XLOC_026735 (gene) - C. hemisphaerica

Overview
NameXLOC_026735
Unique NameXLOC_026735
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003828:1949..5695-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026735 ID=XLOC_026735|Name=XLOC_026735|organism=Clytia hemisphaerica|type=gene|length=3747bp|location=Sequence derived from alignment at sc0003828:1949..5695- (Clytia hemisphaerica)
CTCCTTTTTTGATTTTATCAAACGCACAAAAACAACAAAGCAGTCTTCTT
GAATTTGGCGGCAAGCAAGATGGCGGAAAGTTCCCATTGAGCTTAAGATT
TGAAGTAGCATGAAGGACTTTATTGTCAAGAATAACAGAATTTACTCCAA
GCTAAGTATATTTTATTATCTTTTTACAACTTCTATTGTTTTTTTGGGAT
TGAAGAAAGTTATTAAAAAATGATAAGAAAGATTTAAGACAGAAAAAAGG
TACTATACTGTTTGAAATTTTTTATGGCTTTTGATGCATTTTTTTTCAAG
GACGGTGTTGCTATTATTTCATTGCTGTACATTATATGCTGCATTGTATA
GTAAAGAGAAAAGCAAGCTTGAATTACAGATTTTGAACATAATTTAGATT
TACTGTAGCTAGGATTCTGTTTTTATGTTGTGTTGTGTTTGTATTCTCTT
CATTTTGGTTTTACACATATTTTGATTTCGTCCATATTATAGTAAAAATC
TTTTGATGTATGTAAATTTTTGAACAAATATTTCCAATTATGGCAAATGC
CAAAACTAAATTTAAGTCGATTTGTTGATTAGAGATGGATCATTATTTCT
CCCTTAGATCTTTTTGAAACACTGTAATATCTGGCATATGTGTAGTCATC
AAGCATGCCAAACACATATCAGCATTAGCCATTCAATAGAGTGTCAAAAT
GTGGATATTACTTTGTTTTAAAACTAAGGGACTAGCTTATGATTGTAATC
TTTGGAACAATACAAAATCTTTGAAGTTCTTTTGAATCAGATGTGCATGT
TGTTAGTCATTTTAATGCCAAAACAACATCAACAGTCAAAACATTCTAAA
CCATGTTTAAACTGTAGAAATTATGATTCAATTGGACTTTCATTTTTTTG
TTTTGTTTTTTGTAATTACTTTCAAAGCTTCTTATTTTTTTTTAATATTG
GAAAGCATAATGCTAAAAAAAAAACCTTGTGTACTATAACTTCTGAACAT
TTTTGTAAACAAAATAATTCAGTTTGAGATAAATTTGTTCTGCAAAGTTT
TTTTGTGCATGAAAGTTATTTGACGAGGTGTTTAGATTTTCTCTATTAGG
CAAGTTAAATTTTTTTAGATAAATCTTTAATTATAAGTGCAAGTTTATGC
TAATCAGTAACCATTCAGTTAGCCATGGCCAGATATATTTTGGATTGCAT
TTTCCATTATCCTGTTTAACCTGAATTTCTTGGTTGTAGACTGTTTTTGA
TCTTTCTTCTATTAACTCTGCCTAAATCCTTGTTGTAAGGCCATGGCCAA
AAAATCTGTAGCTTCACCCAACAATTGAATTAGCACTTTTTGTTATTTAA
TGCTCACAATTATAAAGTATTTTATATTTATTTTTTATTTTAGCACTAAA
GTGATGTTGCGTGTACATTGGCATTGTTTAAATTTCAAGGAAATAAACCC
TAAACTAAGTAAGTCATTATTATGTCGCAACATGGTCCTTACTCAGTATC
TTGACCCTGCTTGACTCTCAAAATTTTATTTTACTTCCTCTCCAATGAAG
AAAGTGGTCAGTAAAAGACTACTATAAAACAATATAAATTCTTTCCCTGT
TGGTTTTTTGATAGAAATGTTCATCCCCACCGTGAGAATAAGTTCCACCG
GGGCTGTGAGACAGGAGTGTTATCAATAAAAACAAAGCTTGAGAAGTAAA
GAGTTAAAATACCTGGACTTTTTCATCAGTGAAATATTTTTCCCTAAAAT
GTCTATCAAAAAGAAATTTCGAATCACCTCTAGATATGATTCTCAATAAG
TTTGCGCAGTCTTTAAATGTAACTTTTCAAATTGATTGCCCCTCCCAAAT
GTTTTCATCAAAAGTTGCAAAAGACACCCCTGTCTCACTGCCCCTTTGGA
ACTTTTGCTTTCAGTGGGGATAACAAAATTTTTATCAAAATCCCAATGGG
AATAGAAATTATATTGTTCCAAGGTTAAAAGATCCAGTGGGGATGGTTTT
TAGATGCAATTTTTAAACATTGAATTTAGAATGGGGATGAAATGTAAGTC
AATTTTTATAGTGGACTGGAATCTCAGGGTAATTTTCCATCGGGAACGAA
GACAAATTTCTTCCCAAATTTCCCAAAGGAGCTTTGACGGGGCTTTGCCC
TATTATTAGAACACATACCGTCTGGTCCCTCAAGTGTAAGGTTTTACGAT
TTAGCTGGTGAAGAACTTAAGGCGTCACTTAAACTATAAGATTTTGTTTT
TGTTCCTTTTTAGGAGCTACAAATCCTTTTGTCTGCACAAGTGAAACCAA
CTGATTAGCCGAGGTAAGAATAAATATTTTTGAATTATCTTCGATTACTT
GCGTATAAGCCTATTATTCCTTTCCCCATGTATATAATAACTATATTGAG
AAATGTACAATTTTAGATTGTTTTTCATAAGGCAAAAGGATCTAATATGG
TTAACACTTTGTTTCACTTTTCAAAGATATTTAACCATATGAACACTTGA
GCTGATTTGTAACTCTCAAATAGCGCTCCGCAACGCATACGTCATAATTA
TTACTTTTTTTGACATTTGTACGAGTTGCAATGCAGCTCAATTCTCAATT
AAAGATAAGTGCAAGTTCTTATATATCTTTTGTCAAATGATGCAATTAAT
GTGCAAAAGAACTGAAAAGAAACGCAAAAGGATCGGAGCTCGTACAAACA
CTTCAAGAAGAGTAATGATTATGTCAAAAGTGTGCACTATATAAACCTTA
AAAGATGCTTACCCTATTTCCCATTCAAGCTACCAAATTGACAGAATTTT
GGAACTCCTTCTGAAAATTTTATTTTGTCTTTCAGCTATCACTTGGAACT
TTGACGTAAAGAAATTATTAAACGGTTGAGCAAGACAATATTTTGGTTGG
TGATGAATAAAGATTCGGATGCCAGCGACTTTAATATAAGCATAATGATC
AAATGATTGATAAATATATACTGTATTGTGTCACAGACCCGGTGGTACTT
CTACATACTGTAAAAATCAGACAAATTGTACCCGGTTTAGAGAAAAACCC
TGACTTTCACCCACCCGGTAATCTATAATGAAGGTCTATCTCTGAAGCTG
TAAACAATACCCTTTCACCTTTTTTATAAAAACGTTTTTTAGCCTTGGAA
TGTTCCTAACTTTTTTTCTTTTAAAAGCCTAAGAATATTTTTATTTTCAT
CTTTTAATGGGTATTTTATCCATTTTCTGAGAAATTGGGTCCAAAATGTT
CTTACATTTTAACAAACGAAGCCTTATGTTCTTATAAAGAAAACATGTGA
AATTACACAATCGTTTAAGACAAGCGATCTTTCATTCCCATCGTAATTTG
TACCTTAATTTTATGTCTACTACAGTACACTTTTTTTTATAAGAGCGAGT
AAATTTTTGGTGAGGCTCGGATGTTCTTATTTTTTTTGGCACTTTGAGCC
TTAATTGTTCTTATTTTGTTCTTATTTTTTCTAAGGTAAAAACAAGTTTT
GGCTATTTACTTACTGTTTAGAGGATTTTAGAAACCAGTGATTCTTTTTG
CTATAACTCTCTAACTTTAGCCTCTCCACTGTTCTTAAATTATTCTTATT
TTTTGGCATTTTTGAGCCTCGTTGTTCTTATAAAAAGAAGTGTATGTTTT
TCACCGGGTTACTGATACAGGGTTGTTAAAATTTTGTACTGTCGATTTAG
TTGTTTGATCGGTTCGAGGATACTTTTACTATCAATAAATTATTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042978TCONS_00042978Clytia hemisphaericatranscript
TCONS_00042977TCONS_00042977Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003828supercontigsc0003828:1949..5695 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.57	0.57	0.12	0.25	6.73	4.37	3.37	3.3	4.96	2.61	3.58	3.81	3.21	2.86	2.31	1.57	3.11	3.13	0.61	0.97	4.53	3.74	1.66	1.86	2.59	4.66	1.35	0.53	0.5	0.44