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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:255652..263965- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11548.6.p3 ID=MSTRG.11548.6.p3|Name=MSTRG.11548.6.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8314bp|location=Sequence derived from alignment at sc0000084_pilon:255652..263965- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCCATTCCAGCCGCGGCTTTCTTATACTATGTTGGTATCGAGCACTTT
TGTTTTTATCTGTTCACCCACACAATTGATATCAAATTGGATTATCATTT
TAGATATCTAGCAATTTTTAGAACATTTGAACAACTTACAGGAAAGGCAG
AATGGACGAGAGTAAAGACATACAAGAATATCATAGCGAGCCATTGGAGA
GCAAATTCATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTGCAT
TACGCTCGACCCTCCGATGTTTTTATACCAAAAGGTTATTTTAAAAACAT
TGAAAATATCAAAAATTTCGAGTTTTTTGAAGATGATACAGTTATATGTG
GATTTCTTAAAACAGGTAGCGTTAGTATTAAACGTTTTTTTTTTTTTGTA
CATGTGTATATTTTGCATTGATATTTCCATTTTTTTATACCTTCTGGACG
TGGGTTTCACCCCTTGACAATATAATCTTATACCTCATTTTTACAGTGTT
TTTGTTCGTGAAGAGTCATTTTTCGCTAATTTCGATCATTCACACGAAAA
ATAAAAATCCGATATCTGGCGAAAATCTCAAGGGGAAATGAAAAAAATCG
AAAAAAAAGATACTGACTGAGCGGTTTAGACCAAGAAAAACTTTGAAGTC
TTATTTTGAGAAAATTTATCGGCTTAAGGTACTCTGAAGCTGTCGAGTTG
TCGAGGTAGGAAATTATGTAAGTTCAGGTTCTCGTTTTGAAGTTCACACT
AATTAGACAGTTGTCGATGAAAGACTTGAACCTGGAGACTCTCTATAGAA
ACATTAATGTAATGATGTTTTATCGATAATTTTTAGGTACGAATTGGTGC
GAAAGGATTGTTTGGGCACTCCGTAATGATATCAAATTGAACATTCAACA
CGCACCCCCTGTATCAGTTTTCGGGTAAGTGAGTGTGTTGCATGTACCAG
ACGACCACGGTTTTTCCCTCGACACCGAGTAATCAAAAAGTCGCGTGTTG
GGATAGAGAAAGGTTAGTGAATGTACCAAAGTATGTAGCCCAATCGGCGG
TAAATTTTGTCTCTGGTGGGAAAAACACCCTACAATTTCCGCCCTACTGG
AAACTTTTGCGTATTCTAACGTTTTTCAGAATTTAAAGATGGGGAGAAAA
TTGCAGTTTGCAGGCTTCCAGGCTTTATTCTCAGCTTTATTGGGACATTT
TTGAGCTTTTAGATCCTAATATCCTCAGGTCCTAAGTCTAATGATTCGGA
GTTGAAACTCTACTTTCCAACCGTACTTAAAAAAGCACTTAAAAATCACT
TGCGGATTTCAAATTTGAGGGAATTCCCCTTTTGTGTCAAATATTACGGT
GGGGATTGTGGGGGAGCAAGCAAACTAAAACATCTTTCAATATCACAGCA
TGGTTATGGGTATAGGAGATTCCGATAGTGACAACAACAAAGCTAACGAT
GAGATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGAATCTTAC
ATATGAATTATTACCAAGACAATTTCAACAAAAGCAACCTAAGGTATTTA
TAAATACTCTTTCTCACCTGAAAACATCAATAGAACCTGATAGAGCCATA
TTTTATAATAAGGCTAAAATAAGATGATGTTGGAAATTTTCATACTTAAC
AAAATATAGCAAACAAAATAGATCAATAGACGATATATTGGCCTCACATG
AAAACTCAGATTTGGCCCCCGAAAATTCTCCACGATGCTTTGTGCGGAAA
AATTTCACCATGAACTTTTTCCGCGCAAAGCATTGTAGGCAATTTTCGTC
AAATCATTTCTACCTCCATGGTCAAATATGAGTTTTCACGTTAAGCCAAT
ATATCGTCTATTGATCTATTTTGTTTGCTATATTTTGTCAGGTATGAAAA
TTTCCAACATTGCCTTATTTTAGCCTTATTTCATTTGGTTACGTAGAAAC
CATCAATCGATAGAATCTAAAAATTATATCGTCTATATTACTAGGCTAAT
CAAATTATATTCAATACCAAGGAATAAATTCACTCAATCAATTTAAGAAT
TTCCGTAGATAACGGGACTGTTTACATACAAGTCCGATTACAGAAACCCA
ATTATTTGCCCTCCTCCTCCCTCCTCCCTTCAATATTTCATTACAAATCA
TCGGAAAACATTTTTTTTATATCACAATAGATGATTTACATGGTTCGAAA
CCCAAGAGATGTTTGCCAATCCCTTCACAGTCACTTCTATACACTTCACG
ATGGCTTTCCCTGGATCTTTACAAGATGTTGTTAATCTCATGACCGACGA
TGCTGGATATTATTCTGGTCCGTTTTTTAAACATGTTTTGGGATACTGGA
AACGACGCTCTTATGAAAATATACTCATCATCTTTTACGAAGAAATGAAA
AAAGATTTATCAGGTCATATCAAGAAGATTGCTGATTTCTTAGACATTGA
AATTTCAGATGAGGAAGTGTCAAATCTGGCCAAACATTTTTCCTTTGATT
CGATGAAACAAAAAGCAGAGCAGATGATTCCCTTCCATGCAAAGCAGGTC
AGTGTGGAACGATTTTTTAAAATCTTTGCTCAAATTTCAGATGGAAAAAC
CATTTAGAACAATCAAATCCTGATTTAGTCAGTATAATAAGGTGAAGCAG
TGAGTAGATACCCACCCTCGTTTTCATGTAGAAGGTTACGTTTCGATACC
TATACAGTGCAATAAGTGGTTTGACCAGTGAATACCCCTTAATCCTATTT
ATACCGACATCCGACATTTCTCCAGTTTCATATTACCAGTGTCATATTTT
TCAGGAAGGTCATAGTGCAACAGTCGCAGCAGCTCACAAAGGAAAAACGA
TGTTTAACAAGGGACAAGCTGGATCGTGGAAGGCTCTGTTTACACCAGAG
ATGACAAAACAAATGGAAGAATGGGAATCAAAATGGTTGAGAGATTCTGA
TCTCAAATTGATTTATGAATAGTATTGGAGTATTGAAACATGTAAAATAA
GAGTTAGATAGAATTTTGAAACGAGTAAAATGGATTTTCTTACATAAAAA
GTATACGTGTGATAGAAATTCCATTTCCCATTTCTGATTCCGTTTAATCC
AAACAATGAAAATCAAGTGCACAAACTCTTTTTGTTGAAATAATCTGATT
AATTTGTATATTTCTAACAGAACAATATTTCAAGAATGAAAAAACAATAA
AAGTTTACTCGATATATTTTGACAGAATTTTGCGGCGATTAAATATTTTG
CGGATAAGGTCTTTCCAAATTTCCATTGGGACTTCCGTGAAATTTAATCT
CAGCGAAATTTTATACCATTAAAGTATTGAGCTTCGCAGGTTTTTCAAAA
CAGGTTTTTCCTTTTTTAATAGCGTTTTTTGGACAAAAATGTCCTTCTTC
TGCCAAATTAAATTATCCTGCCAAACTTAAATTCTCTATGAAAATTTTTT
TTCGGGCATATCCGCCAATAAAATAAACTAGCCGCTACCCGGCGTTGCAC
GCCGGTTAAGCTGTAGCCGAACGCACTAAATAAAAGTGCGAAATCTCTAC
AACGTTTGACTCTAACCCTCCCTGGGTGTCTTATCTTTTAACCATATTTG
GATCACCAGTGTACTGTCCCCCGTGACATATATTTTTTTATTTAAGTCAA
AAGTTATCAGAAAGAGCATCGTTTACTGTACCAGTTTCGTTTGAAACGAC
TCTGCAGGTAGTTATTTTACTCGCTTCACTCGCGTTAAATATGCCGTCCA
GTTGAAATGACAATTCTTCAGGAAAAAGTGGGAAAGTCGCAAAGAATCGA
AAGAATAATTCAGCCCTTTGTTTTTATCAGATCGAAAAAAATTAGACGAT
TCTAAATTGTTTATTTTAAACAGTTGTTATAACTTTTCGAATTTAAAACA
TGTAAAATGACGTACACAGGGGGGGTTTCAGGGGTCTTAAATACCGTCAT
ACCGACAAAAAATTTGGGTCAAATACCGTAATACCGTCGATAAAAGAAGC
CTAATTACCTAAATACCGATACCGGTAGAAAATGAAATACCGTTATCCCG
TCGTTTTGTTCTTGTAATACCGATTTATCGGGGGAAAAACGGCCCAATAC
CGTCGTACCGTAAAAGTGAACCCCCCCCCCTACGCACTTTTTAACAGTAA
CCACGACTTGAATGTTATTATAGGAAGAAAGAGGTGAACAAATATTTTCT
TATGTTTTATATCGCCCTTTGAATGTTGTTATTGTCCCAAATTTTTTTTT
GCTTTTTATGTTTTGATTTACATTTGAAATGTTCTTTTTTATGAAATGAA
ATCGTTTTGTTTTGAAAAGAATCCGAATGTCATTAAATAAATACGATCGT
CAAATACATTCGAAAACATTTAAAACAAAAGAAGAGAGAAAAAGGCAAGC
CTGGGCAGAAATAAAAATTACTTAATGTAGACGGGCCTTAAATTTTAAAA
CAAAGGCTGAATAAAGTCTAAACCAGGCTCTATCCAATCTGTCAATCACA
GGGAGTAAGGACCATTGAGTTTCAAGCCGAAGGCTAGAGGTCAATCTCCT
TGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTGAGC
GACCCGCCTGGTTTTCACACAAATGACAGATTGAAACTAAAATTTACCGC
TTAATTTTGAAAAATATATCACTCGAAAACAAAGGAATTGCTAGATTCAA
TCCGTCATCAAAAATACGGCGCATATTTTAAGGCTTCAATTTTTCTTGCC
TGAGAACGGTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACTCAATG
GTAAGGACCTTTCTTGCAATTCTATTTTATAATACTGCGCATGCGTAATT
TTCAACCGGTAGTGGATAAATGGCTAGAACCAACTCAAATAATTCGGGAG
AGGTGGACTCACTTTTTCGGTCGGGGTTGTGGAGGGCCAAATTAATTTTT
TTGATTAAACTGGAATGTGACGTTCTTTAGTGACGTTCTTTAGTGACGTA
TTTGTCGCTTATTGGGTCACTACCAGTTAGGGTCAAGGTTAGACTCGAGA
GTCACAACTGAGTGCCCTGGACCCATTTAGAGTCACTTTAGGGTCAATTG
GACCCACTGACAAAATTGACAGACTTCGTTTTTGTAAGATTTTAGATTGC
TGCGAATCTTCCCCTCACATAACTAGCTAACTTTATTTCATTTGGTTACG
TAGAAACCATTGATCGATAGAATCTAAAAATTTCACAATCAATCGAAAAA
AATGACGATATTAAAATGAATTAATTTGATAGATAAAATAATAGATAGTT
ATTAAAGATCTAACATAATCGGATTATCATTTATTATATGTCTTGCAATT
TTTTGAATATTTTAACAACTTACAGGAAAGGCAGAATGGACGAGGGTAAA
GACATACAAGAATATCATAGCGAGCCATTGGAGAGCAAATTCATGACTCC
CTTTGCCAACATACCTTACGTTTCTAATGTACATTACGCTCGGCCTTCAG
ATGTTTTTATACCGAAAGGTTATTTTCAAAACATTGCAGAAATTAAAAAT
TTCGAATTTTTTGAAGATGATACAGTTATATGTGGATTTCTTAAAACAGG
TAGCGTTAGTATTGAACTTTTTTTTTTGTTTGTACATGTGTATATTGAGC
ATCGATATTTCGATTTTTCTATACCCTTCTGGACGTGTGTTTCACCTCTT
GACAATATAATCTTCTACCCCATTTGTACAGTGTTATTGTTTGTGGAGAG
TCATTTTTCCTGAGCGATTTAGACCAAGAAAAACTTTGAAGTCTTATTTT
GAGAAAATTTATTCGCTTAAGGTACTCTGAAGCTCTCGAGCTGTCAAGCT
GTAGAGGTAGGAAATTTTATACTTTCAGGTTTTGGTACTTAAGTTCAGAC
TAGTTAGACAGTTTTGGATGAAAGACTTGAATCTAGAGACTCTCTATAGA
AACGTTAATGTAATGATGTTTTATCGATGATTTTAGGTACGAATTGGTGC
GAACGGATTGTTTGGGCACTCCGTAATGATATCAAGTTGAACATTCAACA
CGCACCCCCTGTATCAGTTTTTGGGTAAGTGAATGTATTACCTGTACCTG
ACGACCACGGCTTTTTCCTCGACACCGTTCAAAACAGAGTGATAAAAAAT
CGCGTGTTGGGATAGAACGCGGGCATTTTTTTCCGCTTTATCCCACTAAA
ACGGTCCCAATCTTTTTCTCGCAGAAATAGACAAAAGATGATACGTCATG
CGTCAAAAAAGGATTGGGATGAGATAAAACTGACAAAAAATGATCGCGCG
ACTACGGTCAAAAAGGTGTATCAGCGACGTATCGATACGCCATTGTCTCC
AGTGGGAAAAACGTCCTTCAATTTCCACCCTACTGGAAAATTTTGCGTAT
TTTAACGTTTTTCAGAAATTAAATATCGGGAGAAAATTGTAGTTTCAGTA
CTTCCACTTTGTTTCATTGGATTTTTTGATTTGTGAGGGGTTAAATGGCT
TCCAGGCTTTATTTAAAACTTAGAGTTAAAACTCTACTTTCCAACCGTAC
TTTAAAGCACTTAAAAATAAATTACGGTTTTCAAATTTGAGGGAATTCTC
CTTTTGAGCTAAATATTACGGCGGGGATTGTGGGGGAGCAAGAAAACTAA
AACAACGGTCCCCCTGTTTTGTTATCCCCATCTAAGATGAACAAAATATT
TGAAACAGAAAATAGTAATAGAAGACAAAGGAGATGTTTTAAATAGTTGC
CACTCTCTCATTCGTGTTCAAGAAGTCAAGAATATTTGCTTCAAATAAGA
GAAATATTTGAATTAGAGAGAACTTTCCACCAGAGGGAACCAATGGTTTA
GTTCTGATTACAGATAAATTCGAATTAAAAAGGTTTGAATTAAAAAAATA
TGACAATAGGAAAATATTAGATAGAGAGTTGCCCTGGTTTGGGAAAATTT
CGTAATCCAAACAAAACTTTTCAGATGTTTAAAAGTTACTCAAACATCAA
GCACTGTCTCGACTGTCTTACCAAAGAATTATCATCTTTCAATATCACAG
CATTGTTATGGGTATAGGAGATTTCGATACTGACAACAACAAAGCTAACG
ATGAGATTTTTTCGTCGATGAAGCGACCACGTGTTATCAAAATGCATCTT
TCATATGAATTATTACCAAGACAATTTCAACAAAAGCAACCTAAGGTATT
TGTACTCTTTTTCACCTGCAAACATCAATAGAATCTGATAAAGCAATTTC
AAAATAAGGCTAAAATAGGGCGATGTTGAAAACTTTCATACGTGGTTTGG
TAATACATAGCAAACAAAATAGATAAATTACAAGGCTAGTCAAATTATAC
TCACTACCTGAGTACACGTTTATCGTTTCATAGTACTCTACGAAAAATCA
ATTAAAAAATTTTCTGTAGATAACGGGACTGTTTACATACAAGTCAGATT
ACAGAAACCCAAAAATTCGACGTAAATTAACGAAAGCATTTTTCCATAGT
GACCGTAGTACAGTGGTAGAGCATCCGGCTACGGTTCGCAAGGTTGTGGG
TTCAACCCCCAGCTGGGTCATACCAAAGATTCTCAAAGTGGTACTTGATG
CCTCTTTGCTTGATGCTCAGCAATAGACGATATCTGATTTAGATAAATGC
AATGCATTCTGGTTTCTAGGGACTCTCAAAGGAATTATAATAGATCAATT
ATAATAGATTATAATTCCTTTGAGAGTCCCTAGAAACCAGAATGCATTGC
ATTTATCTAAATCCGATATCGTCTATTAAGAGAACGATCCAGGGAGAAAG
AGTGGCACCCTCCTCTACCTTCAGGGAGTTAGTTATCGAAATAGGAGCCT
TCTGGACGCCTCCGACTGCAGTCGACTTACTTACTTTTTTCTTTCTTTAT
ATCACAATAGATGATTTACATGCTTCGAAACCCAAGAGATGTTTGCCAAT
CACTTCACAGTCACTTCTATACACTCCAAGATGGCTTTTCTGGATCTTTA
CAAGATGTTGTTAATCTCATGACCGATGATGCTGGATTCTATTCTGGTCC
GTTTTTTAAACATGTTTTGGGATACTGGAAACGACGCTCTTATGAAAATA
TACTCATCATTTTTTACGAAGAAATGAAAAAAGATTTATCCGGTCATATT
AAGAAGATTGCTGATTTCTTAGACATTGAAATTTCAGATGAAGAAGTTTC
AAATCTGGCCAAACATTTTTCCTTTGATTCGATGAAACGAAAAGCAGAGC
AAATGATTCCCTTCCATGCAAAGCAGGTCAGTGTGAAACGATTTTTTCAA
AATCTTTGCTGAAG Coding sequence (CDS) from alignment at sc0000084_pilon:255652..263965- >MSTRG.11548.6.p3 ID=MSTRG.11548.6.p3|Name=MSTRG.11548.6.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=918bp|location=Sequence derived from alignment at sc0000084_pilon:255652..263965- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTACGAATTGGTGCGAAAGGATTGTTTGGGCACTCCGTAATGATAT
CAAATTGAACATTCAACACGCACCCCCTGTATCAGTTTTCGGATGGACGA
GAGTAAAGACATACAAGAATATCATAGCGAGCCATTGGAGAGCAAATTCA
TGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTGCATTACGCTCGA
CCCTCCGATGTTTTTATACCAAAAGGTTATTTTAAAAACATTGAAAATAT
CAAAAATTTCGAGTTTTTTGAAGATGATACAGTTATATGTGGATTTCTTA
AAACAGATGAGTACGAATTGGTGCGAAAGGATTGTTTGGGCACTCCGTAA
TGATATCAAATTGAACATTCAACACGCACCCCCTGTATCAGTTTTCGGAT
GGACGAGAGTAAAGACATACAAGAATATCATAGCGAGCCATTGGAGAGCA
AATTCATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTGCATTAC
GCTCGACCCTCCGATGTTTTTATACCAAAAGGTTATTTTAAAAACATTGA
AAATATCAAAAATTTCGAGTTTTTTGAAGATGATACAGTTATATGTGGAT
TTCTTAAAACAGATGAGTACGAATTGGTGCGAAAGGATTGTTTGGGCACT
CCGTAATGATATCAAATTGAACATTCAACACGCACCCCCTGTATCAGTTT
TCGGATGGACGAGAGTAAAGACATACAAGAATATCATAGCGAGCCATTGG
AGAGCAAATTCATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTG
CATTACGCTCGACCCTCCGATGTTTTTATACCAAAAGGTTATTTTAAAAA
CATTGAAAATATCAAAAATTTCGAGTTTTTTGAAGATGATACAGTTATAT
GTGGATTTCTTAAAACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:255652..263965 - |
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