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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:446776..451392+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17736.1.p1 ID=MSTRG.17736.1.p1|Name=MSTRG.17736.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4617bp|location=Sequence derived from alignment at sc0000182_pilon:446776..451392+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaatgaaaaaagaagatatTAATTTTGTAGTAACTTTCAAAATAACAG
AAATCGAGTTGACTTGAACTTGATAGTGAACTAACAGTATAGGTCAATGG
TTGGATCAGTGCTACTGAAAAATCTTTAGACATGGAAAGGAAAATTTCTG
CCGGATTGAAGTCAATGAAGATGTGATTTGATAGTAATAGAAACAAATTT
TAACGATTAGAAAACCTCTTTTGGAACTATCAAATAATAATTCAACTCAA
GAACTGAAGACTGAGTGTAATGGCGCGCTGGATTAGAAGAAAAACGGCAA
ATAGTAAAAAGAAgtacaaacacaaaacaaatacACCGAATATCTTTCCA
TGGATTTTGTTATTAATCCTGATTGGATGGACCCTTTGgggtaaagattt
ttttttaagactttaaaaccatttttcaaaattcaacctCTTAATTTCAA
GTTGTTCAATTGACCTATCAACCCTTCCTTAGTGGCGTGGTCGGCTTTTT
AGGGAGTTGggaacaaatttaaaaagaacaattattCTCGGCGCGCGAAA
TTTTTAGGCTACAACCAAATCAAACTTATAAAATTCCGGCCCAAGCTCTA
GAGACATTTTCTCGAGTCTTTGCGGTGGAGTGCAAAGTATTTATAGCATT
CGAATAGCTTTACTATATCGACTTGATCACTTAAATGCAAGggtatctta
catttttcacaagagcACTCCTACACTTGTGTTTTCGATACCGTCGTTTA
GAGCAAAATAATTAGAATTTctgggcaaaaatttgcaactttTTCTGGAT
TTGCTGAAGTtttcacccttacagtgtatttatTATAAAGTAAACCCTTA
AAATGCATTTCTGCTATCTTGTGTTTAGTGCTCACTGGTCCCGTACTTCT
TAACTGAATCAGGCTTCCAATATAATAAAAAGTGTGTCCGGTTTAAGGGT
AGGGTActgacatccactaacggattcgtgctcttTGTAGACTAGTTCAC
CATTATGTTTACTCCCGGATGAGTATTAAGAGTACTAGGGTTAGAGGGTG
GTAGGTATGTATGGATTTGATAAAGCCCTGACCCTTAGAGAGGGACTAAA
TTTCCGTCGAAACCCTCGAAAAGCGACTATCAGATGTTCGATTTCCAATA
TTCTTAATAGAAGAAATTGTTATTTCTTTTTAGCCATTTGGCATTTCTCA
AGAAGTGTCATTGTGCCATCTTTGATCAAACGAGTGACTCCTCgaaaaga
gaagagtttccaggaagattttaaagaagaaaacgaagaagaagccTTAA
TGATGATCGatgaagatgaaatttttcgaaaagaaatgGATCTTATCTCA
GGGTATATTTACTTTCCTTCTTACTAACtgcattattttttttcattcta
taGCAACATATTTCACAGgcctattgacctctatgatacagaatttttga
tttttcattgtATAAAGTTTTTCCTcccattcttttatcaaacgctcttt
gaagacttgtaaggatggtgcttcaacaatatcttcttctagagatcatt
ccaaggtttacacttctgtaaaaaaaggGTCCATTTGTTTCAGCACCATT
TATGCCACTTATGCCACCTTTTTCCCATTTGTTTCACCAAAATGGgttca
aaagtgttaaaaaaaatatttacatttttaccaCCTTGATTTACATTGAT
CATTTGTGTTCTTTGTGTCAAAAGTGGAAGTTtgccaagcttttccaagc
aaaaagaaattcgcaTTTGTTTCTGCATTCTGGGTCAAAAGTTGAAGAAT
GTTATTGTAAATGGCGGCAATAATCGAATGCATAATTACGAtgcgtttca
ctttcgttttcttgttagtttgtttacatttccgACATAATTTATGCGGC
CATTATTGACGTAACTAAGAGTTCGCAAAATGGTAGACTTttgcattttt
aacacggttTCCATTTGTTTCACACGATGGTGGCATTTGGGGAAAAGATG
GCAAAAATGGAAGTTTTGAGGTAAGAAACAAATGGACCCAAAGAGAGTTG
TTTTGGTAGTTGCTTTCATACTgtaattagcaaagttcctttgaagctcg
taatcatgctgacgtaGATACATGTCATTCAACAGGGGGCAACCATTCAT
ACAACATCAATATATTGTATAAAGGGGTTCCACGGCGTAGAAAGTCAGGG
ATCACTTTGTGATATGGAATAAATAAAAGTGATAGATGGagtgaaattaa
ttttgataatGTCCAGTTAATGATgatagatgaacgttgaaaaaacatTG
TGTTCTAGATGTGCTATCATGGCAACCAGATAAGAATAACAAGGGATTAT
TGGGAATAATTCAAAGACATGGTCAAACGAGAGGCTGAGCTTTAAATTGG
CTGATAAATATAACTCCAAGGGCTCTTAAATCGAGTAAACACTATAAAAT
TTTACATATAAACTGTTACTGTCGAACCCTTACAGCTCAAACCTCCATCA
CAGACTTcttaagcccgaagggctaagtAGAGTGCTTTGGCTGGAAAgcg
tgccgaggttaggtaggagaTCCTATCTAGGTTACACGCTTGACAAATCA
GAAGCGTcacggattttcgaaaacaatagcaacaataacttttgcgatat
tcacttttggaaaagttcgaagcactctatctagcccttcgggctttaca
gaaatcagTGACCTCTACACGCCAAAAGTCTTCAGCGTTTGAACGAGCCA
GCCCTTTGGCCGTTCGAGATATGGAGAAAACGATAACATTCAAAATATTC
CATACCCTAAATAACCGTAAAATTATCCTTCTAGCTCAACTTGCAAAAAT
GGACCTTCGGGTGTACTACTTTTAAAAACGCATAAAACAGGAAGTAGTAC
ACTGGCTAATATACTCAACCGTTATGCTGATCAAAACAATCTACTGATGG
CCATCCCTCATCGCAATTCGCGATTTGATTGGCCGCACATGTTTAATGTG
AAATCAGTTGATCAGAAGTTAATGAACAATAGACGAGCACAAGTTTTAAC
CAATCATGCGAGGTAAATTCTCCTAATATCATTAatataatacgcttaaa
tcggaactctcccattctcgcgtagtttttcgctagcgattttgaAGCAG
ACAGCAATTcattttcgcgccttttctgttttgatctttcaatacagtaa
aaaataattttcttaaagttAACTAGAAATCCTCACTTCCAGATAAATTA
TTCCTGTTTTAAGGTTAGTTATTTATTCCGTGAGACAAGATATTGTTTTC
CTGAAACTAGATATTTATGTAATCTAGATAATTTATATAGGGTTGTTAAT
CTCGTTATTAATATTATCATTGAAATGACGACCATCTTTTCAAAGGTGTT
TGGCCCAAGCCAATAATAGAGCTagatatttttgaataattcaGGCAAAA
ACATTACCTTAATGCAACGTGTTTGGCGTATTTTGAGAACTAATTTAGGC
CAATTTGGCccaaaatcgccaaaattaaaaaactgtCACCCTTGAATCGG
TTCCTTGCCTAAAATTAAGCTTAtaatgattttctgaaaaataaccCCTA
GTTTTTGTCAAAAACGCTCATTTCTATAAGCCCGCTATCCACCAAAATTA
GCTCtggccaaaattagttcccttgaAATGAGATTATTCTAAACAGCTAA
ACCCGAGAGGAATGAGCAAGAATTCTAAAATATCtcttacaaattttttt
tcaggctcAATCGCGTCGCAATGGACGAAGTCATGGTGCCGCGAACCCTC
TACATCAGCATTTTACGAGACCCGGTCAAGCAATTTGAAAGTTCTTTCTA
TTACCTAGAAATGCATACATTTTTCGGTCTAAAATTCTCCGAAAACCCAT
TACAAGACTTTATGCAAGACCCCAATAAACAcatgaataaattaaaaagc
cggcaaaaacctgaaaattatgGATTATTTAGAGACGGTATGTTATTCGA
TCTGGGTTATGATCAATTAGAGCTGAAAAGAATTGGTGTACGAAAGGCAA
TAGAAATtctagaaaaagaaataaatctaTTCCTTATTTTGGAATACTTC
GATGAAAGTTTATTACTGCTGAAAAAAGCAATGTGCTGGTCATTGGAAAA
TATCTtatatttcaaacaaaatcaacGTACCACAAAAATCCCAATTAACA
CTGCAACAGCTTCAAAGATTCGTGAATGGAACAAAGCAGATGTGGTGCTA
TATGAACATTTCAATGCAACATTCTGGAGGAAAGTTAAAGACTATGGACC
GacttttaaagaagatttaaaAGAATTACGTCATTATATTCATGAATGGT
CGAAACGTTGTGATCGTCAAGAAGTCGTTAAAGGCAAAGATGCAAGTGCT
GTCAGATTTTATAAAGTTGGACACAAAGCCAAGCCAGAACACCGAGAAAT
GTGTCAACGGTTTTTTCGTAAAGAGCTAGAATACATTCAAGAGTTTAGGA
TGagttattttaaagaatttcacGATAAAATGcaaatatataataaattt
aAAAGGTCCCCTACCTAAATATCAAAGGTTGAACAAACATATTATATTAG
GCGTAGTTTTGAAACAT Coding sequence (CDS) from alignment at sc0000182_pilon:446776..451392+ >MSTRG.17736.1.p1 ID=MSTRG.17736.1.p1|Name=MSTRG.17736.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5328bp|location=Sequence derived from alignment at sc0000182_pilon:446776..451392+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGCGCTGGATTAGAAGAAAAACGGCAAATAGTAAAAAGAAgtacaa
acacaaaacaaatacACCGAATATCTTTCCATGGATTTTGTTATTAATCC
TGATTGGATGGACCCTTTGggCCATTTGGCATTTCTCAAGAAGTGTCATT
GTGCCATCTTTGATCAAACGAGTGACTCCTCgaaaagagaagagtttcca
ggaagattttaaagaagaaaacgaagaagaagccTTAATGATGATCGatg
aagatgaaatttttcgaaaagaaatgGATCTTATCTCAGGCTCAACTTGC
AAAAATGGACCTTCGGGTGTACTACTTTTAAAAACGCATAAAACAGGAAG
TAGTACACTGGCTAATATACTCAACCGTTATGCTGATCAAAACAATCTAC
TGATGGCCATCCCTCATCGCAATTCGCGATTTGATTGGCCGCACATGTTT
AATGTGAAATCAGTTGATCAGAAGTTAATGAACAATAGACGAGCACAAGT
TTTAACCAATCATGCGAGgctcAATCGCGTCGCAATGGACGAAGTCATGG
TGCCGCGAACCCTCTACATCAGCATTTTACGAGACCCGGTCAAGCAATTT
GAAAGTTCTTTCTATTACCTAGAAATGCATACATTTTTCGGTCTAAAATT
CTCCGAAAACCCATTACAAGACTTTATGCAAGACCCCAATAAACAcatga
ataaattaaaaagccggcaaaaacctgaaaattatgGATTATTTAGAGAC
GGTATGTTATTCGATCTGGGTTATGATCAATTAGAGCTGAAAAGAATTGG
TGTACGAAAGGCAATAGAAATtctagaaaaagaaataaatctaTTCCTTA
TTTTGGAATACTTCGATGAAAGTTTATTACTGCTGAAAAAAGCAATGTGC
TGGTCATTGGAAAATATCTtatatttcaaacaaaatcaacGTACCACAAA
AATCCCAATTAACACTGCAACAGCTTCAAAGATTCGTGAATGGAACAAAG
CAGATGTGGTGCTATATGAACATTTCAATGCAACATTCTGGAGGAAAGTT
AAAGACTATGGACCGacttttaaagaagatttaaaAGAATTACGTCATTA
TATTCATGAATGGTCGAAACGTTGTGATCGTCAAGAAGTCGTTAAAGGCA
AAGATGCAAGTGCTGTCAGATTTTATAAAGTTGGACACAAAGCCAAGCCA
GAACACCGAGAAATGTGTCAACGGTTTTTTCGTAAAGAGCTAGAATACAT
TCAAGAGTTTAGGATGagttattttaaagaatttcacGATAAAATGcaaa
tatataataaatttaAAAGGTCCCCTACCTAAATGGCGCGCTGGATTAGA
AGAAAAACGGCAAATAGTAAAAAGAAgtacaaacacaaaacaaatacACC
GAATATCTTTCCATGGATTTTGTTATTAATCCTGATTGGATGGACCCTTT
GggCCATTTGGCATTTCTCAAGAAGTGTCATTGTGCCATCTTTGATCAAA
CGAGTGACTCCTCgaaaagagaagagtttccaggaagattttaaagaaga
aaacgaagaagaagccTTAATGATGATCGatgaagatgaaatttttcgaa
aagaaatgGATCTTATCTCAGGCTCAACTTGCAAAAATGGACCTTCGGGT
GTACTACTTTTAAAAACGCATAAAACAGGAAGTAGTACACTGGCTAATAT
ACTCAACCGTTATGCTGATCAAAACAATCTACTGATGGCCATCCCTCATC
GCAATTCGCGATTTGATTGGCCGCACATGTTTAATGTGAAATCAGTTGAT
CAGAAGTTAATGAACAATAGACGAGCACAAGTTTTAACCAATCATGCGAG
gctcAATCGCGTCGCAATGGACGAAGTCATGGTGCCGCGAACCCTCTACA
TCAGCATTTTACGAGACCCGGTCAAGCAATTTGAAAGTTCTTTCTATTAC
CTAGAAATGCATACATTTTTCGGTCTAAAATTCTCCGAAAACCCATTACA
AGACTTTATGCAAGACCCCAATAAACAcatgaataaattaaaaagccggc
aaaaacctgaaaattatgGATTATTTAGAGACGGTATGTTATTCGATCTG
GGTTATGATCAATTAGAGCTGAAAAGAATTGGTGTACGAAAGGCAATAGA
AATtctagaaaaagaaataaatctaTTCCTTATTTTGGAATACTTCGATG
AAAGTTTATTACTGCTGAAAAAAGCAATGTGCTGGTCATTGGAAAATATC
TtatatttcaaacaaaatcaacGTACCACAAAAATCCCAATTAACACTGC
AACAGCTTCAAAGATTCGTGAATGGAACAAAGCAGATGTGGTGCTATATG
AACATTTCAATGCAACATTCTGGAGGAAAGTTAAAGACTATGGACCGact
tttaaagaagatttaaaAGAATTACGTCATTATATTCATGAATGGTCGAA
ACGTTGTGATCGTCAAGAAGTCGTTAAAGGCAAAGATGCAAGTGCTGTCA
GATTTTATAAAGTTGGACACAAAGCCAAGCCAGAACACCGAGAAATGTGT
CAACGGTTTTTTCGTAAAGAGCTAGAATACATTCAAGAGTTTAGGATGag
ttattttaaagaatttcacGATAAAATGcaaatatataataaatttaAAA
GGTCCCCTACCTAAATGGCGCGCTGGATTAGAAGAAAAACGGCAAATAGT
AAAAAGAAgtacaaacacaaaacaaatacACCGAATATCTTTCCATGGAT
TTTGTTATTAATCCTGATTGGATGGACCCTTTGggCCATTTGGCATTTCT
CAAGAAGTGTCATTGTGCCATCTTTGATCAAACGAGTGACTCCTCgaaaa
gagaagagtttccaggaagattttaaagaagaaaacgaagaagaagccTT
AATGATGATCGatgaagatgaaatttttcgaaaagaaatgGATCTTATCT
CAGGCTCAACTTGCAAAAATGGACCTTCGGGTGTACTACTTTTAAAAACG
CATAAAACAGGAAGTAGTACACTGGCTAATATACTCAACCGTTATGCTGA
TCAAAACAATCTACTGATGGCCATCCCTCATCGCAATTCGCGATTTGATT
GGCCGCACATGTTTAATGTGAAATCAGTTGATCAGAAGTTAATGAACAAT
AGACGAGCACAAGTTTTAACCAATCATGCGAGgctcAATCGCGTCGCAAT
GGACGAAGTCATGGTGCCGCGAACCCTCTACATCAGCATTTTACGAGACC
CGGTCAAGCAATTTGAAAGTTCTTTCTATTACCTAGAAATGCATACATTT
TTCGGTCTAAAATTCTCCGAAAACCCATTACAAGACTTTATGCAAGACCC
CAATAAACAcatgaataaattaaaaagccggcaaaaacctgaaaattatg
GATTATTTAGAGACGGTATGTTATTCGATCTGGGTTATGATCAATTAGAG
CTGAAAAGAATTGGTGTACGAAAGGCAATAGAAATtctagaaaaagaaat
aaatctaTTCCTTATTTTGGAATACTTCGATGAAAGTTTATTACTGCTGA
AAAAAGCAATGTGCTGGTCATTGGAAAATATCTtatatttcaaacaaaat
caacGTACCACAAAAATCCCAATTAACACTGCAACAGCTTCAAAGATTCG
TGAATGGAACAAAGCAGATGTGGTGCTATATGAACATTTCAATGCAACAT
TCTGGAGGAAAGTTAAAGACTATGGACCGacttttaaagaagatttaaaA
GAATTACGTCATTATATTCATGAATGGTCGAAACGTTGTGATCGTCAAGA
AGTCGTTAAAGGCAAAGATGCAAGTGCTGTCAGATTTTATAAAGTTGGAC
ACAAAGCCAAGCCAGAACACCGAGAAATGTGTCAACGGTTTTTTCGTAAA
GAGCTAGAATACATTCAAGAGTTTAGGATGagttattttaaagaatttca
cGATAAAATGcaaatatataataaatttaAAAGGTCCCCTACCTAAATGG
CGCGCTGGATTAGAAGAAAAACGGCAAATAGTAAAAAGAAgtacaaacac
aaaacaaatacACCGAATATCTTTCCATGGATTTTGTTATTAATCCTGAT
TGGATGGACCCTTTGggCCATTTGGCATTTCTCAAGAAGTGTCATTGTGC
CATCTTTGATCAAACGAGTGACTCCTCgaaaagagaagagtttccaggaa
gattttaaagaagaaaacgaagaagaagccTTAATGATGATCGatgaaga
tgaaatttttcgaaaagaaatgGATCTTATCTCAGGCTCAACTTGCAAAA
ATGGACCTTCGGGTGTACTACTTTTAAAAACGCATAAAACAGGAAGTAGT
ACACTGGCTAATATACTCAACCGTTATGCTGATCAAAACAATCTACTGAT
GGCCATCCCTCATCGCAATTCGCGATTTGATTGGCCGCACATGTTTAATG
TGAAATCAGTTGATCAGAAGTTAATGAACAATAGACGAGCACAAGTTTTA
ACCAATCATGCGAGgctcAATCGCGTCGCAATGGACGAAGTCATGGTGCC
GCGAACCCTCTACATCAGCATTTTACGAGACCCGGTCAAGCAATTTGAAA
GTTCTTTCTATTACCTAGAAATGCATACATTTTTCGGTCTAAAATTCTCC
GAAAACCCATTACAAGACTTTATGCAAGACCCCAATAAACAcatgaataa
attaaaaagccggcaaaaacctgaaaattatgGATTATTTAGAGACGGTA
TGTTATTCGATCTGGGTTATGATCAATTAGAGCTGAAAAGAATTGGTGTA
CGAAAGGCAATAGAAATtctagaaaaagaaataaatctaTTCCTTATTTT
GGAATACTTCGATGAAAGTTTATTACTGCTGAAAAAAGCAATGTGCTGGT
CATTGGAAAATATCTtatatttcaaacaaaatcaacGTACCACAAAAATC
CCAATTAACACTGCAACAGCTTCAAAGATTCGTGAATGGAACAAAGCAGA
TGTGGTGCTATATGAACATTTCAATGCAACATTCTGGAGGAAAGTTAAAG
ACTATGGACCGacttttaaagaagatttaaaAGAATTACGTCATTATATT
CATGAATGGTCGAAACGTTGTGATCGTCAAGAAGTCGTTAAAGGCAAAGA
TGCAAGTGCTGTCAGATTTTATAAAGTTGGACACAAAGCCAAGCCAGAAC
ACCGAGAAATGTGTCAACGGTTTTTTCGTAAAGAGCTAGAATACATTCAA
GAGTTTAGGATGagttattttaaagaatttcacGATAAAATGcaaatata
taataaatttaAAAGGTCCCCTACCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:446776..451392 + |
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