCcatttaattcgaacct
ctataacatTCACCAGAGTCCCCatataattcgaacctctataacatTCA
CTGGAGTCTCcatttaattcgaacctctataacatTCACTGGAGTCTCCa
tataattcgaacctctataacatTCACTGGAGTCTCcatttaattcgaac
ctctataacatTCACTGGAGTCTCAatataattcgaacctctataacatT
CACTGGAGTCTCCatataattcgaacctctataacatTCACTGGAGTCTC
catttaattcgaacctctataacatTCACCAGAGTCCCCatataattcga
acctctataacatTCACCAGAGTCCCCatataattcgaacctctataaca
tTCACTGGAGTCTCCatataattcgaacctctataacatTCACTGGAGTC
TCCatataattcgaacctctataacatTCACTGGAGTCTCCatataattc
gaacctctataacatTCACTGGAGTCTCCatataattcgaacctctataa
catTCACTGGAGTCTCCatataattcgaacctctataacatTCACTGGAG
TCTCCAGGGAAAGGGAAAGCCTCGTAAAATACTCTactatttgaatcttt
ctctaattcaaagaacattttttgtcccttgaagatcgaattagagaaac
aACTGTATATGTATATGTCCCGTGTTTGTTCGAGTTTAATGTAGTAACTC
CATAGAGCAGTGGACTAGCGATATTCAAAAGTCAAGTTTGATTCTCATTC
TAGTCCTCAGTTTAGTTTACTAATAAACTAATGTCTTGTAGCTATTCCTG
TGTAAGCACTCTCCTTGACGATGGTATGAATTTCCACTGATGTAACTTTG
AACTTGATTACAGGGAAAAGTATAAGCCAAGCTGGTCTAGACCTTATTAA
AAGATTCGAAGGTCTTCGCTTGACAGCTTACCAGGATGCAGTCGGAGTTT
GGACTATTGGTTACGGACATACCAAAGGTGTCCGGGCAGGTCAAACAATT
ACTGCGGAACAAGCAGAACTCTTTCTCCGTCAAGACGTACGATCAGCAGA
AAATGACGTTGAGAAATCCGTCAAAGTTTGgataaatcaaaatcaatatg
ATGCACTTGTTTCATGGACCTTCAATCTAGGTAAGAAacctacacacttt
tttatgaaTGAAATCAGTTACTAAGGCTCTAGCCCTGAAGTCAGCCGAAT
ATTTTTTGACACGTTTGGTAAAGGAAAAGTTTTATAAATAAACCCAACAG
AGAAATGGTGTCTCTCGACCCAGTGAGTATATATAAGTCCGTGCCACCTA
GAACGTCCTGAGAAATGAAATATGCGAGAAGATTCTCACAAAAATTAATC
AATATGGAAATGTTGGTATAAAAAGATTGAAGACTGAACTTTTATGAATA
GAGTATAGCATAGCATGTTTTGAAAGTGAGGTAAGCGGCGAGGTGTTCAT
GACattatttatgaaaaggttttcTTTCAGGCGAGATAtaactaattttc
gtggtaTCTTATTTCggtgtttttttgtgtttatcgcgaaaattagtttc
gtAAAACACCaagtaaattgaaattttgacaaaaatttggttcTTTTAAA
GCATCTCTGTTGTTCTTAGGTGGTACAAATTTAAGGAAGTCTACCATGTT
GAAAAAACTGAATGCTGGTGATTTTGACCGCGTTCCATGTGAAATGATTC
GATGGGTTTATGCTGGTGGTAAAAAATTGCCTGGATTGGTGAAAAGAAGA
TACGCCGAAGCTACTTTGTTCAACGATGGTCCGtttttttGTTAATGTTT
CACGCTTTTTTGTAAGCACATTCAAAGAACCTTTGGAtggtcttaacttt
tttagttttaagcctttgAGGGGTTCTTAACAggttcttatttttacaat
tttgtgagtattttagtccatttttctaagaaatcagaTCAGGAGTTAAA
GAGTccgtaaaaatttaaaatgttccTCTTATCATTTTGTCCATCATACT
TTAGCCACATGTTCacatataccttaagggaagaaattttcgcgagaaga
Coding sequence (CDS) from alignment at sc0000112_pilon:824201..827400+ >MSTRG.13833.1.p1 ID=MSTRG.13833.1.p1|Name=MSTRG.13833.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1503bp|location=Sequence derived from alignment at sc0000112_pilon:824201..827400+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAgatattggtcaaaattttaccTTTCTTATTCCTTGTAACTCAACA
GGCTCAAGGGAAAAGTATAAGCCAAGCTGGTCTAGACCTTATTAAAAGAT
TCGAAGGTCTTCGCTTGACAGCTTACCAGGATGCAGTCGGAGTTTGGACT
ATTGGTTACGGACATACCAAAGGTGTCCGGGCAGGTCAAACAATTACTGC
GGAACAAGCAGAACTCTTTCTCCGTCAAGACGTACGATCAGCAGAAAATG
ACGTTGAGAAATCCGTCAAAGTTTGgataaatcaaaatcaatatgATGCA
CTTGTTTCATGGACCTTCAATCTAGGTGGTACAAATTTAAGGAAGTCTAC
CATGTTGAAAAAACTGAATGCTGGTGATTTTGACCGCGTTCCATGTGAAA
TGATTCGATGGGTTTATGCTGGTGGTAAAAAATTGCCTGGATTGGTGAAA
AGAAGATACGCCGAAGCTACTTTGTTCAACGATGGTCCGtttttttGTTA
AATGCAgatattggtcaaaattttaccTTTCTTATTCCTTGTAACTCAAC
AGGCTCAAGGGAAAAGTATAAGCCAAGCTGGTCTAGACCTTATTAAAAGA
TTCGAAGGTCTTCGCTTGACAGCTTACCAGGATGCAGTCGGAGTTTGGAC
TATTGGTTACGGACATACCAAAGGTGTCCGGGCAGGTCAAACAATTACTG
CGGAACAAGCAGAACTCTTTCTCCGTCAAGACGTACGATCAGCAGAAAAT
GACGTTGAGAAATCCGTCAAAGTTTGgataaatcaaaatcaatatgATGC
ACTTGTTTCATGGACCTTCAATCTAGGTGGTACAAATTTAAGGAAGTCTA
CCATGTTGAAAAAACTGAATGCTGGTGATTTTGACCGCGTTCCATGTGAA
ATGATTCGATGGGTTTATGCTGGTGGTAAAAAATTGCCTGGATTGGTGAA
AAGAAGATACGCCGAAGCTACTTTGTTCAACGATGGTCCGtttttttGTT
AAATGCAgatattggtcaaaattttaccTTTCTTATTCCTTGTAACTCAA
CAGGCTCAAGGGAAAAGTATAAGCCAAGCTGGTCTAGACCTTATTAAAAG
ATTCGAAGGTCTTCGCTTGACAGCTTACCAGGATGCAGTCGGAGTTTGGA
CTATTGGTTACGGACATACCAAAGGTGTCCGGGCAGGTCAAACAATTACT
GCGGAACAAGCAGAACTCTTTCTCCGTCAAGACGTACGATCAGCAGAAAA
TGACGTTGAGAAATCCGTCAAAGTTTGgataaatcaaaatcaatatgATG
CACTTGTTTCATGGACCTTCAATCTAGGTGGTACAAATTTAAGGAAGTCT
ACCATGTTGAAAAAACTGAATGCTGGTGATTTTGACCGCGTTCCATGTGA
AATGATTCGATGGGTTTATGCTGGTGGTAAAAAATTGCCTGGATTGGTGA
AAAGAAGATACGCCGAAGCTACTTTGTTCAACGATGGTCCGtttttttGT
TAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:824201..827400 + |
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