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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000388_pilon:222651..226157- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045611 ID=XLOC_045611|Name=XLOC_045611|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3507bp|location=Sequence derived from alignment at sc0000388_pilon:222651..226157- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTATTTTTCTTTAGGGATCTTATTTTTGTTAATTCCATTTGTCGC
AGCTTCAGGTAAAAGTTAAATTCCACTTATTAAATTCCGAACTTTTGGTA
TGTTTTTTCTTACTCTTGTTTATTTACGAAAATGTTTTTATTTTCAAATT
TTCAGGCCCGGCGGAAGCGGGGAGACTGGAGATTTCAGTCTCCCCACTCT
TGAGCAAAATGAGGTTTTTTCTCAAATTCCTAGCGAATTTTATCGCATTT
TTAGCCTTCAACCTCCTCACTTTTATTGTTGTTCCGCAGGGCCTGATTTT
CATATTTATTTTTTCCCTGTAGTCTTCAGAAAATATTTAAACCGTTGCTA
ATACCGTTTGTTTTATAGTTTCTTTTCAAAATTTGTATTCAAATCACCGG
TTCAATACATTTTTTCTTTATTCGATCATCAGTGTGCAATTCAGGATGTC
AACGAACATTCAAGAAATTGGGTTGTTTTGCATTCCAAGAAGAAACCACT
CCGAACCTGTTGATCACTGATCTGGTGGCCAATGAATTCACTTCTTCAGG
GATACTTATTGACCAGTCCAAGGATCTAGAGGCTTCCATTTTGAGGTAAA
GATAAGATGCTACATCTTATAAAATACTGAATTGTTAGATTTAGCTTATT
TTTAGCTATTTGTGATTTAGTCCATTTCGGTTAATGTTCACAGGTTTTTT
GATATCATTGTCATTTTCCCGTTTTCCTTTTAGCTTATTATGCAGATGTC
TCACCAAAACTAAAGCCATGGGCTACACCATCTTTGGACTAACCAATCGT
GGTCAATGCCATGCTGGTAACCAGGAAACCAAACTAAACAAGCTTGCTAA
AGATGGTAGATTTGCTCCGCCTCTTGCATGTTCGAATACCAATAAAGGTT
TATGCAACGTTTTAAATGAAACGGAAAATTGTTTTGGCAAAGATATGCAT
TCATTTTATTATCAGGTCATGAAGACAGGTAACTTTTACCCCTGTACCTT
TTTTTCATTTGAACTATGTTAATCACTACTATATAGTTTTCTAAGAATGT
AATATTGTTGAATTATTGCGTTTGTCCAAAAATAAGTCAAAAGGATGGTG
TATTCTTAATGACTCATGACCACTGACCTTTATATACCCTGGACAAAGCT
TCTCAATCCCAGCCAAGCAAAATCTTTGATCGGTGTTTTTTCAAAATTGG
TACCCTAATGTCGACACTACTCGATAGCGGTGTAAATGCATTGAGAGCGC
TAGGTCTACTTTTCCTCAAATTCTTTTGATGATGTAGCGGCGTTAGACGT
TAATTTTTAGCATTGCAATGGCTTCTCCTTGGGTACCAATTCTAAAAAAA
CTCCAATCAAAGATGGCAGATATTGCTTGGTCCAGGGTTATATAAAGGTC
AGTGCTCATGACTGAAAGGTTTGGGCGACGTCTTATCTTCAAGCAGGTTC
TGCGGCGCAATGCACTTATCCACTCTAAAGGCCATAGCTCCGTAAGAGAA
TCTCCCAAGGTTGGCGCACCGCTTTGAACTTTTTGATCCAGTTTTGGGAT
AAATACTTAAAATGAGCTTTTGAGCCAAAAACACGTCAATTATTAACAGA
AACATTAGAACCCAGTCGCTTTCGGTTTCGTGTTTAAGTAAAAAGCGACT
ATTGAATGTTTTTGCTGAACAACTCAGGTCAGATCATCACAATCGCCATA
TTCCTTTAAAGCTGAGCGCGGTATGCGCCGATTGAACGATCTGTTATGAG
ATTAGAGGGGTAACGCCCAACTCTTTTGTTAAACTTCAGACAAGAAATAA
AAAGTGTGATTTGATACCTTTAAAACATTCCAAAACTTATTGATGTCGCT
AAAAGATAAACCTTGCCGAAAGAAAGCTTCCCAAATATCCTTCAGTAGTA
AAGTCTCATTTTATACATTTTCTTTACAGTCGATGGTCAATGGGGTTCTT
GGTCCCTCTTCACGAAATGTAATACGACGTGTGGAAAGGCTTTTAAAACG
CGTCAACGATCGTGTGACCAACCTAAACCTCTGTATGGGGGCAAGATGTG
CCAAGGGCCTTCTGTTGAAGTCCAAGAATGTCATTTGGGTGGATGTCCAA
GTAAGTTAATACCGAATATAGCTCAGTGGGAGTTTAATAAATGGAGAATA
AATGAACGGGTTGAATGACTACGAGAATATAAACCACCGGTCTGAGTCAG
AATTTCAAATTCTACTCTTCATAACTCAAAATTTTAGTGTCTTCCAGTGT
TTTTGGTGGTTCTCAACTTTTTAACCGTAGGCTAAGCTGCTTTGCTGTAA
AAAATCTCTTCGTCAAAGTTTCGCGATTTTCGCCTCATTGCCTCATCCAT
TGCTTCGAGAAGCTATTTTCATATTCCAGCAATTGATTGTAATTGTTAAT
AGGTAGGGGGTTGATCTGCGCAAAGGTGGTTAGTATTCTTTAAATTTGCA
CTCTTTAACACTTTATCATTCTTTCCAGGAGACGGTGGATATACAAGTTG
GTCAACTTTCAGTTCATGCACTTTATCTTGCGGTGGAGGTGTTCAAAGCA
GAACACGTTCTTGCACTCAACCACCACCTTTGAATGGAGGGAAGAAATGC
TCTGGTCCTTCCAGTGAAACCAAGGCTTGTAATACACAACCTTGCCCAGG
TATTTCTACATAATATTTTTTCAGTTTTAATTCCGATCAAATTTGAAATC
TGTGTTGTATAAAATGTATGAAAAGATTCTATCAATTTACAACATTTATC
CAAGCCAAATTCTTTCTATTTTATGCTAGTGGTTTCGTACCAGAAAGCCT
TTAGGACAAAACTTTGGAAAATCTTTTTACCTAAAAAGCACATAAAGGTT
TTTTGGAAAGCTGTGCCTTAAGCGTCAAATATTCTCCCTGTACTACACTG
CAACTTATCAAACTTTTTAGCACCTTGGACTTGCCAACAGAAAACTACGC
AATGGGATGTAGATGGAAATGGAGATGCTCGTTATTTCGATCGCCATCAA
TTGACATGTCCTTCTGCAACCGCTATCAACCTCCTTCGTCTCGAACGAGA
TAGCACTCTCACCAAATATCGATTTGTATACAAGTGCTGTTCCATTGGAG
CGACAGCATGCAACTCTACAAAATTGACACGCAACAGCTTTTCATATGAT
GGTACAGGGAGTGCGCGGTATTTAGATCGCCAATATGTCGAGTGTAACAA
GCATTTGATCTCTTCTTTACGTCTTGAAACCAATCTATTGAATTTCCAAG
GTGACAAAATTCGTTATGTCTACAACTGCTGTCAAGCACCCAATCAACAC
CGAACATGTTACTCGGCCATGACGAAATTCTCCGACGATGGAGGTGGCAG
TGCCATTTATCTTGATCGACAAAAGATCGAATGTAACCGAGAATTTTCGT
TGTCGGCATTTCGTCTGGTGAGGGATACAAACACAATGAAACATTGGAGT
TATAAATACACTTGTTGTAAAACAACACCTAAGTCTTTGGTCAAAACTGT
TGTTTAA Coding sequence (CDS) from alignment at sc0000388_pilon:222651..226157- >XLOC_045611 ID=XLOC_045611|Name=XLOC_045611|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2790bp|location=Sequence derived from alignment at sc0000388_pilon:222651..226157- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTATTTTTCTTTAGGGATCTTATTTTTGTTAATTCCATTTGTCGC
AGCTTCAGATGGCTTATTTTTCTTTAGGGATCTTATTTTTGTTAATTCCA
TTTGTCGCAGCTTCAGTGTGCAATTCAGGATGTCAACGAACATTCAAGAA
ATTGGGTTGTTTTGCATTCCAAGAAGAAACCACTCCGAACCTGTTGATCA
CTGATCTGGTGGCCAATGAATTCACTTCTTCAGGGATACTTATTGACCAG
TCCAAGGATCTAGAGGCTTCCATTTTGAGTGTGCAATTCAGGATGTCAAC
GAACATTCAAGAAATTGGGTTGTTTTGCATTCCAAGAAGAAACCACTCCG
AACCTGTTGATCACTGATCTGGTGGCCAATGAATTCACTTCTTCAGGGAT
ACTTATTGACCAGTCCAAGGATCTAGAGGCTTCCATTTTGAGCTTATTAT
GCAGATGTCTCACCAAAACTAAAGCCATGGGCTACACCATCTTTGGACTA
ACCAATCGTGGTCAATGCCATGCTGGTAACCAGGAAACCAAACTAAACAA
GCTTGCTAAAGATGGTAGATTTGCTCCGCCTCTTGCATGTTCGAATACCA
ATAAAGGTTTATGCAACGTTTTAAATGAAACGGAAAATTGTTTTGGCAAA
GATATGCATTCATTTTATTATCAGGTCATGAAGACAGCTTATTATGCAGA
TGTCTCACCAAAACTAAAGCCATGGGCTACACCATCTTTGGACTAACCAA
TCGTGGTCAATGCCATGCTGGTAACCAGGAAACCAAACTAAACAAGCTTG
CTAAAGATGGTAGATTTGCTCCGCCTCTTGCATGTTCGAATACCAATAAA
GGTTTATGCAACGTTTTAAATGAAACGGAAAATTGTTTTGGCAAAGATAT
GCATTCATTTTATTATCAGGTCATGAAGACAGTCGATGGTCAATGGGGTT
CTTGGTCCCTCTTCACGAAATGTAATACGACGTGTGGAAAGGCTTTTAAA
ACGCGTCAACGATCGTGTGACCAACCTAAACCTCTGTATGGGGGCAAGAT
GTGCCAAGGGCCTTCTGTTGAAGTCCAAGAATGTCATTTGGGTGGATGTC
CAATCGATGGTCAATGGGGTTCTTGGTCCCTCTTCACGAAATGTAATACG
ACGTGTGGAAAGGCTTTTAAAACGCGTCAACGATCGTGTGACCAACCTAA
ACCTCTGTATGGGGGCAAGATGTGCCAAGGGCCTTCTGTTGAAGTCCAAG
AATGTCATTTGGGTGGATGTCCAAGAGACGGTGGATATACAAGTTGGTCA
ACTTTCAGTTCATGCACTTTATCTTGCGGTGGAGGTGTTCAAAGCAGAAC
ACGTTCTTGCACTCAACCACCACCTTTGAATGGAGGGAAGAAATGCTCTG
GTCCTTCCAGTGAAACCAAGGCTTGTAATACACAACCTTGCCCAGGAGAC
GGTGGATATACAAGTTGGTCAACTTTCAGTTCATGCACTTTATCTTGCGG
TGGAGGTGTTCAAAGCAGAACACGTTCTTGCACTCAACCACCACCTTTGA
ATGGAGGGAAGAAATGCTCTGGTCCTTCCAGTGAAACCAAGGCTTGTAAT
ACACAACCTTGCCCAGCACCTTGGACTTGCCAACAGAAAACTACGCAATG
GGATGTAGATGGAAATGGAGATGCTCGTTATTTCGATCGCCATCAATTGA
CATGTCCTTCTGCAACCGCTATCAACCTCCTTCGTCTCGAACGAGATAGC
ACTCTCACCAAATATCGATTTGTATACAAGTGCTGTTCCATTGGAGCGAC
AGCATGCAACTCTACAAAATTGACACGCAACAGCTTTTCATATGATGGTA
CAGGGAGTGCGCGGTATTTAGATCGCCAATATGTCGAGTGTAACAAGCAT
TTGATCTCTTCTTTACGTCTTGAAACCAATCTATTGAATTTCCAAGGTGA
CAAAATTCGTTATGTCTACAACTGCTGTCAAGCACCCAATCAACACCGAA
CATGTTACTCGGCCATGACGAAATTCTCCGACGATGGAGGTGGCAGTGCC
ATTTATCTTGATCGACAAAAGATCGAATGTAACCGAGAATTTTCGTTGTC
GGCATTTCGTCTGGTGAGGGATACAAACACAATGAAACATTGGAGTTATA
AATACACTTGTTGTAAAACAACACCTAAGTCTTTGGTCAAAACTGTTGTT
TAACACCTTGGACTTGCCAACAGAAAACTACGCAATGGGATGTAGATGGA
AATGGAGATGCTCGTTATTTCGATCGCCATCAATTGACATGTCCTTCTGC
AACCGCTATCAACCTCCTTCGTCTCGAACGAGATAGCACTCTCACCAAAT
ATCGATTTGTATACAAGTGCTGTTCCATTGGAGCGACAGCATGCAACTCT
ACAAAATTGACACGCAACAGCTTTTCATATGATGGTACAGGGAGTGCGCG
GTATTTAGATCGCCAATATGTCGAGTGTAACAAGCATTTGATCTCTTCTT
TACGTCTTGAAACCAATCTATTGAATTTCCAAGGTGACAAAATTCGTTAT
GTCTACAACTGCTGTCAAGCACCCAATCAACACCGAACATGTTACTCGGC
CATGACGAAATTCTCCGACGATGGAGGTGGCAGTGCCATTTATCTTGATC
GACAAAAGATCGAATGTAACCGAGAATTTTCGTTGTCGGCATTTCGTCTG
GTGAGGGATACAAACACAATGAAACATTGGAGTTATAAATACACTTGTTG
TAAAACAACACCTAAGTCTTTGGTCAAAACTGTTGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000388_pilon | genome | sc0000388_pilon:222651..226157 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 811-1395:586 |
| Aaloc | 640-807:1028 |
| Aaloc | 469-636:1577 |
| Aaloc | 223-465:2774 |
| Aaloc | 61-219:3074 |
| Aaloc | 1-57:3508 |
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