|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000035_pilon:1821381..1823510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045816 ID=XLOC_045816|Name=XLOC_045816|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2130bp|location=Sequence derived from alignment at sc0000035_pilon:1821381..1823510+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAGGAAAAGTTTCCGGTTGAGAACAGCCAAGGAATCAGTTGGTTT
GAAAGATTCTCATAAGCATGTACACACACGGACAGCTCAACGTAAATTTG
CCAGTAATGTTCATACACCATTCGAAAACCAAGTTCAGTCCATTGATACA
GAACCTGTTCCTGAGGTTGTTGATCAAACTCCACCTAAAACTgaagattt
tatcaattttttgtgtacaagagATTTATCATACCTTCCAAAAGATTTGG
AGATATTTGCCAATCCATCTAATGCTGTTATCCCCGATGAAGAAATGGAC
AACTTCTTTAAAGGCGAAACTAACGCTGAGGACGCTTTAGAACCACAAGA
TACCACTCCACCCGTCAACAAATTTCAACCTGCCCTACCGCCCACAACTG
GTGATAATGAAACACATTCCCCAGCAACAACAAAGCGACAAGAGAAAGAA
CCATCACTTGAACCAAAACCTAAAAAGCCATGTTTTATTGAATCACAGCA
GAAAGAACCAGAGAATTCTTTTATTATGGTAGAGGAAATAAAACCCACTA
GTAATGAAATGTCTGCCTTGTTTCCTTTTGTTGGTAAATTATTTGAGGAA
ACTGAATCAACACATAGAAGTATCGTTGTTATTCAACCAGATCAAACATG
GAAATGTTTCTCATACGTTCAAGAGAATCTAAAATTTGAAGTTGAAGTAT
ACCATGTCCATCGGTTAAAGCATCCTGCTGGCAGTAATTTCACAACACTA
CAATGTTTGCGGAAATGTTTTGAGAAGAATGAAGAGGAACCTTTTAAGAT
TCCATCTGTTGGTCTGGTTGAAGTTGATTTACCCTATTTGATGGAGGTTG
TTAGTAATTTTGGTGGTGTTGATTCTGTCAACTCTGACCAGAGTTGGAAA
GAACTTGCTGAACAATTACATATACCTAGATCAGCATCTCGGCGTGCTAT
ACAGCTAGAGAAAATTTACATGCAGTATGTTTTACCATATGAGTTACTCA
CTGATGCAGAGAAAAGTCGAATTGCATCTGCAGCTAAAAATGAAGCCAGG
AAGCATGATGAAAAAAGTAATATTTGTTCAAAGAAGGTATCTATTGAGAC
TTTCCATCGAATGGCTTGTAACGTTGCAACGTGTTACGAAATCAAAGACA
TGTCTGCTGAAACTATTGAAAATCATTTCTGGAAAGTTGTCAATTCTAGT
AATCGACATACAGCAACATACGCGGGTACTTTAGATTTATTATCTGATCC
CCAATCGTACCAGAATGCTAAAGCAAAAGTATTTTGGAAATTATCCACAG
TTTATAATCATGAGTTATCTGCTTTAAAATACCTTGGCAAGGTTTCACAA
GTTAGCTCACCGTTTTTGTTAACTGAGAGCGTGTTTTCAACCAGTGGATT
CTGGGAGATAGATGAATACGGATTTTACATTCTGTCTTATCTACATTCAG
GATCTGATAAGATCTGGTACGTCATCGAAACACCAGAATCTAAGATTGAA
CAAACAAAGTTACAAAAGCTTATAGATGAGAATCAAATACATAATACCTT
TTCAATGCCAAATGAAATTCTGGAAAAAGGTTTTACAGTGAAACGTTGCG
TACAAAAAGAAGGACAATTCTTGATTCTAGAACCAAATTGTTATTATTTC
ACTATCAGTACTGGTTATTCGCTATCGGAGATAATCAATTTTGCACCAAT
GTCATGGTTAGAAGATTTCAATGGTTTCGAATTCGACGAAGATTCTTTCA
TAGAAACGAGAATGCTTTTGAATTATACAAATGATGTTTTAAAGTGTGAA
AAAACTACTAGTTATAATAAAGATTTCTTGAAAGAGAAACTTGACCAGTT
GAAAAAACTGATTCTAAACTTGCAACAGAAATGCCAGAAAGCTGGAATCA
CCAGAACTAAATACACCAAAAACGCAACTAGAGATGCTGCTCATTGTTTT
GAATGTGAATGTAACTGTTACGTTTTAGTCATCTCATTACCAGATAACCC
TGatgaattctattgtaatattcATGGTTTTAAATTGAAACGTTCATTGA
GGACTAGTGCTGTTGCGACGTTTCTCATTTCACCGACAAAACTCTCACAA
TTGATCAATCGCATCGACACTTTGAGTTAG Coding sequence (CDS) from alignment at sc0000035_pilon:1821381..1823510+ >XLOC_045816 ID=XLOC_045816|Name=XLOC_045816|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4260bp|location=Sequence derived from alignment at sc0000035_pilon:1821381..1823510+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAGGAAAAGTTTCCGGTTGAGAACAGCCAAGGAATCAGTTGGTTT
GAAAGATTCTCATAAGCATGTACACACACGGACAGCTCAACGTAAATTTG
CCAGTAATGTTCATACACCATTCGAAAACCAAGTTCAGTCCATTGATACA
GAACCTGTTCCTGAGGTTGTTGATCAAACTCCACCTAAAACTgaagattt
tatcaattttttgtgtacaagagATTTATCATACCTTCCAAAAGATTTGG
AGATATTTGCCAATCCATCTAATGCTGTTATCCCCGATGAAGAAATGGAC
AACTTCTTTAAAGGCGAAACTAACGCTGAGGACGCTTTAGAACCACAAGA
TACCACTCCACCCGTCAACAAATTTCAACCTGCCCTACCGCCCACAACTG
GTGATAATGAAACACATTCCCCAGCAACAACAAAGCGACAAGAGAAAGAA
CCATCACTTGAACCAAAACCTAAAAAGCCATGTTTTATTGAATCACAGCA
GAAAGAACCAGAGAATTCTTTTATTATGGTAGAGGAAATAAAACCCACTA
GTAATGAAATGTCTGCCTTGTTTCCTTTTGTTGGTAAATTATTTGAGGAA
ACTGAATCAACACATAGAAGTATCGTTGTTATTCAACCAGATCAAACATG
GAAATGTTTCTCATACGTTCAAGAGAATCTAAAATTTGAAGTTGAAGTAT
ACCATGTCCATCGGTTAAAGCATCCTGCTGGCAGTAATTTCACAACACTA
CAATGTTTGCGGAAATGTTTTGAGAAGAATGAAGAGGAACCTTTTAAGAT
TCCATCTGTTGGTCTGGTTGAAGTTGATTTACCCTATTTGATGGAGGTTG
TTAGTAATTTTGGTGGTGTTGATTCTGTCAACTCTGACCAGAGTTGGAAA
GAACTTGCTGAACAATTACATATACCTAGATCAGCATCTCGGCGTGCTAT
ACAGCTAGAGAAAATTTACATGCAGTATGTTTTACCATATGAGTTACTCA
CTGATGCAGAGAAAAGTCGAATTGCATCTGCAGCTAAAAATGAAGCCAGG
AAGCATGATGAAAAAAGTAATATTTGTTCAAAGAAGGTATCTATTGAGAC
TTTCCATCGAATGGCTTGTAACGTTGCAACGTGTTACGAAATCAAAGACA
TGTCTGCTGAAACTATTGAAAATCATTTCTGGAAAGTTGTCAATTCTAGT
AATCGACATACAGCAACATACGCGGGTACTTTAGATTTATTATCTGATCC
CCAATCGTACCAGAATGCTAAAGCAAAAGTATTTTGGAAATTATCCACAG
TTTATAATCATGAGTTATCTGCTTTAAAATACCTTGGCAAGGTTTCACAA
GTTAGCTCACCGTTTTTGTTAACTGAGAGCGTGTTTTCAACCAGTGGATT
CTGGGAGATAGATGAATACGGATTTTACATTCTGTCTTATCTACATTCAG
GATCTGATAAGATCTGGTACGTCATCGAAACACCAGAATCTAAGATTGAA
CAAACAAAGTTACAAAAGCTTATAGATGAGAATCAAATACATAATACCTT
TTCAATGCCAAATGAAATTCTGGAAAAAGGTTTTACAGTGAAACGTTGCG
TACAAAAAGAAGGACAATTCTTGATTCTAGAACCAAATTGTTATTATTTC
ACTATCAGTACTGGTTATTCGCTATCGGAGATAATCAATTTTGCACCAAT
GTCATGGTTAGAAGATTTCAATGGTTTCGAATTCGACGAAGATTCTTTCA
TAGAAACGAGAATGCTTTTGAATTATACAAATGATGTTTTAAAGTGTGAA
AAAACTACTAGTTATAATAAAGATTTCTTGAAAGAGAAACTTGACCAGTT
GAAAAAACTGATTCTAAACTTGCAACAGAAATGCCAGAAAGCTGGAATCA
CCAGAACTAAATACACCAAAAACGCAACTAGAGATGCTGCTCATTGTTTT
GAATGTGAATGTAACTGTTACGTTTTAGTCATCTCATTACCAGATAACCC
TGatgaattctattgtaatattcATGGTTTTAAATTGAAACGTTCATTGA
GGACTAGTGCTGTTGCGACGTTTCTCATTTCACCGACAAAACTCTCACAA
TTGATCAATCGCATCGACACTTTGAGTTAGATGATGAGGAAAAGTTTCCG
GTTGAGAACAGCCAAGGAATCAGTTGGTTTGAAAGATTCTCATAAGCATG
TACACACACGGACAGCTCAACGTAAATTTGCCAGTAATGTTCATACACCA
TTCGAAAACCAAGTTCAGTCCATTGATACAGAACCTGTTCCTGAGGTTGT
TGATCAAACTCCACCTAAAACTgaagattttatcaattttttgtgtacaa
gagATTTATCATACCTTCCAAAAGATTTGGAGATATTTGCCAATCCATCT
AATGCTGTTATCCCCGATGAAGAAATGGACAACTTCTTTAAAGGCGAAAC
TAACGCTGAGGACGCTTTAGAACCACAAGATACCACTCCACCCGTCAACA
AATTTCAACCTGCCCTACCGCCCACAACTGGTGATAATGAAACACATTCC
CCAGCAACAACAAAGCGACAAGAGAAAGAACCATCACTTGAACCAAAACC
TAAAAAGCCATGTTTTATTGAATCACAGCAGAAAGAACCAGAGAATTCTT
TTATTATGGTAGAGGAAATAAAACCCACTAGTAATGAAATGTCTGCCTTG
TTTCCTTTTGTTGGTAAATTATTTGAGGAAACTGAATCAACACATAGAAG
TATCGTTGTTATTCAACCAGATCAAACATGGAAATGTTTCTCATACGTTC
AAGAGAATCTAAAATTTGAAGTTGAAGTATACCATGTCCATCGGTTAAAG
CATCCTGCTGGCAGTAATTTCACAACACTACAATGTTTGCGGAAATGTTT
TGAGAAGAATGAAGAGGAACCTTTTAAGATTCCATCTGTTGGTCTGGTTG
AAGTTGATTTACCCTATTTGATGGAGGTTGTTAGTAATTTTGGTGGTGTT
GATTCTGTCAACTCTGACCAGAGTTGGAAAGAACTTGCTGAACAATTACA
TATACCTAGATCAGCATCTCGGCGTGCTATACAGCTAGAGAAAATTTACA
TGCAGTATGTTTTACCATATGAGTTACTCACTGATGCAGAGAAAAGTCGA
ATTGCATCTGCAGCTAAAAATGAAGCCAGGAAGCATGATGAAAAAAGTAA
TATTTGTTCAAAGAAGGTATCTATTGAGACTTTCCATCGAATGGCTTGTA
ACGTTGCAACGTGTTACGAAATCAAAGACATGTCTGCTGAAACTATTGAA
AATCATTTCTGGAAAGTTGTCAATTCTAGTAATCGACATACAGCAACATA
CGCGGGTACTTTAGATTTATTATCTGATCCCCAATCGTACCAGAATGCTA
AAGCAAAAGTATTTTGGAAATTATCCACAGTTTATAATCATGAGTTATCT
GCTTTAAAATACCTTGGCAAGGTTTCACAAGTTAGCTCACCGTTTTTGTT
AACTGAGAGCGTGTTTTCAACCAGTGGATTCTGGGAGATAGATGAATACG
GATTTTACATTCTGTCTTATCTACATTCAGGATCTGATAAGATCTGGTAC
GTCATCGAAACACCAGAATCTAAGATTGAACAAACAAAGTTACAAAAGCT
TATAGATGAGAATCAAATACATAATACCTTTTCAATGCCAAATGAAATTC
TGGAAAAAGGTTTTACAGTGAAACGTTGCGTACAAAAAGAAGGACAATTC
TTGATTCTAGAACCAAATTGTTATTATTTCACTATCAGTACTGGTTATTC
GCTATCGGAGATAATCAATTTTGCACCAATGTCATGGTTAGAAGATTTCA
ATGGTTTCGAATTCGACGAAGATTCTTTCATAGAAACGAGAATGCTTTTG
AATTATACAAATGATGTTTTAAAGTGTGAAAAAACTACTAGTTATAATAA
AGATTTCTTGAAAGAGAAACTTGACCAGTTGAAAAAACTGATTCTAAACT
TGCAACAGAAATGCCAGAAAGCTGGAATCACCAGAACTAAATACACCAAA
AACGCAACTAGAGATGCTGCTCATTGTTTTGAATGTGAATGTAACTGTTA
CGTTTTAGTCATCTCATTACCAGATAACCCTGatgaattctattgtaata
ttcATGGTTTTAAATTGAAACGTTCATTGAGGACTAGTGCTGTTGCGACG
TTTCTCATTTCACCGACAAAACTCTCACAATTGATCAATCGCATCGACAC
TTTGAGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000035_pilon | genome | sc0000035_pilon:1821381..1823510 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2130:1 |
|
