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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000077_pilon:475595..478977- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10871.1.p1 ID=MSTRG.10871.1.p1|Name=MSTRG.10871.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3383bp|location=Sequence derived from alignment at sc0000077_pilon:475595..478977- (Clytia hemisphaerica_ch_hm2_pilon)
GATGCTCTACCAAATGGTTTGATTGAACTAATTGATGAATCGATCAAATG
AACCATCATGCAATGCTTCAAGGGTTGTCTAGATAGAAATCTCCCTCCCA
ATCGCTCATTTCAGCATGCTGTCAAAAGAAATCGTTTCCATCATATCTTA
ACGTTAGTGAGCCTTTCAAAAATTTGATTGCTCTCTATTGATCATTACAA
AACCCCCGTCTTTTAATGAATCTTATATTCACTTAAACCCTTTTGAATGA
TAAGTCTTATGTTTGAAAAACCTTAAACCCTATCAGTTGACCAATCAGAA
TAAATATAAAAATCAGAGAAAGAAATTTTATAGTTAAACCCTAAAGCTAT
CTCTATCTATTCTTTGTTTTAAAGGTGAAACTTTTAACTGTAGGTCATCG
AGACAATTCAGCAATTGTTTTTAATTGTTCATTAAGAACTCATCTTCTTA
TCGTTGGGGTTCAAGAATTCTTTTATTCTGTTTATTATTCTATTGTGTGT
TGATAACAATAGAGTGAATACCAGCTTGATTAATTGCTATTCATATCTCT
CTAGTTGACCTTCAAGATCAAAGGATATCAACTCGTGAAAATTGTTTTAA
AAGAAGACGCACACTTGATGATGGTAAGTTTTCATCGTGTATCTATTGAT
GAAGAGCTAGAGTGATTTCAAAGAAAAGATCTGGCGGTCTACAGATACAG
AATTATTGGGTTATTTTCCTTTTTCATTTGAACATTGGAAGGTTTTGAAG
ACGAATTAGACGGTGACATAATCTCCAATTGGCTGTATTGACCTTCAAGA
ACGAGAACTTCCCAATACGCTAGTAAGGAAAACTTATTGGAATACTTCTG
GTAAATTGTAGCTCAGTATGGATAGTCCTACACGCGATTCACCAACGACC
GACAAACGTCACTCGACGTCTCCCGTTACACGTCACTCCACGTCTCCCGT
CAACAGTCCATCTCCTCCGTTAGAACGTCAGAAGAAACCGTTCTCGATTG
ACTATTTACTCAATTTCTCACCGACAAAGAAAACCACCCTCATCCGTCAA
TCACCACCTGTTGAATACATCCAACCGCCCTTCCACACTCGGCCTTCACA
CTTTATTAATGACCGGTTAAAGGAGCCGGAAGATGAAGCTAAAGTACCAT
CACCGACTTTATTGACTAACACCTCCAGGAAGAGAGATCTTGATCCCACC
ATAGGTATGCAGCTTGTTCATTTCTTTGGATTCACATATAATATCTGGTC
TCCTTTACTGAGCAGTAACAAAAATTTACTGATCGATCAATGCCTCTTTG
AACCAATTGGATTGAATTCACGCTGTTTTAGTCCACGGTGGGGGTACTTA
AGCAACAATGGGTGCTGGGTATGTGCGGACGGTAAGGGTCGGGTTTTTCA
CCTTTCAAAGTCTCTAAGAGTCGCAAAAATCAGAAATATTTAAATTAGTC
TCTTTAAGGGTCGGAACATTCACAATTTCTAGGAAAGTTTTTTGATTTAG
AGTGGAAAAATTGTAAAAAAGTCTCTCTAAGGGTAGGGAATTTTTCAGAA
ATTGAAGAAAATTAAGCATTAAAGTAAACGATTTTGATGTGTATATAAGA
AACTTCCTTGGGCATCTATTAGAAAATCTCAGACCGTTTTCATGTTGAAT
TCTTTTCCATCAATTTAAGGCGGTTTTCACAATCCTTCAAGAAATTAATT
AATTTGTTTAATTGATTGAGGTCAATAAATTGGCAATAAAATGTCGAAAT
ATCTAGCCTATATAGTAGTTAACTTGGTTAAGCTGACGTGTCTAGATATC
TTTAGAAATCGACAGTATCTAAAGCTTTCAGTGAAGGTGGAGATTAATCT
AAACTTTCTTTGAATATCCCTGAACACTCTTTTCTAAAATTTCCGGACAA
GAATGTGGTTTTATCTTGTGTAATTTGGCTCCCCATTGAAGTCAATCAGT
CATTTAGGTGACAACTGGTGACGTTGCACTACGCGCCAACTCAAGGCGTG
ATTTTAAACGATTAATAAAATTAAAACCCCTACTTTGTAATAAATTAAGG
TTCTTAAAAATTTTAAGATGGCTCGTAATTGTTGCGTTAATATTTCAATG
TCTTTTTCCGCTCGTGAAACTTTTGTCTACGCATTTCTAATTGTCATGTT
AAACTTTTAAAGCTTAATTAATTTGAAGCTTACAAATTACAAAATTAAGT
CTCGACTTTTAAACCTTACGAAGCCTTGACCTTGGAGCCTTGGCCTACAA
CTTTTTTATAAGAACATCCACAATTTTTAAATATGCAGGGAGCTTAAACC
TGAAAGCCTAAGCTGAACAAGCTTTGAACTTATCACTTGCACATGATAAT
AAACCAATTATAGTTAATGAGTAATTGATCACATAAATTACCTAGTTGGC
GACACGAAATTTTTATCATGTTTTAAAACTCAAATTTTGTCATTTTGTGA
TAGTGGTATAGCTCCTCCTCAAACTTGTTTCTTCTCACTTAATTTGCGTT
TTATCATTTGATTGGTTAATTGCTCTGACTTAATTTGTTTATGATCATGT
CATGTATGCCATTTTTACTGCTAATTATCATATCCCTTAATTAGCTGACT
TGAAATGAGGTTTGTCATCTTGTCACAGACCCCTATACTAAATACTAAAA
AGATGGCGAAAGTAAAAACATTTTTAGGCTTGAAACTCAAAAAGTTAAGA
ACATCCCAAGGCTTCAAAAATCTTGGATGTTCTTGCAAAAAAAACGTGTA
ACCAGTAGCGGAGCTTTCTTTGAACTTCGATGCCATTATAACGCTCCTAC
TTTTTCATTACAGAATTCCAATGGGATTTGAGCAAATGTTTCCTACGAAA
ACACAAGGCCAATCGTAAACCACGAACGCCCTTCTCCGCCAGTCAACTTC
TCACCTTGGAACAGAAATTTAAACGTAAACAATATTTATCAATAAACGAG
CGATCAGAATTAAGCGCTCAACTGAACTTAACTGAAACACAAATCAAAAT
TTGGTTTCAAAATCGTCGAGCGAAAGAAAAACGTCTTAAAGAAGCGGAAC
TCGAGAAAACCGTAAGAACATTTTCACCGGGAAGTGTAACATCACCAAAC
TATTCACCGTGCAGCTGTTGTTATTCGGGCTCTTCCGTATTCAACTATCC
ACCTGTATCGTGCTCTCGGATATCCCGTTTTATGCATTAGTTGAAAATTC
ATGTGGGGATGTCTGTTTTGCCTGTTGTTGTATATATCTTTAATTTCTAA
GATTTTAATTTTGTTAATATTTTGTAAGGTGGCCTCATGTAAGGTTCGTG
ATCGACAACCGCTTTTCACAGACCCGCTAGGGTTTTTTCAGCCAGCGGGG
TAAAAATAACGGACCAAATTCTCGATGAGGATT Coding sequence (CDS) from alignment at sc0000077_pilon:475595..478977- >MSTRG.10871.1.p1 ID=MSTRG.10871.1.p1|Name=MSTRG.10871.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1428bp|location=Sequence derived from alignment at sc0000077_pilon:475595..478977- (Clytia hemisphaerica_ch_hm2_pilon)
AATTCCAATGGGATTTGAGCAAATGTTTCCTACGAAAACACAAGGCCAAT
CGTAAACCACGAACGCCCTTCTCCGCCAGTCAACTTCTCACCTTGGAACA
GAAATTTAAACGTAAACAATATTTATCAATAAACGAGCGATCAGAATTAA
GCGCTCAACTGAACTTAACTGAAACACAAATCAAAATTTGGTTTCAAAAT
CGTCGAGCGAAAGAAAAACGTCTTAAAGAAGCGGAACTCGAGAAAACCGT
AAGAACATTTTCACCGGGAAGTGTAACATCACCAAACTATTCACCGTGCA
GCTGTTGTTATTCGGGCTCTTCCGTATTCAACTATCCACCTGTATCGTGC
TCTCGGATATCCCGTTTTATGCATTAGATGGATAGTCCTACACGCGATTC
ACCAACGACCGACAAACGTCACTCGACGTCTCCCGTTACACGTCACTCCA
CGTCTCCCGTCAACAGTCCATCTCCTCCGTTAGAACGTCAGAAGAAACCG
TTCTCGATTGACTATTTACTCAATTTCTCACCGACAAAGAAAACCACCCT
CATCCGTCAATCACCACCTGTTGAATACATCCAACCGCCCTTCCACACTC
GGCCTTCACACTTTATTAATGACCGGTTAAAGGAGCCGGAAGATGAAGCT
AAAGTACCATCACCGACTTTATTGACTAACACCTCCAGGAAGAGAGATCT
TGATCCCACCATAGAATTCCAATGGGATTTGAGCAAATGTTTCCTACGAA
AACACAAGGCCAATCGTAAACCACGAACGCCCTTCTCCGCCAGTCAACTT
CTCACCTTGGAACAGAAATTTAAACGTAAACAATATTTATCAATAAACGA
GCGATCAGAATTAAGCGCTCAACTGAACTTAACTGAAACACAAATCAAAA
TTTGGTTTCAAAATCGTCGAGCGAAAGAAAAACGTCTTAAAGAAGCGGAA
CTCGAGAAAACCGTAAGAACATTTTCACCGGGAAGTGTAACATCACCAAA
CTATTCACCGTGCAGCTGTTGTTATTCGGGCTCTTCCGTATTCAACTATC
CACCTGTATCGTGCTCTCGGATATCCCGTTTTATGCATTAGATGGATAGT
CCTACACGCGATTCACCAACGACCGACAAACGTCACTCGACGTCTCCCGT
TACACGTCACTCCACGTCTCCCGTCAACAGTCCATCTCCTCCGTTAGAAC
GTCAGAAGAAACCGTTCTCGATTGACTATTTACTCAATTTCTCACCGACA
AAGAAAACCACCCTCATCCGTCAATCACCACCTGTTGAATACATCCAACC
GCCCTTCCACACTCGGCCTTCACACTTTATTAATGACCGGTTAAAGGAGC
CGGAAGATGAAGCTAAAGTACCATCACCGACTTTATTGACTAACACCTCC
AGGAAGAGAGATCTTGATCCCACCATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000077_pilon | genome | sc0000077_pilon:475595..478977 - |
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