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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000193_pilon:213024..217048+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045682 ID=XLOC_045682|Name=XLOC_045682|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4025bp|location=Sequence derived from alignment at sc0000193_pilon:213024..217048+ (Clytia hemisphaerica_ch_hm2_pilon)
ATggatttttctcgaaaaaaaacaaggaaaccTAGATTTTCTGAGATATT
AGTTAGAGAATTGAATCAACAAAATATTATCTTGATTGAGCGAAACAATT
ATTTAGAAGATGAAAATCAGGCTCTAAAAGGCCAGAACACAGAGCTGAAG
AAAAGGTTACGCGAAGAAGAAAACGATGTATGTGATGATTTAGTGGGGAG
CAGAGGGAGTGAGGCTTCTGATCTAGAAGAAATGTTAGATGAATCGGTTG
AGAGCGACGTAAGCGACGAGGCCACCGATCCAGCGCCTTCACATGAAAAA
AGCACCATCAGTGTAGAGAAAAGATTAATGTGGGGTGCAAAAAGGTATAA
ATTCATGAAAGGAAAAACCATTCTGAATTATAACTCTTCTTATGGAGATT
GGTATGAATGTATTACAAGAGATATGGAAGACGAAAAACAGTACGGTGAT
GATGATGTTTGCTTCATaaaaaaaGAGATAGGAGCTGGTCAAACTATTCA
TGCCGTGCTTACTCAGGATCCAAACGAGTTTACGAAAATCAGAACATATG
AAGATGAGGAAAGCGAATTTCCGTCCGAAACCAAATCGAAACTACGACCA
AGCACAGATAACGCAAATATTTTCGTCATTAACGGTAAAGGGAATAAGGA
TGCACAACGGATGAAATTTTATGTTCTGTCACCCATGTCACCCATGTCAC
GTTTCGAGATGAGACAGTCAAACACTGTGTTTTACaatgaaaagaatgat
aaagTCGAAAGACATTCTTGGAAGTCAAAAGACATTCTTGGAAGGCTCGA
CCAAAAGACGTATCACAGTCTACTTTTATAATCTTAGgagtattttaata
tttttaaaaggagCAGCATTAGTATATCGTTATTCTGTACtttcaaataa
taataaatctTTCATAATATTTTCTCCTTAATAAAAGTTACATAGTCCTT
TTAAGTAAGTCTACTGTGgctatttttggtcattttaggTTGTTCTGGCC
TATTTCGCAGGGCTTGTCTATCTAAGAAAGATAATGAAAACATTTgaaca
cagatttgaaatcTGCAAAGTTCAATTGATTTAAAAAGTGTCATATCATC
ATTCTCGAACCAGTAGAAAAACTTTTCACGTCATGTTTTTAATCTTTCAA
GTCTTGAATCTGAGATAATCctctttaaaatatctttccaacggcgaaca
acattttttagcgagtttatgtatctttttttttcagcaacGGAGACGGT
TATCTtgtgatttgtctagatcctgatcaactgagAACGACAATAAACCT
TTCCCGAGATGTTTTCGACTTTTTTGTTACAATGTTTGAGTGTTTCATTT
TGGTGaaataaaaatctgtagaaaaatgcaaaacaaattaaaaacttttt
ttttaaacaatataaTTAAATGAAAACGAGGCCGGGCTGTATGTTTCGAT
TTTCATGAATAAATATAGCCATATACAGTGATAGAAAAGAgcttttgagc
tcaaatttccagGATCGATTCGTCTCTATAATACATAAACATAGAAATTT
TGATATGAtttgaaaacctttaaaatataGCAACatctcgggaaaggtgt
ataaACAatcacttttaccgtcctcgatattGCGGGTAAGAAGTGCGGGC
TAATCTAAATCTTTTCAGTCACTCCACTGTTCTCAAAAGTGCAAGTATAT
AAATTCCCTATAATAGCAAAATTGCGTGCAGAAAAAATGTGAAAAACTAG
AGGgcttaaatatattttgagagggacaTTTTTACGCAAATACTATTAGA
GGCAACCCGAATCGACAAATTGAACGATTTCTAAAACTTTAAACCTGACA
TTAGAAAATGTGATTCTGATCATGCCGAGTACACATAGAGAGGGAGagca
agaaaaaaaggagggttaaacGAAAGAACAGTGAAATCTGATtcgacaaa
caaacaaactctaTCTAAGAGACCTTACTAACAAATACAGTACGGTTTCT
TGGATTATAACGTTCGAACGAATAAGAGCAGTTTTGTCTTTTTCATCTAG
AAAGAAGGCATTCAAAATGGACGAAGTGTTTATCTCAAACATGTACAAAC
TTACATGGGGCGCAGAGAAATATTTCCtgggaaaacaacaaaaaagaatt
ttgtattcatcataTCAAGAATGGTATCAATCCTTGGTACAGGAACTGTT
GCCAACTCCTTGTATGTATTATGGTAACAGTCGATATTCCTTTATGAAGA
TCACACGAGGAAGTGGAAATGAGAAGTTAGTGTCAAGCAGCAATGGAATC
ACCATCAACAATACCAACCGATCAACGAGCGTAGTTGGAAGTTCACCAGT
CTCCGGATGCGCAAACTATTTCTTGTTGCATCCAACAGATCTCCAAACAT
GTAGTGAGCTCAAGAAAAATGTCCACGAGAGTTCAATGAGAAGTGGGGAG
AGTATTCTAACTTGGGATATCGAATTGCATAAAGTTGACCCAGATTACCA
AATGACCCAACAATATTTTATAATATTAGGAATTTTGAACTGAGAACTTG
TAAATCTTTTAATAATCTACTAAACTTTACGATTGGACTAATTATTGTAA
GATTACATATATCATTTTCAGGGATGTTatccagaaaatgaaaattattt
cagaTTATATaactaaaatgaaagaaaatcaacGGATGAAATTCTAATTA
CTATTTTTGAAATCCAAGAATATGTAAGAAATTACAGTAGAACTTCAATT
AGCGGACACTTTAAAAAGCGGAAACCTCTGATTAGCGGACAAAATGTTTT
TCCCCGgctgtttcctagtcaaatcctaataaaaaagattataaaaaagg
TGGACACTTTATAGGAACACAAGAattaaaaatgatcaaaatccTAGAAC
AAATTAAAAGAATAATCTGTGCCTCAGATTTTACAAACAACCAGAACTAa
acccattttaagttttttattataagaacctAGCGTATCAACAACATCGA
TAAAGCATTTAAGcttgtaaatttcaaaaaaagaattactggttcttata
aaaaaagcgtgtaaatatTGTAATGAAGGTCGGTTCTTTTATTGTCAAGT
TTCTCAGATGAAAGGGTAAACGACACCCCATTActtttaatataaaaaat
aaagacaTTTTGCGGGGGCTGAATGTTCgtGTATTTTTGTATTTTAAGGT
CTCTAATTGCTTTTGTTCAGGTTATTGGGTTACACGTGTTTTCAGTCAAA
AGGCAATCCAATTGAACAAGATTATTACATTTAACGCATCCCTTTGCTTT
AGAGCAGTACGTTTTGCTGGAAAATAATGGATCTTTGCTATCGAGTTTAA
GTTAAGTTAGCTAAGCTAGTTAAAAGGGCGGCTAGAGAGGAAAATTTTGA
ACGGGGAATGAAGTCACTTATTTACGATCTAAGACGTATGATCCACGTGG
TAATAAAATTCATCACCGGTTCAACCGGTATCAGGTTTCCAAAAATGTAC
CGCTCGATGACaaaaaaaaCGCTAGATTAAACCCATCAAGCTAAAAGTGG
CGCAAATCACTTTTACTACTTTGAGAAAGTTTTCTCTCTAGTAATCAGCT
AAAGCCTTTAAACTCAACGATCTTTGCACTTTGAGATATATCGGAGGCCC
ATCGGAGGGCCTCAAAGGAGGAGATTAATCTTGAAATACGAGATTTGGTT
TGGAAAGATAAACAATTATATTCAAAGTCTAAAATTACTGATGTTCTAAt
cgtttactttttttaaattcatttttaagtGACATCAGATAATATCTACA
CACTTAAAAATGTCTCATTTAAACGTAGATGATAAGACAAAGGCTTCCTT
TGGCAGGTTCTATGTCTCCAACATGTACAGACTTGTATGGGGCGCAGAAC
GATATTTCCTCGGAAAACAACAAGAATTGGCTTTGTATAAGTCTTACCAG
GATTGGTATCAGTTTGTTGAAAATTTACTGGAGGTTGATGTTCGATATGG
GAATAAACAATTTACCTTTATTAAG Coding sequence (CDS) from alignment at sc0000193_pilon:213024..217048+ >XLOC_045682 ID=XLOC_045682|Name=XLOC_045682|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1068bp|location=Sequence derived from alignment at sc0000193_pilon:213024..217048+ (Clytia hemisphaerica_ch_hm2_pilon)
ATggatttttctcgaaaaaaaacaaggaaaccTAGATTTTCTGAGATATT
AGTTAGAGAATTGAATCAACAAAATATTATCTTGATTGAGCGAAACAATT
ATTTAGAAGATGAAAATCAGGCTCTAAAAGGCCAGAACACAGAGCTGAAG
AAAAGGTTACGCGAAGAAGAAAACGATGTATGTGATGATTTAGTGGGGAG
CAGAGGGAGTGAGGCTTCTGATCTAGAAGAAATGTTAGATGAATCGGTTG
AGAGCGACGTAAGCGACGAGGCCACCGATCCAGCGCCTTCACATGAAAAA
AGCACCATCAGTGTAGAGAAAAGATTAATGTGGGGTGCAAAAAGGTATAA
ATTCATGAAAGGAAAAACCATTCTGAATTATAACTCTTCATggatttttc
tcgaaaaaaaacaaggaaaccTAGATTTTCTGAGATATTAGTTAGAGAAT
TGAATCAACAAAATATTATCTTGATTGAGCGAAACAATTATTTAGAAGAT
GAAAATCAGGCTCTAAAAGGCCAGAACACAGAGCTGAAGAAAAGGTTACG
CGAAGAAGAAAACGATGTATGTGATGATTTAGTGGGGAGCAGAGGGAGTG
AGGCTTCTGATCTAGAAGAAATGTTAGATGAATCGGTTGAGAGCGACGTA
AGCGACGAGGCCACCGATCCAGCGCCTTCACATGAAAAAAGCACCATCAG
TGTAGAGAAAAGATTAATGTGGGGTGCAAAAAGGTATAAATTCATGAAAG
GAAAAACCATTCTGAATTATAACTCTTCACTTGTATGGGGCGCAGAACGA
TATTTCCTCGGAAAACAACAAGAATTGGCTTTGTATAAGTCTTACCAGGA
TTGGTATCAGTTTGTTGAAAATTTACTGGAGGTTGATGTTCGATATGGGA
ATAAACAATTTACCTTTATTAAGACTTGTATGGGGCGCAGAACGATATTT
CCTCGGAAAACAACAAGAATTGGCTTTGTATAAGTCTTACCAGGATTGGT
ATCAGTTTGTTGAAAATTTACTGGAGGTTGATGTTCGATATGGGAATAAA
CAATTTACCTTTATTAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000193_pilon | genome | sc0000193_pilon:213024..217048 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 418-537:3906 |
| Aaloc | 391-414:3882 |
| Aaloc | 1-387:1 |
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