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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000268_pilon:240481..242647+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045850 ID=XLOC_045850|Name=XLOC_045850|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2167bp|location=Sequence derived from alignment at sc0000268_pilon:240481..242647+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGATGTGGACAGTGATTACGCTCATCCAACTATATGTCTCTGGCTC
ATTCTGTCGACAATTTCTCAACAACATAGACGACGAAGACAGTTGGTATC
CAATAGATTATTCGAGCGAATCTTCTGCTGAACACTCTATTGAGGATGAA
ACATACAACAAATCACCATTTGTTTCAGAAAGAAGACAATATGCTGACCC
TTTCCAAGAAAACGATATGGAGCCAAACTTTTATGAAGAAATTGACGAAA
ATAAGATGGTGAGAATCACAGGCTACGAAAATATACCAGCAGTTCGTCCA
ACACAAAAACAAGATACAACAGAAACAGCCACTACAACTGCTGCCCCAAC
TACACCTCATTCCCATAAACCATCTCGCACTAACTCTACTGACCAAACAA
AACCTGGAAATCTCGctagaaaattgcaaaatgaagaagaagaccCGCTC
TGGTTCAAAATACACACACGAAGACGTAATCATAACAAGAATATCAATAT
TAATCATAACTCGAATGTTAATATTAACTCGAACCATAATTCCAATTCGA
ATCACAACTCTAACACAAATGTCAATATCAACCGTAACTCAAACGTGAAT
AGCAACTCGaaccataactcgaacacaaaCATCAACGTTAATCAAAACAC
TTTCAGACCTTTCTACATTGGCAACTTCCCAAAACACTGGCATATGTGTG
AGTTCTAGatatttctgacattttctCCTTTAGCTCTAATACGCACTCCG
CAGAAATAATTCGAAACAGGGTTTTCATAGTGAGATTGTTACAGTGGGCG
AAGTAAGGCAACAAtcttggaaatatcttgaaaatatgatatttccatta
tacatttgtaaatatgaaactatgacttttctatatttccaaagtttagg
aaatatgatatttccaaaagttggaaatattttgaaaatatgttatttca
atgaatttcaggtttggaaatatcatgaaataaaaaaaagtcatattttc
atatttactaaagtctgtctcaaaataatttgcagctgatacAAAAATgg
gttgtaacttttgatagaattcgaattaagtTATGACTTTGtgctcattg
aaaagatatttgtgattggaatattatcaagcaaatggtaaataattttt
tttgcttgatagtattccactcacaaaaatcttttcaacaagcacaaaat
cgcaacttcattcaaattctatcaaaagctaCAGCtaatttttgtctcag
ctgcaaattattttgagacagacctTAATGTATAATGCATGGAtatcaca
ttttcaaattatttccaagattggaaatctcttaatTCGCCCAGTTTTAG
TTTTATGGATTGAATAAAACTAAATCGTGTATCTCGTAATACTTATTTAT
AGGAATTAGAAAGATCTCCTGTGATCACTCTGAATACATTTGACATTGTT
TTTATCAGGTGGTGGATACATCATCGACAACTTTTCGCAATTGTGTTGTC
AAGGAAATCCAGTGAACAAACAACCATTTTCCATGTGCTGCGGGTAAGTT
AATCTTTTTCAGAAGACAAGATTTATTTGAACTGAGAGTCCGTTATGTAT
TCcaaaacacctttttgaccataGCCGCTAATTGCCGCGCggacattttt
tgtccgtttcatcccactaaaaccgtcccagtcgttttttttttgcacct
ttatagataatagaaaaatgtgtcaaaaaaaggattggatcgagtttagt
gggataaTTAGATAATTAAATGAcacgcacctgaccgcgcgactacggtc
gaaaaggtgtatacgcCCTTGTAATGATCAAAGCTCAGTGTCGATTTTGA
TTGGCGTTATGAAAATAATGCTGTGTACTTTTTGAATCTTCCTTTCTTGG
CTGGACTAAAAGCCTTTAACGGATCAATAAAACAGGGTTATTGTATTTTT
GAAGctattcttttttcaaactgaattTACTTTCAGCTCTGGGCTTTACA
ACTTGATCACGGAAGATTGTGTTTCTGGTTCACCCGTTGCCAAGAAGCTC
CCAGAATGTGGTTCATCTAAAACAACGTATGATGCTTTCAAACAGTTTTG
TTACCATGGCGATGTCTATGCTCACGAAAAATATGTGGAATGCGACGGTG
CTTTGTATTATGTCTAA Coding sequence (CDS) from alignment at sc0000268_pilon:240481..242647+ >XLOC_045850 ID=XLOC_045850|Name=XLOC_045850|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1926bp|location=Sequence derived from alignment at sc0000268_pilon:240481..242647+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGATGTGGACAGTGATTACGCTCATCCAACTATATGTCTCTGGCTC
ATTCTGTCGACAATTTCTCAACAACATAGACGACGAAGACAGTTGGTATC
CAATAGATTATTCGAGCGAATCTTCTGCTGAACACTCTATTGAGGATGAA
ACATACAACAAATCACCATTTGTTTCAGAAAGAAGACAATATGCTGACCC
TTTCCAAGAAAACGATATGGAGCCAAACTTTTATGAAGAAATTGACGAAA
ATAAGATGGTGAGAATCACAGGCTACGAAAATATACCAGCAGTTCGTCCA
ACACAAAAACAAGATACAACAGAAACAGCCACTACAACTGCTGCCCCAAC
TACACCTCATTCCCATAAACCATCTCGCACTAACTCTACTGACCAAACAA
AACCTGGAAATCTCGctagaaaattgcaaaatgaagaagaagaccCGCTC
TGGTTCAAAATACACACACGAAGACGTAATCATAACAAGAATATCAATAT
TAATCATAACTCGAATGTTAATATTAACTCGAACCATAATTCCAATTCGA
ATCACAACTCTAACACAAATGTCAATATCAACCGTAACTCAAACGTGAAT
AGCAACTCGaaccataactcgaacacaaaCATCAACGTTAATCAAAACAC
TTTCAGACCTTTCTACATTGGCAACTTCCCAAAACACTGGCATATGTATG
CAGATGTGGACAGTGATTACGCTCATCCAACTATATGTCTCTGGCTCATT
CTGTCGACAATTTCTCAACAACATAGACGACGAAGACAGTTGGTATCCAA
TAGATTATTCGAGCGAATCTTCTGCTGAACACTCTATTGAGGATGAAACA
TACAACAAATCACCATTTGTTTCAGAAAGAAGACAATATGCTGACCCTTT
CCAAGAAAACGATATGGAGCCAAACTTTTATGAAGAAATTGACGAAAATA
AGATGGTGAGAATCACAGGCTACGAAAATATACCAGCAGTTCGTCCAACA
CAAAAACAAGATACAACAGAAACAGCCACTACAACTGCTGCCCCAACTAC
ACCTCATTCCCATAAACCATCTCGCACTAACTCTACTGACCAAACAAAAC
CTGGAAATCTCGctagaaaattgcaaaatgaagaagaagaccCGCTCTGG
TTCAAAATACACACACGAAGACGTAATCATAACAAGAATATCAATATTAA
TCATAACTCGAATGTTAATATTAACTCGAACCATAATTCCAATTCGAATC
ACAACTCTAACACAAATGTCAATATCAACCGTAACTCAAACGTGAATAGC
AACTCGaaccataactcgaacacaaaCATCAACGTTAATCAAAACACTTT
CAGACCTTTCTACATTGGCAACTTCCCAAAACACTGGCATATGTGTGGTG
GATACATCATCGACAACTTTTCGCAATTGTGTTGTCAAGGAAATCCAGTG
AACAAACAACCATTTTCCATGTGCTGCGGGTGGTGGATACATCATCGACA
ACTTTTCGCAATTGTGTTGTCAAGGAAATCCAGTGAACAAACAACCATTT
TCCATGTGCTGCGGCTCTGGGCTTTACAACTTGATCACGGAAGATTGTGT
TTCTGGTTCACCCGTTGCCAAGAAGCTCCCAGAATGTGGTTCATCTAAAA
CAACGTATGATGCTTTCAAACAGTTTTGTTACCATGGCGATGTCTATGCT
CACGAAAAATATGTGGAATGCGACGGTGCTTTGTATTATGTCTAACTCTG
GGCTTTACAACTTGATCACGGAAGATTGTGTTTCTGGTTCACCCGTTGCC
AAGAAGCTCCCAGAATGTGGTTCATCTAAAACAACGTATGATGCTTTCAA
ACAGTTTTGTTACCATGGCGATGTCTATGCTCACGAAAAATATGTGGAAT
GCGACGGTGCTTTGTATTATGTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000268_pilon | genome | sc0000268_pilon:240481..242647 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 784-963:1988 |
| Aaloc | 700-780:1461 |
| Aaloc | 1-696:1 |
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