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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000193_pilon:109308..116887+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045651 ID=XLOC_045651|Name=XLOC_045651|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7580bp|location=Sequence derived from alignment at sc0000193_pilon:109308..116887+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACTACGAAGAATTGGTTTGATCAATATCTCTTTTGCGGTTTTTTG
TTGGATGTTGATCACTTGGGTGTCCACTGCTCCCGGTATTAACCCTGTAA
GTTTCTCCCTGGTGgatccacagatatctgtaaagcccgaagggctagat
aggcaactttaagctttctccagcaaaaaaaagtgaagcaaaaatttgac
tttttaaatttcgtgccgatagataggatctagcattttaattgtttttg
gagcgcgagatcaaaaaaaataggcggcaaacgctatttcacatctctca
aaccggtgaaattgcatattttagtcacgtgactttggtaggaaatcctt
ccaaacctaggcttcacttttcgataaaagccgcaaatctagcccttcgg
gctttacagatctgtgggtgGATCCTATAgaagccattttgaaaaatgta
attgTTTAGAGGAAAACATACTTTAAGTATAGAAAGTTTGACTTGCTGCA
AATAATTTCTTTGAACAAGTATGAGTAGATTTATTGAATATGACCTTAAA
TAGGTTTTTCTTCACAAAGCCCTTATGCCCCCTGTTTAGGAGGTCCATTT
TAAATCCAAAGGGGTAAGGTTTTATATGTGCCGGATTTCCAAAGGGATAT
GCAAAAGTCtgtcaaaaataattgaaattccATTGAGATGCCTTTTCAAA
TCTTACAAGAAACTCACAATTCTATAAGGTGTTAAACGtcaaaattgcct
ggaatttcAGGAGTTACGGGCGCTTCAAGCCACAAAGATCTCCTCAACAA
AAGGTATAAGCTTTTTCTCTGGATGGAAAAGCTCAATGAAAGCTCGACTT
AAAAACCCTCCATTGCTTTTATTTTGTATTATGAAAGCATTGATCTAATA
CTTTTGCTCTTGTTTATTATTTCAGTTGGAGCGCTTTTGTCTCGATTCCC
CCGATAAATGTCCTATCTCCATTGATGAAGAAGCTCTCAAAATATTCTGT
CAGATCAACACTTTTAAATGTCTCCAAGCGATGCGTGACTCAATTGAAGT
AAGCGTGTGAATACTAGTGGGGAGGGGCTTCGTTATACCGATAACTTTTT
CGCTCAAATACCGATTTACCGTTCTAAAAAAGGCATATACCGACGTACCG
ATATCCCGTACGCCCCCATGTtataaatcactcgaaaaagaaactgtttt
gatgtttagatttttccGTTGATAATTGTTTAGGTATTCCCATATTAGTT
TTATTTTAATCTTTTCGTAcacattttatgatttttactgAAGGGAGTAC
TTTGATCAACAGACTTTCTCTCCCCCTCTCTTCTAGAGTCACTCTTCCAT
TTTTCCTACCGCGAGCCGAAATTGAAGGAACTATCTTCggaattttcctt
gaaaataatTAGAATATATTAAATTGCCTAAAAATGAGACTTTTGCGATA
TGGGGGTCTTTTAAAATGACCGCTTATATTGTAGTTCATTAATCATTGAT
CATGAAACTTTATTATGCTCCCGACTTGGGCTTTTTGACCTTCACTCTAA
AAAGTAGACTTTTAATTCGCTATATGTTTTTCATTCTATtgcttttcatt
ttcaggatttaTCACACGAtgttcaaaataaagaaatcgaaaatgatgtG
GATTCGATTGATGACTTTTATTCAAGAGGTTTGTACAAACTTTCTTCCCA
ACTTGATCTCCATTTTAATGGAGGGCTTACGgcttgattttcattttatt
agagGGAGATAAAACTATTACGAAAAAGTTACCCTTAGAAAGACAAAACC
GGCGAAAAACTTTAGAGAAATAGTTCTCGAATAATTACCTAACCTTAGGA
AGTAGTCTTATCTTGAACAAGGACGGTTGAAAAACTGTAGAAACCCCGCT
CGTCGCTACGAGTTATCTACTGACGCTAAACCTCGCTATTTGGCACGTAA
ATTCAGACCGGTTGATGAATGGAACgcacggggggggggcacttgatttc
taaacgacggcatgtgccgccaaagaaaatggcttttaaaatcggaccct
tacagtacagCCCTTGAGAAGTGAAAAGGTATCTTTACAGTGCATTTAAC
CGAACGTTTCTGACCGTTaaagtgtagtttgatttcatatcttattttaa
ACGAGCCTGTGCCGTCAACACGATATGTAAAACAAATCATTGCACtatat
caaaagtacacccttacaatgcatttAACCGACCGTtcctgacccttaca
gtgtagttagATTCCATATCGTATTTTGTtgaagccacctgaaaatgGGG
TGTCGTCAAAATGtgcaaatcaaatcaaaataggTGGCAGTCAAAACTAT
AATATAGATACATCAGATgtttactgtcagacttgcaattcagcACCCTT
ACATTGTATCTAGCTAAAAGAACACTCTTGCAGTGCACTGTATCAAGAGT
ACAAGCTTACATATTATATATAATTCGAAGATCTCGAAAAatctaccctt
aagggcgggaCATGTCGTGGATCGGACCATATGagtttcgaaaacaaaag
tttgaTAAGAGGGGATTTGCATTAAACTTTCGAAAATAAGAGAAACAAAA
AGGATATTGCAAAACTTCATTCtttaaatacattttaaatcttttaaatc
TTCCTCTCTTGAAAGGTAACCAGTTCTAAACTTGTGCATTGAACGTAAAT
TTACAAGGTGGCATCCTTTTTCTGTACTATGCTCATCCTCAAACAGTTTC
AAATGAATATATCGTaatagaaaaaagttgaaaaaccgAAGATGGAAATT
CTAATAATATCCGTATCTATACTACACAAAAAAGATTCACAGAAAGCCGA
GATTTATTTAAACCACCAGCCCACAGAGATTGACCAAAACGTTCATCCAA
CGTTCTATAGACATCCCGTACGCTAAATGAATGTTGATTTGATGTTATGT
GACAACTGGGAAAGGGAAAGAATATTTCAGTAACCAAAAACTTTTTAGGT
TTAGTCAATGTGCCGAAACTAATAATGGAAAAATGTTTaataatagaaaa
taaaatgattcacatatttgattttttaggACTAACGAAAGATAAATATA
AAGTCAACATATGGGACGTCCTTGGTAGGTGATACTTAGAAGGGTGGTAG
GCGGGGTTCGCAATAGAGAATGTCTTTTTGGGACGAGATAGAGTTTTCAC
AAGCTCTTATtggggcccccccagcggtttgcgtgaatgtgtgaatgggc
attttcggttgcgtgaatgcgtgaaaattgggaaaaaaatgcgtgaatgc
gtgaattgaaaaaacttgcgtgaacgtgaaaattcactttttgattgcgt
gaatgcgtgaatctgggctattttgtgcgtgaatacgtgaattttccctt
ttttccaccaatcatgtgcagttttcccgattttccaatgtttccccgat
ttttcccgaaaattttccaatttcctgtaaaatcgggttattgcgtgaaa
ctggaggaaaatttgcgtgaatgcgtgaattttgaaaaaaaattgcgtga
ttgcgtgaattgagggtccgctggggggcctccttatttgatttggttgg
tcgttaaccagtactATAaacaatacactcttctcgagatgcataaattt
attgttgtcctcgttttcaaacagatttcattgctatgaaattatacatt
taaaccaattcgaattcccaaaaggcaaacattaactctaaaacaaaagt
acttgaaattcaaaatgtctcatgaggtgtaaacaacacaattatcattg
tgaatatgtaattttagagcaatgaaatctgtttgaaaacgaggacaaca
ataaatttatgcatctcgagaagagtgtattgtgttactttttctaaaga
atgcgtaatttttttttacttcaaatgaccaatttttaaagtcttataaa
aaaaagtccaTCTCATCTGGTTGTTTTTCGATGTCTTAAATTTCTTGGAA
AGTTTTTACCCTAAAAAGTTTGCTTTtgaggttttgaaaattttcagtaa
TGCACTCCGCAACAGAAATGGGTATCACAGCGTATGAAAAATATACTGTG
AAGACACAGCTAGATTTTCTTCAACACGCACTCAGTGAATATTAAGGTAA
CCAGCAATTATCCAAGATTCTTTTGAATAAGGGAACTCATTTCTAGAACA
ATTTCAAATCTCAGACGAATTTAAAAAAGCTATGTACTCTCATCTTTGAT
GCTTTGAATAGTAatgtaatacaccttttcgaccgtagccgccaatttcC
GTGtaggcattttttgtccgttttaccaccctaaaaccgtcccagtcttt
ttttcgcacctaatcgattggatcgagtttagggtggtaaattaaataat
gaagtggcacgcgcctgaccacgcgactacggtcgaaaaggtgtatcgaG
ATGCGGAAGAATTTTTATAGTACGTCTCCACAAATTAATTTCGTAAAATA
AAAAGGTAAATATTAGCGCTCACGGAATTTCATCTACTTATTCAAAACAG
GAGATGCAAGTGAAAAAGATTATCCAGTGAAATATGTCGAACTTTTAACG
AAACTCGCCGCTAAACAAAATCAACAACGAAACAAGAGATTCATGACGTT
ATCAAAATCAGGTATGTGTAGACGAACTAAATTTAAATAGTTTGAGTTTT
TAGACAGGATATTTATCTAAAAGTGACGTCTCTCTGGGTTAAAACATTTG
ATCGTAGAATTTTTACACACccatttatgacaaaaaaattgtagtAGTTT
ATGGGAAAGAAATTGATAGTTTGGATGGAGGAGTAGAATCTTCCCTTTCT
TTGTCCGGGATGACGGATTTCAATTGTGAGGCTTTCGGAAACGGAAAATG
TGACATTTCTATCCGGAAAACagaatatcggggaaaaatggCCGGAATTT
CGTTATTCGGCCACCcaaatagcaaaaaaattttgatggtgAAATTTTGG
CAGAATAGCGGGCTTCACCAGGAACCCGCCTCCTCCTCCGATATTATCCA
AATCTACCATCAAATACTTAACCCCAAAAGAGTAGTCACTAGTTCTTTCG
ACATTCATAAAACCCAGATTGCCAAACACGAGTCTTCGTTGTGTTAATAC
gagggaaaaaagtttttttttgcttcaacAGTTTTTCAATGTTAAATCAA
GACGAATTAGCAAGCTTATTTTTAACTGGTTTTGaatttctgtgtttttt
ttccaGATGGGTCTGAGCTCGTCTTGTTTTGTTTCTCTGTTTGTATTTTA
ACTTCTGTAACCACACTAAACTGGCTTTTCATTCGAAGATTTCCCGATGA
AGCAAAGCGGAGAAATTtccctgaagaaaaaaaattcacatatatactaa
aactgaaaataaaaatattactatCATATTTTCGTGcgaaaaatctatga
aaaaggGTGCACAAGTATTTCTCATTGTACTACTTCATTAACACACCCCA
CGCGGGCATTTTGTTGTCTatgttttaccaccctaaaaccgtcccagtct
ttttttcgcaactatagagaATAggaaaaggtgtcaaaaaaggattggtt
cgagtttagggtggtaaattaattaataaagtggcacacgcctgaccgcg
cgactacggtcgaaaacgtgcatttcataggattcgtgtttttttggtac
atgatatttttctacgtcactgcagtaatctaCTTTTTATGGTTAAGCAT
TCCTTTCCGAATCGAGATTATAagttttacaaaagaaaaaaacaaaggaa
aagagTTCTTGAATTCCGAATTCGAATGAATGATgacagaaaatcatttt
ttcaatgttCTCGAAAGGAAATGTGTACAGATTTGTGCATTTTCCCATTT
AAATTGGATAGAAAATAACATGTAACAGGTACACAAATCATAAGAAATAG
CTAATCTATCACTATGGTATGACCTCAATGTTGAATCCTTTATTTCACAG
ATGGTAGCCAAACCCAAAGAGACTACCCTACCAAATACACAGATCTCGAA
ATACAACTcgcaaaacaaaaacagaagaGACGGGATGAAATGACCACACC
CCTCCAGCAAGCCATGTTTACAAAATGGCTACTAAATGGCAATATTCCAG
CAACTTCACGCAAAATCCCATTCCATAATGCTCATATACTGCCACGATTT
ACTTCAAGAAAAGACAATAAGTGGGATAAAGCAAACGATAGAGTCCCTCG
AAAAGTCTCACCAACTCATGGCTCATCGACACTTCCATCCTTTGGTGGAA
ACCTTAACAGAGGAAACAAAGATTATAAGACAAACAAAGCAGTGTTTGCC
GAGGCTATTGATAGAGCCTCTGGAAAAGTTCCGGCAAATCATAACTCAAT
TAAAACATCACCTCCCTTTGGAAACAAAGCCAAGACAAACAAAGCACGCA
ATGACGAGGATGAAGATACGGCAGCCAAAAATTCGGACAAAGATACAATG
GTATGGTTCTATTAAATAACTTTGAAACCCCTTTGAAACTCAAAAATCCA
TCTTGTTTTGATCAggactttttctttgaaacaagctaattcaatagacc
ttatcggagttttttatttttcaatgcattgtgggattgtttcgagtgta
ttacaatagaaatctcttaggaattcatcgagggaattctattgtaatac
actcgaaacaatcccacaatgcatcgcttttttataaaaatcaaaaactc
cgataaggtttATTAAGGCAAGTTTATTTATCATTACTCTAAGGTCtcga
ataaaaattttccccctttattaatttttgaaaatatttttagctatCAC
AAGCTGAATTGCTATAAATATCCTGATTTTAGcttataattaccttattt
gGGGGGTTTTTGGAGGTACAATTTCTAGCCCACCTCTTTATTTGGACTCC
CCAGTTtagtagattttgaaaaaaatccataccCCCTACCTTATGGACCT
TAGAGCAAACAAATTTACTGGTCTTTGTggggcaaaaatattttgatagt
CTGTCCCCTAATCATAGTCTAATGCCACTATCTCATAAATAAGACTTCGA
AATTATACCGTGGCAAATTTTCTTTCCCACTCTGGTAGACTTGGTGCATT
TATATTCCCCCATGTATACTATCCTCGTGACGTCTTCGCTCAGATGCCCA
TCTTGTAGTTATAAACTGTATCTTCTTCATATTTCGTTTAGAACATTATG
AAGCTATCAGACGATAACGCAAAGAACTCGAACAGCGAAGAGGAGATAAA
CGATTCTGCTAAAGTAACAAATGATTCCTCTAACAAAGCAACCAAAATCT
GGTTATACAAAATCCCTAGCGATGAAAATTCCATAGGTGTTGCTTCAGAT
CACCCTATCAACTTTTTCGAATTGAAAGAAAGGTTAGCCGGTCTTCCGAA
ACAAGTTGATATGAAATcaagaaatacaaaaaaaaaggacgatattgaaa
gtttgaaaaatgatgagaaaaatactttggatgaaaaaaCGATCGAAAGA
AGGGAACAAGCAATGGACcgtatcaaataa Coding sequence (CDS) from alignment at sc0000193_pilon:109308..116887+ >XLOC_045651 ID=XLOC_045651|Name=XLOC_045651|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2574bp|location=Sequence derived from alignment at sc0000193_pilon:109308..116887+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACTACGAAGAATTGGTTTGATCAATATCTCTTTTGCGGTTTTTTG
TTGGATGTTGATCACTTGGGTGTCCACTGCTCCCGGTATTAACCCTATGA
CACTACGAAGAATTGGTTTGATCAATATCTCTTTTGCGGTTTTTTGTTGG
ATGTTGATCACTTGGGTGTCCACTGCTCCCGGTATTAACCCTTTGGAGCG
CTTTTGTCTCGATTCCCCCGATAAATGTCCTATCTCCATTGATGAAGAAG
CTCTCAAAATATTCTGTCAGATCAACACTTTTAAATGTCTCCAAGCGATG
CGTGACTCAATTGAATTGGAGCGCTTTTGTCTCGATTCCCCCGATAAATG
TCCTATCTCCATTGATGAAGAAGCTCTCAAAATATTCTGTCAGATCAACA
CTTTTAAATGTCTCCAAGCGATGCGTGACTCAATTGAAgatttaTCACAC
GAtgttcaaaataaagaaatcgaaaatgatgtGGATTCGATTGATGACTT
TTATTCAAGAGgatttaTCACACGAtgttcaaaataaagaaatcgaaaat
gatgtGGATTCGATTGATGACTTTTATTCAAGAGgACTAACGAAAGATAA
ATATAAAGTCAACATATGGGACGTCCTTGgACTAACGAAAGATAAATATA
AAGTCAACATATGGGACGTCCTTGGAGATGCAAGTGAAAAAGATTATCCA
GTGAAATATGTCGAACTTTTAACGAAACTCGCCGCTAAACAAAATCAACA
ACGAAACAAGAGATTCATGACGTTATCAAAATCAGGAGATGCAAGTGAAA
AAGATTATCCAGTGAAATATGTCGAACTTTTAACGAAACTCGCCGCTAAA
CAAAATCAACAACGAAACAAGAGATTCATGACGTTATCAAAATCAGATGG
TAGCCAAACCCAAAGAGACTACCCTACCAAATACACAGATCTCGAAATAC
AACTcgcaaaacaaaaacagaagaGACGGGATGAAATGACCACACCCCTC
CAGCAAGCCATGTTTACAAAATGGCTACTAAATGGCAATATTCCAGCAAC
TTCACGCAAAATCCCATTCCATAATGCTCATATACTGCCACGATTTACTT
CAAGAAAAGACAATAAGTGGGATAAAGCAAACGATAGAGTCCCTCGAAAA
GTCTCACCAACTCATGGCTCATCGACACTTCCATCCTTTGGTGGAAACCT
TAACAGAGGAAACAAAGATTATAAGACAAACAAAGCAGTGTTTGCCGAGG
CTATTGATAGAGCCTCTGGAAAAGTTCCGGCAAATCATAACTCAATTAAA
ACATCACCTCCCTTTGGAAACAAAGCCAAGACAAACAAAGCACGCAATGA
CGAGGATGAAGATACGGCAGCCAAAAATTCGGACAAAGATACAATGATGG
TAGCCAAACCCAAAGAGACTACCCTACCAAATACACAGATCTCGAAATAC
AACTcgcaaaacaaaaacagaagaGACGGGATGAAATGACCACACCCCTC
CAGCAAGCCATGTTTACAAAATGGCTACTAAATGGCAATATTCCAGCAAC
TTCACGCAAAATCCCATTCCATAATGCTCATATACTGCCACGATTTACTT
CAAGAAAAGACAATAAGTGGGATAAAGCAAACGATAGAGTCCCTCGAAAA
GTCTCACCAACTCATGGCTCATCGACACTTCCATCCTTTGGTGGAAACCT
TAACAGAGGAAACAAAGATTATAAGACAAACAAAGCAGTGTTTGCCGAGG
CTATTGATAGAGCCTCTGGAAAAGTTCCGGCAAATCATAACTCAATTAAA
ACATCACCTCCCTTTGGAAACAAAGCCAAGACAAACAAAGCACGCAATGA
CGAGGATGAAGATACGGCAGCCAAAAATTCGGACAAAGATACAATGAACA
TTATGAAGCTATCAGACGATAACGCAAAGAACTCGAACAGCGAAGAGGAG
ATAAACGATTCTGCTAAAGTAACAAATGATTCCTCTAACAAAGCAACCAA
AATCTGGTTATACAAAATCCCTAGCGATGAAAATTCCATAGGTGTTGCTT
CAGATCACCCTATCAACTTTTTCGAATTGAAAGAAAGGTTAGCCGGTCTT
CCGAAACAAGTTGATATGAAATcaagaaatacaaaaaaaaaggacgatat
tgaaagtttgaaaaatgatgagaaaaatactttggatgaaaaaaCGATCG
AAAGAAGGGAACAAGCAATGGACcgtatcaaataaAACATTATGAAGCTA
TCAGACGATAACGCAAAGAACTCGAACAGCGAAGAGGAGATAAACGATTC
TGCTAAAGTAACAAATGATTCCTCTAACAAAGCAACCAAAATCTGGTTAT
ACAAAATCCCTAGCGATGAAAATTCCATAGGTGTTGCTTCAGATCACCCT
ATCAACTTTTTCGAATTGAAAGAAAGGTTAGCCGGTCTTCCGAAACAAGT
TGATATGAAATcaagaaatacaaaaaaaaaggacgatattgaaagtttga
aaaatgatgagaaaaatactttggatgaaaaaaCGATCGAAAGAAGGGAA
CAAGCAATGGACcgtatcaaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000193_pilon | genome | sc0000193_pilon:109308..116887 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 952-1290:7242 |
| Aaloc | 454-951:6003 |
| Aaloc | 343-450:4553 |
| Aaloc | 304-339:3088 |
| Aaloc | 295-300:3082 |
| Aaloc | 220-291:1606 |
| Aaloc | 97-219:926 |
| Aaloc | 1-96:1 |
|
