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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:1055579..1058689+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11214.1.p1 ID=MSTRG.11214.1.p1|Name=MSTRG.11214.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3111bp|location=Sequence derived from alignment at sc0000080_pilon:1055579..1058689+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTTAAACCACGAACATGAAAACAAACCAGCGTCGATAAACTCAAAATAG
TAGGCGGGAAAGAGATAAAGCAGAGAAAGCTTGATGGTTGGCTTGGAGAA
GTGGATAAAAATGTCTAAATGAGGAAGTAAATCTTTTACATAGAAAGCTT
CATTACATATTAATTTTCAGCTTATAGGAGGTTTGCATACAACCACTTAG
TAGAATAAATTAGAGTGTTCTGTcttttcccttttctttttccttttaat
tttttttaatcaaaataaaaaaagggagGGTGGGAGGGAGTTCTTTATGA
TTCATCTTTTTAGCTAGCTAACAAATTAAAGTTAAAACATGGGACGTTTT
AGAGATGAGCAAACAAACTCAAATTGAAATCTATGAATCTATGATAGTAC
AGGTTTGATCACACTACTGTTCTCCTGATTCTGatttaaatgattttaat
attttttaattaatccatataatctttggttttggcttttgtggttttgg
aatatatCCTACTGTCCTAGTCAAATTTACAATACACCATATGATTGTAT
TTTATGAAATGCCTTTTTAATGGTATGAATATTACAGACTTGATTTGCAT
TTGCCATTCCTGTATGTCCTATATGGTTAAGTCTCAGCAGGAAACACACC
TAAGTCTGTTGTGTCAAAAAGGTgtgcagtgtttttattttaggcCATAA
CACGGTCCAACTGGTTGGCATATGATGAAAACTTTGGGTAGTATTAAGCT
TTTAATTGatgtaaaaatcattttctaagCACCACCAATCAAAAGTACAA
AttctctttttcctttttcttcatTACCGTAAGATGGTCTAAAtaaatgt
caacatccctcttctaatttctttagagataggaatgacaagaaggtcag
aatcactgatagatTTTTTCCCCTCTGATTgctaaggaaaaaaatatttc
tatcagCGGgtctgaccttcctattattcctacattaaaagaataaattt
tggcgggaatttaatttggcggatagaCGAAAAAGTTTTGTCAGAGGGAA
TCTAATTTGGTGGTCAACttggaaaattaaatttggcactAGActttacc
gtaacttggtcgaATGTCGACTTCCCttctctaattccgacaccctcttt
atcagctgaaattgatagaataGGTTGCAACTATTTTCTTTGCtcagtgg
tcagagaggaataatcttttttcaatcagcaattcaagctttcatattat
tcctgtctctaatgAAGGGTGtgggaattagacgagggatgttgaagtta
gaccaacttacggtagttgATCacttctatttttttgttttgccagGTTT
CTGCTACCACATTGtatacaatttttattttgctaacaatatcttttttt
tccttttcaggtgaaaaagttttaaaatgttaagctaaaacaaatccaat
acAATATGcttgaatttcaaattattttgccGACAGGCCAGTCAATCAAC
ATAATCCTTAAGTCTAAAGAATCAACTGGGAAACATTTGAAAGAAAGTGT
TTTTAAAAGTGTAAACATTCTTCTTGATGATAAAGAATATTTTGGGTTGA
AATATTCCGATAGAAATGACGATACTCCGTCTTGGATGACTGATACcgat
aatttgaaatcaatgagCTTTTTAAAAGCAGACTCAAAGCACCCTTCCAT
GCAATTGTCTGTGCGCATGTATCCACCCAATCCTGATTTTGCCATGTCAA
CACCAGAGTCAAGAAATCTTTTCAGATGCCATATGAAAAATCTGCTTGTA
TCTAACAATCTTGGTTGTGATTCAAGAACTCATGCAATGTTGGATGGTTT
TGTGGCCCAGTATGAATTAGGGGATTATCATGAGGAAACTATGAAAGCAG
AGTATGGCAAAAAGATGAATAAGATCAATATTTATGCACCATCAATTCTC
AGTGCTGGAACCCCGATTGGTGAAGCAGAATATATTCAATTAGTTCGTAG
CTACCATAGAAAATTATCTGGAGTGAGACCAGCTCAGGCAGATATTTTGT
ATCTTGGTATGGTGCAGAAACTCCCACTATATGGCTACAAAGTCTATAAC
ATCTCagacaaaataaacaaaaattaccacATGGCAATCTCAGCTCAAGg
aattcatttcttttttgaatcAACTCTTGAAACATTTACCATTCCCAAAC
ACAGAGAAGCATATCCTTGGGCCTGTCTGGTTTTTGCAGAACAGGAAAGA
AATAAAGTGAAATTGGGTTTTTTCAATGACAAGGGAGCATTTTCAGAGCG
TTATGTCAAAGTTTCTGGAAAATTCAGCAATAGAAGTGGAGCAAAACTGG
TCCAAGATGTTGAGCTTCATAAAGCAAATTTCCTTGATAAGATTGATGGA
ACCCAAAGTATTGTTTACGATAGCAGAAAGAAGGCTCAAAGAGTCCATTC
TACAAAAATCCCAAGAAGAAATTCAGCTTTTAATAGAACAGTGAACACTT
TAGGAAGATCGATTAGGTCTTCTTTGAGAATCAACAAAAAGAAACGAATT
TCCAGTGAGGCTGACGCGGATTCAGGAACCGTAGATGAATTTGAACTTTC
ATCTAGCGAAGTACATGCTGATtaataaaaaaaaggtttaaactCTGCAA
TTCGTTGGAGAGAGTTTAAAATTCAGAATTGCGgttttaatcttatagtt
tcttattttattttcgacagtttttgcctgttttgatgattttaacatgc
gtttgttcattttgtttgataaagaaaaaggggAAACATAAttccaaaca
tattttttatataatgttGGTGGagcaaatttttatgttttcaaagcttt
ttctaaatccacatttaaaaaactgttttaattaaagaaaaaaaaacagc
ttgAATGTTTAGATTTCTTGCAGTGTGTATTTTTTCCACATGTCATCATG
TTCCTAATATAATTCTgtgttcataatttttttcctaatttatgaaaatt
gacACGTTGcatatattttgaaaagtaatttaTTGAAAGACTAAACTTTG
CAAattttagcatatttatttttagcatgtaagataattcattccataag
aattttatttt Coding sequence (CDS) from alignment at sc0000080_pilon:1055579..1058689+ >MSTRG.11214.1.p1 ID=MSTRG.11214.1.p1|Name=MSTRG.11214.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1170bp|location=Sequence derived from alignment at sc0000080_pilon:1055579..1058689+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGcttgaatttcaaattattttgccGACAGGCCAGTCAATCAACATAAT
CCTTAAGTCTAAAGAATCAACTGGGAAACATTTGAAAGAAAGTGTTTTTA
AAAGTGTAAACATTCTTCTTGATGATAAAGAATATTTTGGGTTGAAATAT
TCCGATAGAAATGACGATACTCCGTCTTGGATGACTGATACcgataattt
gaaatcaatgagCTTTTTAAAAGCAGACTCAAAGCACCCTTCCATGCAAT
TGTCTGTGCGCATGTATCCACCCAATCCTGATTTTGCCATGTCAACACCA
GAGTCAAGAAATCTTTTCAGATGCCATATGAAAAATCTGCTTGTATCTAA
CAATCTTGGTTGTGATTCAAGAACTCATGCAATGTTGGATGGTTTTGTGG
CCCAGTATGAATTAGGGGATTATCATGAGGAAACTATGAAAGCAGAGTAT
GGCAAAAAGATGAATAAGATCAATATTTATGCACCATCAATTCTCAGTGC
TGGAACCCCGATTGGTGAAGCAGAATATATTCAATTAGTTCGTAGCTACC
ATAGAAAATTATCTGGAGTGAGACCAGCTCAGGCAGATATTTTGTATCTT
GGTATGGTGCAGAAACTCCCACTATATGGCTACAAAGTCTATAACATCTC
agacaaaataaacaaaaattaccacATGGCAATCTCAGCTCAAGgaattc
atttcttttttgaatcAACTCTTGAAACATTTACCATTCCCAAACACAGA
GAAGCATATCCTTGGGCCTGTCTGGTTTTTGCAGAACAGGAAAGAAATAA
AGTGAAATTGGGTTTTTTCAATGACAAGGGAGCATTTTCAGAGCGTTATG
TCAAAGTTTCTGGAAAATTCAGCAATAGAAGTGGAGCAAAACTGGTCCAA
GATGTTGAGCTTCATAAAGCAAATTTCCTTGATAAGATTGATGGAACCCA
AAGTATTGTTTACGATAGCAGAAAGAAGGCTCAAAGAGTCCATTCTACAA
AAATCCCAAGAAGAAATTCAGCTTTTAATAGAACAGTGAACACTTTAGGA
AGATCGATTAGGTCTTCTTTGAGAATCAACAAAAAGAAACGAATTTCCAG
TGAGGCTGACGCGGATTCAGGAACCGTAGATGAATTTGAACTTTCATCTA
GCGAAGTACATGCTGATtaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:1055579..1058689 + |
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