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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000278_pilon:179632..184235- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045559 ID=XLOC_045559|Name=XLOC_045559|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4604bp|location=Sequence derived from alignment at sc0000278_pilon:179632..184235- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGAAATTAACAGCAGATTTAATTGAGATTGCTCCACAGTATACCAA
CCCTTTGAGAGATCGTGAAATTGATTTACGTGGGAACAAAATATCTGTCA
TTGAAAATCTTGGCGCAACTCTTGTAAGTTTTATCTTATCTTGATGGTTC
TTTCAATTGTATTTACTGTAAATATATGAATGATGGCCTAAATTCTGACA
GCTCAAAATAATATCAATCAGATAATTTAGCTCCAAGGACATAATCAGTT
TTTGGTCCACCGTATTAATGACTGGATTACATATCAAATTTCTCGGGTTT
TTGCTTTTTAGGCTTTCTCATGCCAAAAATGTTATTAATCTCTCAGTTCC
ATCTATCTGTTATGATGTATTTAATCTATTTTTCAGGATCAATTTGATTG
CATAGATATATCAGACAATGATGTCAAGAAGTTGGAGTCTTTTCCACTCT
TAAAACGTCTCAAAATGCTCATCTGTAACAATAATAGAATCTGGTGAGTG
ACTGGCTTGAGTTTTGATTTATTTTACTTAGACTTAGATGCGTTATCTCT
TATATGAAAAAATGCTTTTGAGGTCTTTTTAAGTTTGTACTGCTCTAGGT
TTGTTTGCTTATTTCTGCAAACTTTAGGGAACGTTTCGAAGATCTTTTAT
GTAGGCTTCATTCTACCCTTATTGTTGTAATTATTATCGTTTCCTCTCAA
GCAAGTTTGTGACTCGACTGATACAATATTCATTTAAAAACCACCAACCC
TTATGTATTTTTTAAGGTTAGATATATATTGACGGTGGGTAAAGGTAAGA
ATTTCAATTTTCCTGAAAACATTCGCGAAAGCGAATACATCTGGCGTCAC
CCAAATTTTCCTTAACAAACAATTAAACGCTGGTTATTTTGTCAGATGTT
TTTACATAGATCATGGTTTGAATAAAATGAGATCTTCCAACTGGTTGGAA
AGGATTCGGACTGAGTCTGAATAATTTTCCTTGAATTCTGATTCTTTTAC
AGTATTTAGTGGCATATTTTACACTATGCTTTGGCATTGGTAGCATTGTT
TTGAACTATTTCCATAATTTGATTTTTACCATCGATTTTGTCGTTAATGT
TCGCTACTTTTTGGGTTCAGGGGTTCAGATGTAAAAACTTTTCTACTGGA
AAGGTGGATTTCAGTTTTCATCACAGATCTATTTTGCTTCTTAGAGTATA
ACGTATATTTCCTTGAAATTTTGTTTCTTTTCAGGGATATTTTGTTACTT
CCAGGTTTTTTCACAGTGTAAGCAAAGACTATTGAGACGTGCAGAACAAG
CTTGTTTTCATCCAAACTAAGCTGACATATCTTTTCAAATCTATGTGGTC
TTTATCAGTTTTTTTTTAATTTTCCTTCTTCTTTCAAACGGCAGTCGTTT
TGAAGAGAACTTGGAGGAATCACTACCAGTTCTGGAAGATTTGGTGTTGT
CAAATAACAATGTACAAGAATTGGTATGAATAGATTATTCAATTACATCC
AGTCAACCCTCCTTAATCTACAAGGGGTTCGGGTTCAAACGGCGTTAAAT
GAATGTTTGTCAGTGTGTTTGTTTGCAATGATTTCAGACTTTTTCCCTTG
TAAACAGGAGTGCAAACCCCTTTTGACGCAGCTGTTTTTGTTGTTGCAAC
GGATTGATGGTTGTATTTCATTTACCAAGCATTTTGCATTTTGCTGGATT
TCACGATCTCATCTCTGAATGATTTTTAACGAACTGAAGTTGTGTTTTTC
ACATAACTTGGCTCATGTTTCTCAGTTGTATTTCTGTTTTAGCCTGATAG
GTGAATTATCCTGGACATCTCTGCTCAAACATCATCGTTTCTCAGTTGTA
TATCTTTTTTTGTTTTTAGATCGATTTAGACCCATTGTCAACGATAAAAA
GTTTACGTTCAGTATGGTATGTATTTCTTTTCTTTCTCTTTCTCTTTCTC
TTACTACAGGTTTTACAAAGCTTTTTTTATAACAACTTTTGAAGCCTTCG
GATTTTCTTAACTTTTTGAGTTTCAAGCCTAAAAATGTTTTTAAAATGTT
CTTAAAAACTTGTTCTTAACATTTTGGCCATCGAAGCCTTATGTTCTTAA
TAATTTGTTTGTTCTCATAAAAAAACGCGTGAAGAAAAACATTGACGAGT
TTAAAGGTTCAGAATCTGCAAAATATAGTATACCCGTCAGTCGATCGTTA
TTTCTTTGACTACCCAGCTCACAAACCTTTGTATTGTAACCGACGAACTC
TTCAAAAATTAAGCTTTCCATAACAAAAATGCTTAGCTTTCCTAAAATGA
GTACTTTAGTTACGAAGGTAGGACTGTAAAGTTGTCTGCTAAACAGAAAG
CGAGTTTTACCGCAATAAAAATGAGTTCCAGAAGACTTTGTGTGTGGATT
TGATGTGATTAACAGAGTTACTACTTACTGAGGCTATAAGCATACCAGGA
TAACACAACGACGAACGAAAAATGGAATAGGCTAGTAAAAATAGGAGATT
TAATTGGTTGAAACTCACTAGCCTGTTAAATTTTCGTTCATCGTCGTGAT
TTTACTGATTTAACTTTACTACTTTCAATATTATGTAGTATGAACTATGC
TTGACTTTTATATTTTGAACTTTTTTGTTCTAGCTTCCTTCGGAATCCAG
TTGCAAATAAACAAAACTACCGGCTATATTTGATCTTCAAAATCCCTCAA
CTTCGCGTGGTCGACTTCAAAAGAATAAAAGATAAAGTATGTTCTGTTGC
TTTTGTAACTGTGAATTTTTCACTCCAACCAAATGAGAGAAAATTATGGA
AAGTACTGCAAAATATAGTGTATCCGCCATTAGTCGGACGTTATTTCATT
GTCTTCCCAGCTCACAAACCATTATAATCGACAAATCTCCAATAATTAAA
CTTTGATTGGAAAAGAATACTTATTCACGCCGAGTAAACATTACGTTTGC
ATTCTTTTCAATTTAAGATATTTTAGTACATAACTAAAAAGCTGAACGAA
GATCTGAAATCTTTTACACTATTTTACAAACGTCGAATTTTAATTTCTGT
CAAAAAGTAGAAAGAATAAGTTGGTTTTTAGGGAAATTTAAGAGGACAAA
ATAATTTCGTGGTCATACTTGGTACTATCTTACTAAATACAGCAAACTGT
CTTATTGTGTCTCCCTTTTATTTTCCTCCTTCTTTTATTCATTTTTGTTG
ATTTTACTGGATATGTCTTTTAAAATGTTTTTATTCTTTATTTTATGTCC
TTTTGTGTTATCATTTTTTCTCGAAATAGGTATTGACGCTAGCTAGTAAA
GTTCAATGACATTGAATTTCTTATATTTCTGTCTCTAAAGTGATGAATAA
TGATTTTACCAATATCTTACTTTTTTTCAGGAGAGATCGGCAGCCAACAG
ACTCTTCAAGAGCAAGAAAGGGGAGATTTTACAAAAAGATATTGCTGCTA
AACGTAGTAAAACGTAAGAAACAGTTTGGGTGTTTCCAACAGTCAGTGGA
GTCTGTTTTAAGTGGAAACTTTTTTTCATTCAAATGTCTGCTTAATTCGA
ACAAGTTTTATGGTCCCTTCAGTTAACAATACCATCTCACTCCATTACTC
GAAATTTCCTTAACTCAAACATACATTTGCTCCCAGTGCGTGTTTGAGTT
ACGGAGACTTCACTGTACCGACAAAATCAATTACAGTTTATGATTCTTTT
CTTGTGATCATTCTATGAAAGCCTCAGTACGTTTGCCGAACATACCTCCT
CCCCCCTTCGAATATGGCCGCATTAGAACGTTAGTGAAACATCATTAACT
ACGAAAGTCATGCCAATCTCTCTATCTCTTAACTTATTTTATCCGTTTTC
ATCATTATCAGATTTGAAGTCAAAGATATCCAACCAACGCAAGAAGATGT
TGAATTTCTGGCCCAAAAATATAAAGACCAAGAAGCTATCAAGGTTTTTC
ATTCTATAATCAATGTTATAATAGTTAAAGTACTCTGTAGGGTCCTATCT
AGGTGTAAAATGAGGGGAAACCTTTCAAAAAAAATTCAAAGGTTTTTCCA
TTGAAAACGCTATGAGGCCATCTCTTTGCTGGCTAAATGGAACACCCAAT
GTACAGCGAGACACTACACGTCTTTTTTTATAAGGAACACGTTTATAAGG
AACTTGAGGCTGAGAATAAGAAAACAAGTTAAGGAACACCAAGAGTTAAA
ATTGAACTTGCACACGTTTACAAATTCCTAGACAAAAAATGATAAATATT
GATAAAATAACGTTCAATTGTTCGTCTTTTGTCAATTGTTCAACAAATCA
TCAAATCAGTCCAACCTTACCAGCTAAGTAAATAAGGAACTTGATAAGGA
ACTTCGAGGCTGAAATTCTCTGGAAAAATAAGGAACTCCAGGCTTGGATA
AGGTTCCTTATAAAAAAACGGGTAGTCTTTTCGTTGATAATTTGAACATT
TTCTTGATTTCTTTCGTAGGAAGCCATTTCTAAAGCCACCACACTGGAAG
AAGTTCGGAAATTGGAATTACTTTTACAGCAGGGCCACGTCCCCGGTAAA
ACAGGTGATGGAGATAACCAAAATGAAGACGAGGAAGAAATGGAAACAGC
ATGA Coding sequence (CDS) from alignment at sc0000278_pilon:179632..184235- >XLOC_045559 ID=XLOC_045559|Name=XLOC_045559|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1518bp|location=Sequence derived from alignment at sc0000278_pilon:179632..184235- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGAAATTAACAGCAGATTTAATTGAGATTGCTCCACAGTATACCAA
CCCTTTGAGAGATCGTGAAATTGATTTACGTGGGAACAAAATATCTGTCA
TTGAAAATCTTGGCGCAACTCTTATGGTGAAATTAACAGCAGATTTAATT
GAGATTGCTCCACAGTATACCAACCCTTTGAGAGATCGTGAAATTGATTT
ACGTGGGAACAAAATATCTGTCATTGAAAATCTTGGCGCAACTCTTGATC
AATTTGATTGCATAGATATATCAGACAATGATGTCAAGAAGTTGGAGTCT
TTTCCACTCTTAAAACGTCTCAAAATGCTCATCTGTAACAATAATAGAAT
CTGGATCAATTTGATTGCATAGATATATCAGACAATGATGTCAAGAAGTT
GGAGTCTTTTCCACTCTTAAAACGTCTCAAAATGCTCATCTGTAACAATA
ATAGAATCTGTCGTTTTGAAGAGAACTTGGAGGAATCACTACCAGTTCTG
GAAGATTTGGTGTTGTCAAATAACAATGTACAAGAATTGTCGTTTTGAAG
AGAACTTGGAGGAATCACTACCAGTTCTGGAAGATTTGGTGTTGTCAAAT
AACAATGTACAAGAATTGATCGATTTAGACCCATTGTCAACGATAAAAAG
TTTACGTTCAGTATGATCGATTTAGACCCATTGTCAACGATAAAAAGTTT
ACGTTCAGTATGCTTCCTTCGGAATCCAGTTGCAAATAAACAAAACTACC
GGCTATATTTGATCTTCAAAATCCCTCAACTTCGCGTGGTCGACTTCAAA
AGAATAAAAGATAAACTTCCTTCGGAATCCAGTTGCAAATAAACAAAACT
ACCGGCTATATTTGATCTTCAAAATCCCTCAACTTCGCGTGGTCGACTTC
AAAAGAATAAAAGATAAAGAGAGATCGGCAGCCAACAGACTCTTCAAGAG
CAAGAAAGGGGAGATTTTACAAAAAGATATTGCTGCTAAACGTAGTAAAA
CGAGAGATCGGCAGCCAACAGACTCTTCAAGAGCAAGAAAGGGGAGATTT
TACAAAAAGATATTGCTGCTAAACGTAGTAAAACATTTGAAGTCAAAGAT
ATCCAACCAACGCAAGAAGATGTTGAATTTCTGGCCCAAAAATATAAAGA
CCAAGAAGCTATCAAGATTTGAAGTCAAAGATATCCAACCAACGCAAGAA
GATGTTGAATTTCTGGCCCAAAAATATAAAGACCAAGAAGCTATCAAGGA
AGCCATTTCTAAAGCCACCACACTGGAAGAAGTTCGGAAATTGGAATTAC
TTTTACAGCAGGGCCACGTCCCCGGTAAAACAGGTGATGGAGATAACCAA
AATGAAGACGAGGAAGAAATGGAAACAGCATGAGAAGCCATTTCTAAAGC
CACCACACTGGAAGAAGTTCGGAAATTGGAATTACTTTTACAGCAGGGCC
ACGTCCCCGGTAAAACAGGTGATGGAGATAACCAAAATGAAGACGAGGAA
GAAATGGAAACAGCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000278_pilon | genome | sc0000278_pilon:179632..184235 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 625-759:136 |
| Aaloc | 544-624:743 |
| Aaloc | 460-540:1225 |
| Aaloc | 358-459:1971 |
| Aaloc | 310-354:2736 |
| Aaloc | 232-309:3210 |
| Aaloc | 124-228:4219 |
| Aaloc | 1-123:4605 |
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