MSTRG.11052.32.p2 (mRNA) -

Overview
NameMSTRG.11052.32.p2
Unique NameMSTRG.11052.32.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000079_pilon:196282..198949+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11052.32.p2 ID=MSTRG.11052.32.p2|Name=MSTRG.11052.32.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2668bp|location=Sequence derived from alignment at sc0000079_pilon:196282..198949+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCGATGTAGCTGGAGGTGTTCCGCTATGTATTGCTGAAGGTGGAGGAGG
TGGTCCACTGCATATTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTA
CTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGT
GGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTAC
TAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTG
GTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACT
GAACGAGGAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGG
TCCACTGCGTATTACTGAACGAGGAGGAGGTGGTCCACTGCGTATTACTG
AACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGT
CCACTGCGTATTACTGAACGAGGAGGAGGTGGTTCACTGCGTGTTACTGA
AGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTT
CACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAA
GGAGGAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCC
ACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAG
GAGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCA
CTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGG
AGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCAC
TGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGA
GGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACT
GCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAG
AAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTG
CGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGTGG
AGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGC
GTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAA
GGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCG
TATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAG
GTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGT
GTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGG
AGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTA
TTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGT
GGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGT
TACTAAAGGAGGAGGTGGTGGTCCACTGCGCATTACTGAACGAGAAGGAG
GTCGTTCACTGCGTGTTACTGAAGGTGGAGGAGGTGCTCCGCTGCGTGTT
ACTGAACGAGAAGGAAGTGGTCCACTGCGTTTTGCTGAAGGTGGAGGTGG
TGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTG
CTGAACGAGAAGGAGGTGGTCCACTGTGCATTGCTAAAGTTGGAGGAGGG
GGTGGTCCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCATTGCGTAT
TACTGAAGGAGGAGGAGGTGGTGGTCCACTGCGTATCGCTGAAGGAGAAA
GAGGTGGTGGTCCACTGCGTATTGCTGAACGAGAAGAAGCTGGTCCACTG
CGTATTACTGAAGGAGCAGGAGGTGGTGGTCCACAGTGTATTACTGAAGG
CGGAGGATGAGGTGGTTCATTGCGTTTTACTGAAGGAGGAGGTGGTGGGC
CATCGCGCATTACTGGAGGAGGAGGTGGTGGTTCACTCTGCATCGCTGAA
GGAGGAGGAGGTGGTGGTCGACTGCGTATTACTGAAGGAGGAGGAGGTGG
TCGACTTCTGCTTATTTCAGTTGATGGGCATTGAGGTGAATGAGGTCATA
ATGATTTTAACGAATATGTATCCTTGTAGAGGGTTGGAATTTGCAAACTT
CCACTGGGTGGTGTTTTGGTTGAAGGAATGAAATTGTCTGTCGGTGGTGA
TTGAGGTTATGATGTatgtgaattttctttgaatgccATGTGATCATAAG
TAAGAAACTACACATAGAACGTCTGTTTGTATATGTCAACTTAAAACAGT
TGCTTGATATTACATAGTAATTATTATAAAATCAAGCAAGACAAAATTGT
ATTACTAGTCCAGCTAGACACAACAACAAAATTAGTACGCAGCAAAACCA
AAACATACATAGCAGCAGTTCTAACCAACGTAAACACTCAAGTTTCACTT
TTAATAAAAACATGCATACGCAAGAAAttaaattatgtcaaaataataTG
CATTGGAGACAAAAAGAAAGGCTGTAGCTTTTGATAGAGCtcaaattaca
tgttttttttttctactc

Coding sequence (CDS) from alignment at sc0000079_pilon:196282..198949+

>MSTRG.11052.32.p2 ID=MSTRG.11052.32.p2|Name=MSTRG.11052.32.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4932bp|location=Sequence derived from alignment at sc0000079_pilon:196282..198949+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCGATGTAGCTGGAGGTGTTCCGCTATGTATTGCTGAAGGTGGAGGAGG
TGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTA
CTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAGGT
GGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTAC
TGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTG
GTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACT
AAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGG
TTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTG
AACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGT
CCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGA
AGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTT
CACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAA
CGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCC
ACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAG
GAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCA
CTGCGTGTTACTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACG
AGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCAC
TGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGA
GGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACT
GCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAG
AAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTG
CGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGG
AGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGC
GTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAGGAGGA
GGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCG
CATTACTGAACGAGAAGGAGGTCGTTCACTGCGTGTTACTGAAGGTGGAG
GAGGTGCTCCGCTGCGTGTTACTGAACGAGAAGGAAGTGGTCCACTGCGT
TTTGCTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGG
AGGTGGTTCACTGCGTGTTGCTGAACGAGAAGGAGGTGGTCCACTGTGCA
TTGCTAAAGTTGGAGGAGGGGGTGGTCCACTGCGTATTACTGAAGGAGGA
GGTGGTGGTCCATTGCGTATTACTGAAGGAGGAGGAGGTGGTGGTCCACT
GCGTATTGCTGAACGAGAAGAAGCTGGTCCACTGCGTATTACTGAAGGAG
CAGGAGGTGGTGGTCCACAGTGTATTACTGAAGGCGGAGGATGAGTCGAT
GTAGCTGGAGGTGTTCCGCTATGTATTGCTGAAGGTGGAGGAGGTGGTCC
ACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAG
GAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAGGTGGTTCA
CTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACG
AGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCAC
TGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTAAAGGA
GGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACT
GCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAG
AAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTG
CGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGG
AGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGC
GTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAA
GGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCG
TATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAG
GTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGT
GTTACTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGG
AGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTA
TTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGT
GGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGT
TACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAG
GTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATT
ACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGG
TGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTA
CTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGT
GGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGCATTAC
TGAACGAGAAGGAGGTCGTTCACTGCGTGTTACTGAAGGTGGAGGAGGTG
CTCCGCTGCGTGTTACTGAACGAGAAGGAAGTGGTCCACTGCGTTTTGCT
GAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGG
TTCACTGCGTGTTGCTGAACGAGAAGGAGGTGGTCCACTGTGCATTGCTA
AAGTTGGAGGAGGGGGTGGTCCACTGCGTATTACTGAAGGAGGAGGTGGT
GGTCCATTGCGTATTACTGAAGGAGGAGGAGGTGGTGGTCCACTGCGTAT
TGCTGAACGAGAAGAAGCTGGTCCACTGCGTATTACTGAAGGAGCAGGAG
GTGGTGGTCCACAGTGTATTACTGAAGGCGGAGGATGAGTCGATGTAGCT
GGAGGTGTTCCGCTATGTATTGCTGAAGGTGGAGGAGGTGGTCCACTGCG
TATTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAG
GTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAGGTGGTTCACTGCGT
GTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGG
AGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTA
TTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGT
GGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTAT
TACTGAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAG
GTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATT
ACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGG
TGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTA
CTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGT
GGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTAC
TGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTG
GTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACT
GAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGG
TTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTG
AACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGT
CCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGA
AGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTT
CACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAA
CGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCC
ACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAG
GAGGAGGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCA
CTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGCATTACTGAACG
AGAAGGAGGTCGTTCACTGCGTGTTACTGAAGGTGGAGGAGGTGCTCCGC
TGCGTGTTACTGAACGAGAAGGAAGTGGTCCACTGCGTTTTGCTGAAGGT
GGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACT
GCGTGTTGCTGAACGAGAAGGAGGTGGTCCACTGTGCATTGCTAAAGTTG
GAGGAGGGGGTGGTCCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCA
TTGCGTATTACTGAAGGAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGA
ACGAGAAGAAGCTGGTCCACTGCGTATTACTGAAGGAGCAGGAGGTGGTG
GTCCACAGTGTATTACTGAAGGCGGAGGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11052MSTRG.11052Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11052.32.p2.exon1MSTRG.11052.32.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11052.32.p2.exon2MSTRG.11052.32.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11052.32.p2.exon3MSTRG.11052.32.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11052.32.p2MSTRG.11052.32.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079_pilongenomesc0000079_pilon:196282..198949 +