|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000024_pilon:2140882..2144864+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045714 ID=XLOC_045714|Name=XLOC_045714|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3983bp|location=Sequence derived from alignment at sc0000024_pilon:2140882..2144864+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGAGAGAAGGACTGAAGAGGTGATTAAAGACGTCAAAATGAGAGCCAG
ACCTGgtgaatatttttaacttttttagaaatGATAATCGATATAAGAAT
TCATGCTATCCGTGTATCAATCAaggcatttcaaattttcattccttTAA
AAATAGTTACCAGAGGCAAAGGTTGGTATTTCTCGGCGAGAGGGGCTATT
AATAACGACGAACGAAATTAGTCCTCAAACTTCAGAATTGCTTTAAATAC
CCTCTCATTTTTCTTCAGAACTGAAAAGCCTCGAAGGCTGGCAACGACTT
GGTTACGCTGATTCATTTGACGCTTCACTAAGCAGGCCGTGTGATAACGT
GCCAAGGGTCGATTGCAGTACTTTATCACACCAAGATTTTATTGAACAAT
ATGAGAAAAAATGTAAACCTGTTGTATTAACTGGATGTCAGAAACACTGG
TTGGCCAATAGGAAGTGGACTTTAAAGGTGAATAATACACTATGGGTAGG
AATTCGtaaaagaaaatctccaaacgaaaaatgttccaaaaattgtgaaa
atctaCTTTCGTACTCTCTTTCGATCGTTATTATAAAGGCCGTTGAGATG
TTGATTTACATTACAAAATGAGATGCACAGAGAAAAATAGCACAACATTA
GCTCTAAATTACTTGAAGGTGACTAAGTGATATTTTTGTTAGACCCTAGC
GTTTGATCATTAACCCCAGTATGTGAATCAGCCTGCCTTCTTTATTTAGC
TTACATTTTTTCTTATCTGATGACTTGCTTCTCCTTACGAAAGATGCCCG
GTTCTGTATTGAATGGTCTATGAGTCGTCTCGTTAGAACCGTCTTACGCT
TTATTTTCTGGATCAAGTGCGTTAATCCGGCGCGAACCACTAATGGCGGA
TTAACGCACTTTATCCAAAAAATATAGCGTAAGACGGTTCTCTGATCCTT
GATCATTAGTATGCAAATCGACTTGCCTCCATTAAGCTTTCACTCTTTAC
TATCTACTACTACCATAGAAACTAGCGAAGAAATATCGCAATCAAAAGTT
CAAAGTGGGCGAGGACGACGATGGTTATTCggtgaaaatgaaattcaaat
attATTACGAATATTTGAAAGGACAGAACGATGACAGTCCTCTCTACATA
TTTGATGGTTCTTATGGCGAGGTAAGGTTTCTAACTAAAAAGTTAAGGAC
TCAGAACTGGATTAATCGTTTTGGTTATTATGGTAGTTTTGGGTTCAATC
TCTGGCTGGCTATCTGCTAAATGCTCAGCTTTCTaaaagaaggatcaagg
gtaaatgTAGAAAATCCAGGCAgaaaatccagggagaaagagtggcgccc
tcacCCTACCGTTTCGAAAGAGAAGCCTTCGAGCCACCTTGTATTGTGGT
CGCAAGACGAGCTCAAGGatcttcttcaattttagaaaataaattcacAA
GATTTCAAAGGAGTTCTTCTCCATTAGTTTGCTTTATATAAAGTCTACTT
ACTTTTCATTCcagcctgttttttttttcggtacTTGAGAGTAAGACTAA
GATATTAATTTATATCTTCGTAAAGGCTGTGCCAGTAATTTTCGCAGATT
ATCTTGTGTAGCCACACAAGGTAGGTCACATGTGGAGCAATCAGACATGC
TCGGAGATTATGATGTCTTTTCCGcctctttttttttatcaagcaTTCAC
GTAAAAGGAAGTTGCTACAAGATTATGCACCTCCAACTTTCTTCCAAGAC
GATTTGTTTCGGTATGCAAGCGAGAAAAGAAGACCTCCTTACAGGTTGGT
TGACAAAAATGAATTGCTTATCTTTTGAAGTTTGGTTTCTAGCCTGTTGT
TTGGTACCACATTGTAACATTCATACACATGGTTTGGGTACCCCCCTCTA
CAAAGTTATGTAGGTGTCTTCTAATCTTGGtaactttttaaattcttctt
ttgaatgaaatgttTTTGCTGGAGTGTTTTACAGGCTTAAGATTTTTAAT
TcagaattagaaaaatttctaaaagacATCGTAGGGGGATGGCATTATGA
ATTTGCTGGGATTGAAAATTTCCTCAGTTCAAGGtagaatttatgaaaat
ttaaggcCCCTGAAAAAGTACTTTTATAGTTTCATGTTTTTGAAATAACA
CAAGCTATGACCTCAGAAAGCTCTTTACCGAAATGTTACAAATTTTCTAT
AATACAGGTGGGTTGTGATCGGACCATCTCGTTCGGGTACTGGAATACAT
ATCGACCCTCTGGGCACAAGTGCTTGGAACGCGTTGTTAAGCGGACATAA
GTGGTGGGTCATGCTACCGACGGAAACACCCAAACACATGATCACCGTAC
CTAAAGGTCTCTTTATAGAATTGTTTTGAGTAGAATGGATATGAGTCATG
ATAGCGTGTAGATAGCTAgaatatttatctttttaatttcaagtttAAGA
AGCTAACTCCAAAAAACTACTTTATGCAAATAGATTCGCCATAATTCCAC
GATTCTTTATTATAGGGCTAAGTTTAATACCCTTcgacatcaaaaataaa
ttcaccCAAGACCCCTTTCTCTTAACAAATTGTCGGCCGACATGTTTTCC
TAAGGCATGATTTGACGACACTTCCTAATTTCTAAATGACCCTTTTTGAA
GAGCTATAATTGCCAACCATTAAATAACACAATGTTATTATGTAACATAA
ACAACTGAACTTGCTTTTTCACAGGCGAAGGTCAACACCAGTCTGGAGAA
GGCGTTCAGTGGTTCCAAAAAGTCTACCCTAAAATCAAAAGTCCAACATG
GCCGAAAGAATACGCTCCGGTATGCAAATttatatttctttaaatttccA
GAACAAGGcttaattttagcaaaaatctaGTAAGAATAAAACAAAAGCCG
AGGCTCGAAATGAATAAGAAATTTCTTGTAACAGCAGAAACATTTCGAGG
AAACAATGAGTACCTATCTCGTTTGAAATACAGTATTGAATGGAGGATGG
ATGTTTCAGGCTTGAAGTAAGTTACATGAAATATTGAATATTCTTGACAA
ATCACGGTGGCATTACCTAATATTTTCTTCCTTGAAATGGGCGATTAAGT
CTAGCAGTTTCATTTTGAAAACCCCTTTCTGAACCAAATCGGACTAAACA
TCGTTGGGCTTTTTTGTAGTTGGAGATCCTACAGAAGCCTGGGGAGACTG
TCTTCGTACCCGGTGGATGGTGGCATGTCGTGTTGAACCTGGGTCAAACA
GTGGCTGTTACACAAAACTTCGCTTCACCTACTAACTTTCACATCGTCTG
GCACAAGACCGTTCGAAGTCGACCCAAATTATCTAAGTACTGGCTAAGTC
AACTCAGAGTAAGTAGTACTGTATTTTTTGCCTTGTTTATGTATTAAAAT
TGAGTACAAATCTATTCCAATTTTCAAGGAAGAAGTTTAAACTTTTTCGG
AGAGTTCTTGCGAAGTTGTGAATTGTAATAATGgccttttttaatttcgc
atCCAAGTATAAGGCTATATGCTGATGCGTTTTTCAAACTTGATGGCAGC
CACTCTATAAACTTTTAAAGTACATGGATAAACTAATCTCGAAAATACTT
TATgtgcaaataaaataaaataaatacatCATTGAAGGGATAAAGAAGTG
AATGGGGAAAACTAGAATCAGAGCATCAGTGGCTTAAAAGACGTTTGAAA
TTTAGAAGAGTAAAGTTAGGAATTGGACAACTAACCAAATACAGtattaa
ataaaatcaacttctttTCATAGATGTATCGACCGGAGATAGCCAAGATA
GCGGACCAAGTCAACATCACCGGTAGCAGTGGCATTGCATCCGATTCAAG
TTCAAGCAGTTCCAGCAGTTCCAGTTCTTCCGAATCGGATACCGATTCTG
AAGATTCTTCACCCGATTCGGTTTACGAAGATGATGATCGACGAGAAATT
CGGGAAAACGGACAATCTTCTCCTAAAAGGTAA Coding sequence (CDS) from alignment at sc0000024_pilon:2140882..2144864+ >XLOC_045714 ID=XLOC_045714|Name=XLOC_045714|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2322bp|location=Sequence derived from alignment at sc0000024_pilon:2140882..2144864+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGAGAGAAGGACTGAAGAGGTGATTAAAGACGTCAAAATGAGAGCCAG
ACCTGatGGAGAGAAGGACTGAAGAGGTGATTAAAGACGTCAAAATGAGA
GCCAGACCTGAACTGAAAAGCCTCGAAGGCTGGCAACGACTTGGTTACGC
TGATTCATTTGACGCTTCACTAAGCAGGCCGTGTGATAACGTGCCAAGGG
TCGATTGCAGTACTTTATCACACCAAGATTTTATTGAACAATATGAGAAA
AAATGTAAACCTGTTGTATTAACTGGATGTCAGAAACACTGGTTGGCCAA
TAGGAAGTGGACTTTAAAGAACTGAAAAGCCTCGAAGGCTGGCAACGACT
TGGTTACGCTGATTCATTTGACGCTTCACTAAGCAGGCCGTGTGATAACG
TGCCAAGGGTCGATTGCAGTACTTTATCACACCAAGATTTTATTGAACAA
TATGAGAAAAAATGTAAACCTGTTGTATTAACTGGATGTCAGAAACACTG
GTTGGCCAATAGGAAGTGGACTTTAAAGAAACTAGCGAAGAAATATCGCA
ATCAAAAGTTCAAAGTGGGCGAGGACGACGATGGTTATTCggtgaaaatg
aaattcaaatattATTACGAATATTTGAAAGGACAGAACGATGACAGTCC
TCTCTACATATTTGATGGTTCTTATGGCGAGAAACTAGCGAAGAAATATC
GCAATCAAAAGTTCAAAGTGGGCGAGGACGACGATGGTTATTCggtgaaa
atgaaattcaaatattATTACGAATATTTGAAAGGACAGAACGATGACAG
TCCTCTCTACATATTTGATGGTTCTTATGGCGAGcaTTCACGTAAAAGGA
AGTTGCTACAAGATTATGCACCTCCAACTTTCTTCCAAGACGATTTGTTT
CGGTATGCAAGCGAGAAAAGAAGACCTCCTTACAGcaTTCACGTAAAAGG
AAGTTGCTACAAGATTATGCACCTCCAACTTTCTTCCAAGACGATTTGTT
TCGGTATGCAAGCGAGAAAAGAAGACCTCCTTACAGGTGGGTTGTGATCG
GACCATCTCGTTCGGGTACTGGAATACATATCGACCCTCTGGGCACAAGT
GCTTGGAACGCGTTGTTAAGCGGACATAAGTGGTGGGTCATGCTACCGAC
GGAAACACCCAAACACATGATCACCGTACCTAAAGGTGGGTTGTGATCGG
ACCATCTCGTTCGGGTACTGGAATACATATCGACCCTCTGGGCACAAGTG
CTTGGAACGCGTTGTTAAGCGGACATAAGTGGTGGGTCATGCTACCGACG
GAAACACCCAAACACATGATCACCGTACCTAAAGGCGAAGGTCAACACCA
GTCTGGAGAAGGCGTTCAGTGGTTCCAAAAAGTCTACCCTAAAATCAAAA
GTCCAACATGGCCGAAAGAATACGCTCCGGCGAAGGTCAACACCAGTCTG
GAGAAGGCGTTCAGTGGTTCCAAAAAGTCTACCCTAAAATCAAAAGTCCA
ACATGGCCGAAAGAATACGCTCCGTTGGAGATCCTACAGAAGCCTGGGGA
GACTGTCTTCGTACCCGGTGGATGGTGGCATGTCGTGTTGAACCTGGGTC
AAACAGTGGCTGTTACACAAAACTTCGCTTCACCTACTAACTTTCACATC
GTCTGGCACAAGACCGTTCGAAGTCGACCCAAATTATCTAAGTACTGGCT
AAGTCAACTCAGATTGGAGATCCTACAGAAGCCTGGGGAGACTGTCTTCG
TACCCGGTGGATGGTGGCATGTCGTGTTGAACCTGGGTCAAACAGTGGCT
GTTACACAAAACTTCGCTTCACCTACTAACTTTCACATCGTCTGGCACAA
GACCGTTCGAAGTCGACCCAAATTATCTAAGTACTGGCTAAGTCAACTCA
GAATGTATCGACCGGAGATAGCCAAGATAGCGGACCAAGTCAACATCACC
GGTAGCAGTGGCATTGCATCCGATTCAAGTTCAAGCAGTTCCAGCAGTTC
CAGTTCTTCCGAATCGGATACCGATTCTGAAGATTCTTCACCCGATTCGG
TTTACGAAGATGATGATCGACGAGAAATTCGGGAAAACGGACAATCTTCT
CCTAAAAGGTAAATGTATCGACCGGAGATAGCCAAGATAGCGGACCAAGT
CAACATCACCGGTAGCAGTGGCATTGCATCCGATTCAAGTTCAAGCAGTT
CCAGCAGTTCCAGTTCTTCCGAATCGGATACCGATTCTGAAGATTCTTCA
CCCGATTCGGTTTACGAAGATGATGATCGACGAGAAATTCGGGAAAACGG
ACAATCTTCTCCTAAAAGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000024_pilon | genome | sc0000024_pilon:2140882..2144864 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 952-1161:3774 |
| Aaloc | 763-951:3170 |
| Aaloc | 670-762:2727 |
| Aaloc | 520-666:2209 |
| Aaloc | 418-516:1694 |
| Aaloc | 265-417:1019 |
| Aaloc | 58-264:271 |
| Aaloc | 1-54:1 |
|
