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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:436761..439065+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12020.1.p1 ID=MSTRG.12020.1.p1|Name=MSTRG.12020.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2305bp|location=Sequence derived from alignment at sc0000089_pilon:436761..439065+ (Clytia hemisphaerica_ch_hm2_pilon)
caaaataacttttttttggcaaataaacgaaaatgaattttaaacttCAA
CTCTCTTTAAATTTCACTTCATAAAATGAAGTCGTGTGAAATGAGAATCG
TTTTGCTCTTGGTTTTTGTCATCTTCACAGAGGGTATGTTTTTCGATCAA
GTTTGGAAGGAAACTTTTAACTAACGAATTGAAACTTCAAGAGTAGAGGA
TTTGGCTCTGTGGAACACAAagtttgttcaaaaattttgacaagCCGTAA
ATTCAAAGATTGCTTTTGACGGaataaaatatcattaaccctttccggac
gaaCGTGCCAAGAGGTGGGCCATACTAGTGACCAAGCTTCAAAGCAATAA
ATATCGAGATCTAACCTTCCCAAGAGCCCGTTCAGCTACCGTTGGAAAGA
GTAGAAAATTAAAaggaaattctttttcaaaaaatgcatttctcttgtcc
ggaaagggttaaaaggGATGCTTCAAGTTTTCTAcaaattagaaaatgaa
gaaataaataaaagtttttttctctattgggtcagaaatttcattttata
cgTTTCCAGATCTGTTTgcattactttaatgggataaattttcgcgggga
ttaaatttcgcggttgagctcatccgcgaaattttaagatttcgcgggga
ttaattttcgcggatggcactattgggtgtcaatattttcacgattttgt
gactttcactgtcaaatcatacatgttggttgttaaaatacacattattt
gcgcctctttgatgcaagtaaccattcgaaaagtatttatttaatatatt
ttgagtttttttagaaatatttcgcggatgggcctttttcaaatttacaa
tgggacttattttcgcggatgacacccaaatccgcgaaatccgcgaaaat
taatccccgcgaaaatttatcccattaaagtagatcTTGCATAAGAATTG
GCAGTCCATACATTTGCAAACTTTGTAGAATTTtcttaaagtttgaaaat
gaagataaaaagagaagattttttctacttgaccaaaaatttttgttata
tATACCTTGCCGATTTCAtgtattcaaatatttttcatatctttatTAGG
TTGAAAAGTTACAACCTGTTGCAATAGAGGTccattttgacaatttttag
cAATTTATTGCCCAGTAGCAGCTTTTTCGGAGGGATGTAACTTTTAATTC
AGAAAAGATAATTGAAATCAGCGGGGCtcaaagttttagaaaattatttg
ctaaaagttttaaaatattttcattttccttcttcttcattttcaaattt
ttagaaatttcttcaaagCTCTGCATCAATctactcaaaattattttttc
agcaaggttagttaaatattttttcgatcTCACATTACTTGGAGATGTTT
AAAAATGTAGGGACTGCCAATCTTTTGGAACAGAATTAGAATTCATGTAC
TGTAGAAAATTCTTTAAGTAATGCTTGAAATTTCATTACAatttataaaa
cattttttcagcCTCATTACCATGCGGTCCATGTTCCCATGGCAATGATA
AGAGAGCAGTGTGTGGAAGTGACGGGAGGCGTTATTCGGATTTCTGTGCT
CTTCAAAAGGTTTCCTGTTTGAAAGGCATTCCGATCATGGCGGTCAAAGT
TGCAGCAGATGACGAGCTCTGTACAGGTATCTGTTAAGTTTTTCCTACAT
ATTATGCAGTTTGATTCGGAATTGCAgtgatcaaatttttcttttggagg
cttttaaattaattttgggGAAAGGGGTCGACGTTGCAACGAATTGAATT
TCCCACAAACTTTGGGCTCTCAAgtgttcaaaattcattgcatcTCAAAA
AAGCTAGAAAAATTCTACTCAGGATAAACTCGTACCCAGGGCctgattct
tatttttttataattttgatggtcTTAAGAATCGATATGAAAAGCAAATC
GTCATAAGGACGAGGTTGTACTAAAAAATGAGTCATGGAGTATATGCCTT
TTTCCTTTCGTTTTCTTCAGATTGTAACATCTACTGTGGCCCATCTCACC
AACCAGTTTGTGGGATCGATAATCGAACTTATATGAACGAATGCGTGTTG
AGATTCATGGCTTGTCGAAGCAGAAAAGCCATCTTTATTCGACATTATGG
AAGATGTATTTATACTAGTCCAAGAAGAAACTCataaacgacaaaaaaaa
ctGTTTCTCTTTTAACCTTTGGTATTGAAACGGTTCTAAATATTGTATGA
GCAAGAAACTGTATGAGGTTAGTCCATAATTTGAGGTAGATGATCCATCC
TTCCA Coding sequence (CDS) from alignment at sc0000089_pilon:436761..439065+ >MSTRG.12020.1.p1 ID=MSTRG.12020.1.p1|Name=MSTRG.12020.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1170bp|location=Sequence derived from alignment at sc0000089_pilon:436761..439065+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCGTGTGAAATGAGAATCGTTTTGCTCTTGGTTTTTGTCATCTT
CACAGAGGcCTCATTACCATGCGGTCCATGTTCCCATGGCAATGATAAGA
GAGCAGTGTGTGGAAGTGACGGGAGGCGTTATTCGGATTTCTGTGCTCTT
CAAAAGGTTTCCTGTTTGAAAGGCATTCCGATCATGGCGGTCAAAGTTGC
AGCAGATGACGAGCTCTGTACAGATTGTAACATCTACTGTGGCCCATCTC
ACCAACCAGTTTGTGGGATCGATAATCGAACTTATATGAACGAATGCGTG
TTGAGATTCATGGCTTGTCGAAGCAGAAAAGCCATCTTTATTCGACATTA
TGGAAGATGTATTTATACTAGTCCAAGAAGAAACTCataaATGAAGTCGT
GTGAAATGAGAATCGTTTTGCTCTTGGTTTTTGTCATCTTCACAGAGGcC
TCATTACCATGCGGTCCATGTTCCCATGGCAATGATAAGAGAGCAGTGTG
TGGAAGTGACGGGAGGCGTTATTCGGATTTCTGTGCTCTTCAAAAGGTTT
CCTGTTTGAAAGGCATTCCGATCATGGCGGTCAAAGTTGCAGCAGATGAC
GAGCTCTGTACAGATTGTAACATCTACTGTGGCCCATCTCACCAACCAGT
TTGTGGGATCGATAATCGAACTTATATGAACGAATGCGTGTTGAGATTCA
TGGCTTGTCGAAGCAGAAAAGCCATCTTTATTCGACATTATGGAAGATGT
ATTTATACTAGTCCAAGAAGAAACTCataaATGAAGTCGTGTGAAATGAG
AATCGTTTTGCTCTTGGTTTTTGTCATCTTCACAGAGGcCTCATTACCAT
GCGGTCCATGTTCCCATGGCAATGATAAGAGAGCAGTGTGTGGAAGTGAC
GGGAGGCGTTATTCGGATTTCTGTGCTCTTCAAAAGGTTTCCTGTTTGAA
AGGCATTCCGATCATGGCGGTCAAAGTTGCAGCAGATGACGAGCTCTGTA
CAGATTGTAACATCTACTGTGGCCCATCTCACCAACCAGTTTGTGGGATC
GATAATCGAACTTATATGAACGAATGCGTGTTGAGATTCATGGCTTGTCG
AAGCAGAAAAGCCATCTTTATTCGACATTATGGAAGATGTATTTATACTA
GTCCAAGAAGAAACTCataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:436761..439065 + |
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