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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000187_pilon:18934..21528+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045647 ID=XLOC_045647|Name=XLOC_045647|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2595bp|location=Sequence derived from alignment at sc0000187_pilon:18934..21528+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACGGCCATTCTTGGTGTACCGAACAAAGTTTGACATCCGACAATGGTT
TCTTGTCACCGATTGGAATCCTTTGGTCATCTGGTTTTACCAAGACTGTT
ATGTCAGGTTAGTAATCTTGTATGTTCTATTCACGAAATGTGCTCAATAA
CACATAATACAGTTGAtgagttaaaggttttgtttttaaataagagtgat
atcgttcgcttactcgtcaattttaattcacaagctttttgatattgaat
tgacacagatgtggagcaagattgatcagaaagagaaaaggaaaacattt
tttccttatCAGCACtatataacaataggcaaacagtcttccttgtaaat
tcattatcAGTTCCTTAAAAAGCCGACCGCGTCGCTAAGGGTTGATAGAT
GTGTTGGTGCATGTTATGTTGGTTTATTTTTGGGTTGATAGATGTGTTGG
TGCATGTTTGTTAAGATTTGTATTTTGCATTTTCCTATAACTGTTACAAA
ATGTTACACCCTAACTGCTATGTTGATCTTTATCTCGAAttattgtccaa
aataaccCAATAATATTCGTAACCTGGAAACTTGATTTTCTCTGCTACGC
CATAGAAATATATGTTATTAAGCGTAAAGTCTAAACTTGCGCCAACTGGG
TACCGcacttagctctagtttagacggccgactttctgccctgcctattc
taattgttagagtaggcagaaagagggcacaaagttggttgttaaaatct
ttgcttggaaaggtttgaaagaagacattgcattgacgtcaaaagagggc
tatgcatcacTTTAGACAGCCCGCTCTACAGCCTGATTTAAAGTTGGGAT
AAAGTGGgttgtctaaagtcaatgcattgccctcttttgacgtcaatgca
atgtcttctttcaatcttttccaagcaaatattttaactgccaactttgt
gcccaccTTCTACCTATTCTAACagttagaataggcagggcagtaagacg
gccgtctaaactagagcttatcTTCCGTTGTTGTCTTAATTGCTCTGGTA
TGAATCATTTTTAATACATGTATTTTTCCGAGCTATAATTTCTATTTCCT
TTTCATATCCCACAGATTTTGTTCACAAGAATTCACTTTGGACAAGTTCG
ATCCGCAAGTTCATTTATCAAACAATTCCATACAAAAGCATTACCGCAAT
GGTATTCGATCTGACAAGCTTCCTGATTCTAATATGTGGTCTAGTGATGA
GTTCAAAACATATCTTCAAACTATAGGTAGGTAGCGAATAAGATTTGTAT
GTATAAAATGGTTTAGCTTAGTACCTTTTCTCCTCAGGTTTAGTTTATTT
CTAGTAAGAAGGCAAGGTGTCAACTAGTCAGTCACATAGCCATGCTCCGC
ATATTCAGACCCAAGTTTGTATCCCAAATTTACTCgtttttcaattatct
tttGAATAAGccaaaaatcattgattttcgaGCACTTTCGATTTAGGCTA
AAACATAGATTCTAGGCCTAAAatacaatgcccaaaatgagcaGTTTGGG
CATCGATTTAGAAAAATCGGTCAATGACCTGAGATTCTGTAAGGGTTAAG
CTGCcgaaaaccgaaaaaaaaacagagattGGAATCCCTTTCCGAGCGGA
GCATGGCTTTGTGACAGACTAAACTCGATTGTGGGTTTTTTACACAATTT
TACACAAACTTAAAAGGATAcgttctattttttttcaaactaaagGTAGA
TTGTAAATAtcatttgatatttattatACCAATGTTCATCGATAGCTTTT
TAAAAATGCCAAGAAGATCTTCTCTCTATCAGCTTATAAAAATAGCTGGG
TCTTCAACCTGAACTTTGTCAGACATAATTTAACTTTTCGTTGATTGTTT
TGCATTCCTGGATTTTTCTTGAGCTCCACTGAGCTGCAATTCATTTAGAT
CgctcaaaatttttgttaatttgtATAATTATAGACGTCAAACACTCGTA
ATGTATTATTGTATTGAAGAATAGCTGACTCAGCGTTATTTCAATTTTAG
GAAAAGATACATCTTGGGACAGTAAGATCTACCCTGGAATGAAATCCGCC
ATCATTGGAGCTTTACAATGCTGTCAAACGTCTTTAGAATATCGACGAAA
CTCTTTCGAACTTTACGGAGCCGATTTCATGTTGAGTGAGAATTTAGACC
CTTGGTTGATTGAGATAAATTCGAGTCCTGCTCTAGGGGCCAGTACGCCG
GTGACAAAGGAATTATGCCGGAACGTTATTGAGGACACGCTGAAAGTTGT
TTTAGATCGGAGGGAGAATAAACAGGCGGATGTTGGTCGTTTTGAACTTG
CTTTTCGGCAGCCGTACATTGCGCCACCCTCCTACATGGGGTGTAATGTC
TACATAGAAGGAAAACAGATTTCAAAACCGAAAGTAGCTAAAGCTCCGGA
ACCGAAGATTGAGCTTAAGAAATCCGATGATAATTGTGATGATACCGGAA
AAGAAGAAGAAGAAAGTATGGTTGCCGTAAGAACAGACATTAAAAAAGTA
AAATCTAAAGAGACGTGTGAAAATGTGAAAACCAAAACAACGAAA Coding sequence (CDS) from alignment at sc0000187_pilon:18934..21528+ >XLOC_045647 ID=XLOC_045647|Name=XLOC_045647|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1626bp|location=Sequence derived from alignment at sc0000187_pilon:18934..21528+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACGGCCATTCTTGGTGTACCGAACAAAGTTTGACATCCGACAATGGTT
TCTTGTCACCGATTGGAATCCTTTGGTCATCTGGTTTTACCAAGACTGTT
ATGTCAGGAACGGCCATTCTTGGTGTACCGAACAAAGTTTGACATCCGAC
AATGGTTTCTTGTCACCGATTGGAATCCTTTGGTCATCTGGTTTTACCAA
GACTGTTATGTCAGATTTTGTTCACAAGAATTCACTTTGGACAAGTTCGA
TCCGCAAGTTCATTTATCAAACAATTCCATACAAAAGCATTACCGCAATG
GTATTCGATCTGACAAGCTTCCTGATTCTAATATGTGGTCTAGTGATGAG
TTCAAAACATATCTTCAAACTATAGATTTTGTTCACAAGAATTCACTTTG
GACAAGTTCGATCCGCAAGTTCATTTATCAAACAATTCCATACAAAAGCA
TTACCGCAATGGTATTCGATCTGACAAGCTTCCTGATTCTAATATGTGGT
CTAGTGATGAGTTCAAAACATATCTTCAAACTATAGGAAAAGATACATCT
TGGGACAGTAAGATCTACCCTGGAATGAAATCCGCCATCATTGGAGCTTT
ACAATGCTGTCAAACGTCTTTAGAATATCGACGAAACTCTTTCGAACTTT
ACGGAGCCGATTTCATGTTGAGTGAGAATTTAGACCCTTGGTTGATTGAG
ATAAATTCGAGTCCTGCTCTAGGGGCCAGTACGCCGGTGACAAAGGAATT
ATGCCGGAACGTTATTGAGGACACGCTGAAAGTTGTTTTAGATCGGAGGG
AGAATAAACAGGCGGATGTTGGTCGTTTTGAACTTGCTTTTCGGCAGCCG
TACATTGCGCCACCCTCCTACATGGGGTGTAATGTCTACATAGAAGGAAA
ACAGATTTCAAAACCGAAAGTAGCTAAAGCTCCGGAACCGAAGATTGAGC
TTAAGAAATCCGATGATAATTGTGATGATACCGGAAAAGAAGAAGAAGAA
AGTATGGTTGCCGTAAGAACAGACATTAAAAAAGTAAAATCTAAAGAGAC
GTGTGAAAATGTGAAAACCAAAACAACGAAAGAAAAGATACATCTTGGGA
CAGTAAGATCTACCCTGGAATGAAATCCGCCATCATTGGAGCTTTACAAT
GCTGTCAAACGTCTTTAGAATATCGACGAAACTCTTTCGAACTTTACGGA
GCCGATTTCATGTTGAGTGAGAATTTAGACCCTTGGTTGATTGAGATAAA
TTCGAGTCCTGCTCTAGGGGCCAGTACGCCGGTGACAAAGGAATTATGCC
GGAACGTTATTGAGGACACGCTGAAAGTTGTTTTAGATCGGAGGGAGAAT
AAACAGGCGGATGTTGGTCGTTTTGAACTTGCTTTTCGGCAGCCGTACAT
TGCGCCACCCTCCTACATGGGGTGTAATGTCTACATAGAAGGAAAACAGA
TTTCAAAACCGAAAGTAGCTAAAGCTCCGGAACCGAAGATTGAGCTTAAG
AAATCCGATGATAATTGTGATGATACCGGAAAAGAAGAAGAAGAAAGTAT
GGTTGCCGTAAGAACAGACATTAAAAAAGTAAAATCTAAAGAGACGTGTG
AAAATGTGAAAACCAAAACAACGAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187_pilon | genome | sc0000187_pilon:18934..21528 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 721-810:2506 |
| Aaloc | 271-720:2053 |
| Aaloc | 109-267:1117 |
| Aaloc | 1-105:1 |
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