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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000127_pilon:158644..160415+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045519 ID=XLOC_045519|Name=XLOC_045519|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1772bp|location=Sequence derived from alignment at sc0000127_pilon:158644..160415+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGAGGACGATACCACGCAATCTTCTGGTGACTTACCAACAATTGA
AGTGACCACTGAAGAATATGATATTATTGAAGTGTCAGAGCAAGTAGAAC
TTTCTGAACCAATTGTTATTGAAGATGATATAGAAGTTGACGCAGAGGTT
ATTGAACAAGTTGATTCAAAAGATTTTAGCCCTGTTACTGTTGTAATTGC
ACCTCCCAAGAATGAAATTGATGCATCTGATTCTCCTCAGGGAGAGGAAG
ATGCTCACGAAGCCgaggaagaggaagatgttggagaaaaagaaaatgag
aaagaagaggaggttgaaacgcaagaggaagaagCTGTAAAAGCGGAGCC
TAatattgaagaagaagaagaaggagaagaaaatgaTAACGGGGAAAATG
TAAATGATGAAACAACTGGAATCGACGATGTGGATATCGATTTGGAGGAT
GAAGATGATGATCATATCCAACCATCTGCACCATCCATCAGTCTATTGGT
GGACCATTCAGTGGATACCATCGTGgaagataaagaaagtgaagatgaac
aggaagaagttgcaaaagaaggaaaaaccgaagacattgaagatggagaa
gacagaaaagagaTTACTGTTGCTGAGGAAACTCCAAAAGAAGAAGAATC
TGGCAAAGATTCTCATGAAGATTCAAAACAACTTGAAGGCTCTGAAAATG
TGTCAGATCTTGTTCCAGTCGGAATATCTAGTCCATGTCCTTGTGATGAG
GACGACAAAAATGTCGAGGAAGTCGAAGATTCTATAGATGGTGAATGCAG
CTATGGCAAAATTCGTCTCTTATTCTTCCGCGAACCAGAAGACGATATTA
TGAATGTGAAGGTCTTTCGTGTTGATCAAATGCCATCTACTACAGAAGGT
GGTTCAAAAGATGTCAGTATCCATCTCTGCCTAAAACCAGCTTCCAAGCA
ACGATATAAAACAAAGATGAAATCAACATCTAAAGCAAGATTTGACGAAA
CGtatgaatttcgaaaaatcaaCAATAAAGCAATTGAATCTTCAACATTG
AGGATAAGAGCTTATGGTAAATGTAAGAAGATCATTGGTGAAGCTCATAT
TCCTTTATCAATGgtcaaagattttcaatatCAAGAAGTTTGGTATTACT
TCTCACCATTTGACAAAAAGGTATGTTTGATTTTAACACGTAcatctctc
tctctttctctttctttttcgatggccaaaatactaaaaacaagttaaaa
caCCCAGTTTCTTAGGGAATTGCaactcaaaatctcaaaaagctACAAAC
ATCCGAAGACCTAAAAAAtcttggatgctcttataataAAGGGCTAGATT
AGGGCCCCTATCCGATTATTAGCGAATGTGAAAATTAGTGAAATGAAAGC
TGTCTAAACCCACTACATGATTTGTggcctgtggttttgtagaggtctgt
gatttcCACTATGTATAGTAGAGATGGTCACGCGGTAATTGTAATCCTCC
TATCATTATATAATTTTGCAATAGTGGATTGATGATAGTATACTTGTACG
GTTTTCCAACTGTCTGAGACCCATATACAAAGTCATTATTTATGGTTAAA
ACTGGATAATCTAGGAGTTAGGTCCTACTTTTCTTTGACATTGTTGAGGC
TTTCATCTATATATTTACTAATccaccaaaatattttctcgTTTTAGAAA
TCCAAGACGAAGAAAAACAGTGAAGCTCCAGCAGTAGGAAAATGGTATTT
TGCAAAGAATGAATGACTTTAG Coding sequence (CDS) from alignment at sc0000127_pilon:158644..160415+ >XLOC_045519 ID=XLOC_045519|Name=XLOC_045519|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2490bp|location=Sequence derived from alignment at sc0000127_pilon:158644..160415+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGAGGACGATACCACGCAATCTTCTGGTGACTTACCAACAATTGA
AGTGACCACTGAAGAATATGATATTATTGAAGTGTCAGAGCAAGTAGAAC
TTTCTGAACCAATTGTTATTGAAGATGATATAGAAGTTGACGCAGAGGTT
ATTGAACAAGTTGATTCAAAAGATTTTAGCCCTGTTACTGTTGTAATTGC
ACCTCCCAAGAATGAAATTGATGCATCTGATTCTCCTCAGGGAGAGGAAG
ATGCTCACGAAGCCgaggaagaggaagatgttggagaaaaagaaaatgag
aaagaagaggaggttgaaacgcaagaggaagaagCTGTAAAAGCGGAGCC
TAatattgaagaagaagaagaaggagaagaaaatgaTAACGGGGAAAATG
TAAATGATGAAACAACTGGAATCGACGATGTGGATATCGATTTGGAGGAT
GAAGATGATGATCATATCCAACCATCTGCACCATCCATCAGTCTATTGGT
GGACCATTCAGTGGATACCATCGTGgaagataaagaaagtgaagatgaac
aggaagaagttgcaaaagaaggaaaaaccgaagacattgaagatggagaa
gacagaaaagagaTTACTGTTGCTGAGGAAACTCCAAAAGAAGAAGAATC
TGGCAAAGATTCTCATGAAGATTCAAAACAACTTGAAGGCTCTGAAAATG
TGTCAGATCTTGTTCCAGTCGGAATATCTAGTCCATGTCCTTGTGATGAG
GACGACAAAAATGTCGAGGAAGTCGAAGATTCTATAGATGGTGAATGCAG
CTATGGCAAAATTCGTCTCTTATTCTTCCGCGAACCAGAAGACGATATTA
TGAATGTGAAGGTCTTTCGTGTTGATCAAATGCCATCTACTACAGAAGGT
GGTTCAAAAGATGTCAGTATCCATCTCTGCCTAAAACCAGCTTCCAAGCA
ACGATATAAAACAAAGATGAAATCAACATCTAAAGCAAGATTTGACGAAA
CGtatgaatttcgaaaaatcaaCAATAAAGCAATTGAATCTTCAACATTG
AGGATAAGAGCTTATGGTAAATGTAAGAAGATCATTGGTGAAGCTCATAT
TCCTTTATCAATGgtcaaagattttcaatatCAAGAAGTTTGGTATTACT
TCTCACCATTTGACAAAAAGATGTCAGAGGACGATACCACGCAATCTTCT
GGTGACTTACCAACAATTGAAGTGACCACTGAAGAATATGATATTATTGA
AGTGTCAGAGCAAGTAGAACTTTCTGAACCAATTGTTATTGAAGATGATA
TAGAAGTTGACGCAGAGGTTATTGAACAAGTTGATTCAAAAGATTTTAGC
CCTGTTACTGTTGTAATTGCACCTCCCAAGAATGAAATTGATGCATCTGA
TTCTCCTCAGGGAGAGGAAGATGCTCACGAAGCCgaggaagaggaagatg
ttggagaaaaagaaaatgagaaagaagaggaggttgaaacgcaagaggaa
gaagCTGTAAAAGCGGAGCCTAatattgaagaagaagaagaaggagaaga
aaatgaTAACGGGGAAAATGTAAATGATGAAACAACTGGAATCGACGATG
TGGATATCGATTTGGAGGATGAAGATGATGATCATATCCAACCATCTGCA
CCATCCATCAGTCTATTGGTGGACCATTCAGTGGATACCATCGTGgaaga
taaagaaagtgaagatgaacaggaagaagttgcaaaagaaggaaaaaccg
aagacattgaagatggagaagacagaaaagagaTTACTGTTGCTGAGGAA
ACTCCAAAAGAAGAAGAATCTGGCAAAGATTCTCATGAAGATTCAAAACA
ACTTGAAGGCTCTGAAAATGTGTCAGATCTTGTTCCAGTCGGAATATCTA
GTCCATGTCCTTGTGATGAGGACGACAAAAATGTCGAGGAAGTCGAAGAT
TCTATAGATGGTGAATGCAGCTATGGCAAAATTCGTCTCTTATTCTTCCG
CGAACCAGAAGACGATATTATGAATGTGAAGGTCTTTCGTGTTGATCAAA
TGCCATCTACTACAGAAGGTGGTTCAAAAGATGTCAGTATCCATCTCTGC
CTAAAACCAGCTTCCAAGCAACGATATAAAACAAAGATGAAATCAACATC
TAAAGCAAGATTTGACGAAACGtatgaatttcgaaaaatcaaCAATAAAG
CAATTGAATCTTCAACATTGAGGATAAGAGCTTATGGTAAATGTAAGAAG
ATCATTGGTGAAGCTCATATTCCTTTATCAATGgtcaaagattttcaata
tCAAGAAGTTTGGTATTACTTCTCACCATTTGACAAAAAGAAATCCAAGA
CGAAGAAAAACAGTGAAGCTCCAGCAGTAGGAAAATGGTATTTTGCAAAG
AATGAATGACTTTAGAAATCCAAGACGAAGAAAAACAGTGAAGCTCCAGC
AGTAGGAAAATGGTATTTTGCAAAGAATGAATGACTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127_pilon | genome | sc0000127_pilon:158644..160415 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1171-1245:1698 |
| Aaloc | 1-1170:1 |
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