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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:17016..19955- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045450 ID=XLOC_045450|Name=XLOC_045450|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2940bp|location=Sequence derived from alignment at sc0000085_pilon:17016..19955- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGAAACAACTAACAATAATACAAGGTTAGTTTTTAACGTGGGCGG
CCAACGCCACGAGGCATTTTTATCAACACTAAAAGCTATACCTGGAACTC
GTTTATCATGGATTGCTGAAAATTTCATGCTATTGAAACATTCGCCTGCA
TATGACCCTATCAAAGAAGAATTTTTTTTTGATCGTAGCCCGACGGCATT
TGTTCAGATCCTAAACTATTTTCGAACCGGCGAATTGCATTATCCTACCA
ACGTCTGTGGACCCTCATTTGCGACGGAGCTCCGGTTCTGGGGCCTTGAT
GAAGAGCAAATGCAAAGCTGTTGCTGGGAAGGTTTCACTGCAAATAGAGA
TAAAGACGCAAAGCTGAAAGGTTTTAAAGGGCCACATTTCGAAATGGATT
CATTAGCAGCCTGACGAAGACAATTTCGAAGCACTAGGAAAGCGTTACGA
GATTCGCTATAAACTGTGGAAGTTCTTTGACGATGCATATTCTTCTAAAG
CAGCTAAGGTAAATATATTATAACGGGTTTATGTTTGATACCAAGCATTT
TGAGTTGCAGGGTTTCAAATCCTTAGATTTTGTTCCACGAATGAAAAATG
TCTTGCGACGGAGCCCCCCCCCACACTATTCACTTTGAAAATTGTCTTAA
AATCCATTCCTATTTTAATGGGTTAAAAGTAACGTAAAACTACGACATAT
CGGGAAAATAGGTCGAACTCTCAAACAATTCAACTTTTTACTATATTACT
TGTCACTGACACATGAGATTTAATCATTGAAAACTTTGAAACCATAAGTG
GCTAAAGAAAAGTTCAAGGAGAAAATTGATATTGTTGAGTAAACAGCAAT
GGTATTTATAAGTGGTACCTCCCAAGTGGTACCTCTCATCAAGTAATAGC
TCCAACTTATTTTGCTTTCTTCACGACCATGAAATTTGCCACAAACTTAT
TCTACGAGCAAAAAAAGCTCGAACTAGCCCACATGCAAACTACTGAGTCG
ACCTCATTTCCACAACATAACTATAAATAACTGGAATGGCTACTCTAAGG
TCCCAAATGATAAGGAGGGTTCCGAATAATTGTACCTCCATAAAACCTTT
TTTATTCATATACTAAAACCAGACTATTTAGAGCAATTCAGCTTGTGATA
GTTGAAAATATGACATTAAAGAATACTAACATATAATACTAAAGCGACCG
TAGTGCAGTGATAGAGCATCCGGAAACGGCTTGCAAGCTTGCAAGATTCC
CAAAATGGTACTTGATGCCTCTCTGCTTGATGCTCAACAATTAAGAGGGG
CCCTAAGAGCAGGATCAAGGGTAAGTGGAGCAATCCAGGGAGAAAGAGTG
GCACCCTCCCCTACCTGCGTATATAGCTATCGAAAGAGGAGCCTTCGGGT
TGCCTCCGACAACTTACTTACTTAACATACAATATACTTTAAATTTTTAG
ATTTATTCTTCAATCCATCACGTATTGTTGCTGATTTACATCATACTCCC
CATCATAAACTCCATGTCTTTCATCAAAGACCCTCCAAACGAAAAAGCAA
GAAACGCTGGTCTATTCATCAATTACAGTGAAATCGTTTTAAACATCTTC
TTTACAATGGAGCTTGTCATACGATTCATGATATTCCCAAACAAAAAGAA
ATTCATCCGATCACGATTAAACATTGCTGATTTCATGTCTATCATTCCGA
TTTATATTGATATATTATTTTGCCAATACCCATCGTATAAAAGCTATAAA
AACTATATCAATATTCTCGTCGTGTTCCGCATCTTGAAGATTTTCCGCTC
GTTTCGTTACAATTACACATTACAAGTACTTTTTAACACACTGAAGTCAT
CGTTACCTGAACTTCTTCTGCTGGTTTTCTTGATGATTTTGTTAGCAACC
GTTTTTGCGTTCGGTTGTTATTTTACCGAACAGGAAGATCCGAATACTGA
GTTCCATTCTGTTCTGCATAGTCTATGGTGGGCTTTCATTACTATGACAA
CGGTAAAAAAAATTACTTTTTCAAACTTTAACTGGGGAATATAGGCAATA
TACTTATTGGGGGGCACTTAGGCAAAATCGGGTAAGGGAACGTGCCACTC
GCCAGGGTCCCCTTTTTAGGGGATATCAGATATCTGACATGGTCTAAAAT
TTACTAATTTTCAAGATGTGTTCTGACAGGATCGACTTTTGGTAATTTTG
GACCATTCTCAGGGTGGAAATTAGAAAAAAGTTCAATTTTTCGTCTACTT
TTATTCATTTCGGCCACCTGAAAATAGGAAAACTTTTCGATTTTTCTTTC
TGACAGGGTCCAACTCCAGCGGCACGTCCCCATCAGCCGCCAAGCCCCCC
CCGGTGTATATTCCCTATATAATTTTCTGGAATCTAAGACCAAGATTTTT
CTTTATTTACGTTCTCAACGTTTACGTCAGCCTCATGATCATCTTTTCTA
CCGCTAGGTTGGATATGGCGACATGTATCCAAACAGTTGGTTCGGACGAG
TTATCGGTATTATGGCTGCTATATGTGGTTTACTCATGGTGGCTCTACCA
GTATCAGTTGTCGCTACAAATTTCTCAATCTATTACAGCTATGCTAAAGC
TAGAATATCACTACCTCCAAAAAAGGAAGTCCGATATGCAAAAGACGCTA
ACAATTTCTTAGGACAACCTACGAGTAATGACGAGAAAGAAAGACTTAAA
CGGAATAAAATTCAACCGGGTACACCCTGTGTTACACCAATTAAATTGAG
TCCGGTGACTAACAGAAAACCCCGGTCACAGACATTACCACCAATGAATG
ATGAACGCTTTTCAAAAATTCACCGGGCCGTTCAAAAGATGAGACAAGAC
GGTTTGTTAAGTAGTAAAAGAAAGAAAATGGATTTACCAACTCTTGTTAT
GGTGCTGTCCAGTAAAGGAGATTGGACCCAACCAAAGTAG Coding sequence (CDS) from alignment at sc0000085_pilon:17016..19955- >XLOC_045450 ID=XLOC_045450|Name=XLOC_045450|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3086bp|location=Sequence derived from alignment at sc0000085_pilon:17016..19955- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGAAACAACTAACAATAATACAAGGTTAGTTTTTAACGTGGGCGG
CCAACGCCACGAGGCATTTTTATCAACACTAAAAGCTATACCTGGAACTC
GTTTATCATGGATTGCTGAAAATTTCATGCTATTGAAACATTCGCCTGCA
TATGACCCTATCAAAGAAGAATTTTTTTTTGATCGTAGCCCGACGGCATT
TGTTCAGATCCTAAACTATTTTCGAACCGGCGAATTGCATTATCCTACCA
ACGTCTGTGGACCCTCATTTGCGACGGAGCTCCGGTTCTGGGGCCTTGAT
GAAGAGCAAATGCAAAGCTGTTGCTGGGAAGGTTTCACTGCAAATAGAGA
TAAAGACGCAAAGCTGAAAGGTTTTAAAGGGCCACATTTCGAAATGGATT
CATTAGCAGCCTGACGAAGACAATTTCGAAGCACTAGGAAAGCGTTACGA
GATTCGCTATAAACTGTGGAAGTTCTTTGACGATGCATATTCTTCTAAAG
CAGCTAAGATGTCAGAAACAACTAACAATAATACAAGGTTAGTTTTTAAC
GTGGGCGGCCAACGCCACGAGGCATTTTTATCAACACTAAAAGCTATACC
TGGAACTCGTTTATCATGGATTGCTGAAAATTTCATGCTATTGAAACATT
CGCCTGCATATGACCCTATCAAAGAAGAATTTTTTTTTGATCGTAGCCCG
ACGGCATTTGTTCAGATCCTAAACTATTTTCGAACCGGCGAATTGCATTA
TCCTACCAACGTCTGTGGACCCTCATTTGCGACGGAGCTCCGGTTCTGGG
GCCTTGATGAAGAGCAAATGCAAAGCTGTTGCTGGGAAGGTTTCACTGCA
AATAGAGATAAAGACGCAAAGCTGAAAGGTTTTAAAGGGCCACATTTCGA
AATGGATTCATTAGCAGCCTGACGAAGACAATTTCGAAGCACTAGGAAAG
CGTTACGAGATTCGCTATAAACTGTGGAAGTTCTTTGACGATGCATATTC
TTCTAAAGCAGCTAAGATTTATTCTTCAATCCATCACGTATTGTTGCTGA
TTTACATCATACTCCCCATCATAAACTCCATGTCTTTCATCAAAGACCCT
CCAAACGAAAAAGCAAGAAACGCTGGTCTATTCATCAATTACAGTGAAAT
CGTTTTAAACATCTTCTTTACAATGGAGCTTGTCATACGATTCATGATAT
TCCCAAACAAAAAGAAATTCATCCGATCACGATTAAACATTGCTGATTTC
ATGTCTATCATTCCGATTTATATTGATATATTATTTTGCCAATACCCATC
GTATAAAAGCTATAAAAACTATATCAATATTCTCGTCGTGTTCCGCATCT
TGAAGATTTTCCGCTCGTTTCGTTACAATTACACATTACAAGTACTTTTT
AACACACTGAAGTCATCGTTACCTGAACTTCTTCTGCTGGTTTTCTTGAT
GATTTTGTTAGCAACCGTTTTTGCGTTCGGTTGTTATTTTACCGAACAGG
AAGATCCGAATACTGAGTTCCATTCTGTTCTGCATAGTCTATGGTGGGCT
TTCATTACTATGACAACGATTTATTCTTCAATCCATCACGTATTGTTGCT
GATTTACATCATACTCCCCATCATAAACTCCATGTCTTTCATCAAAGACC
CTCCAAACGAAAAAGCAAGAAACGCTGGTCTATTCATCAATTACAGTGAA
ATCGTTTTAAACATCTTCTTTACAATGGAGCTTGTCATACGATTCATGAT
ATTCCCAAACAAAAAGAAATTCATCCGATCACGATTAAACATTGCTGATT
TCATGTCTATCATTCCGATTTATATTGATATATTATTTTGCCAATACCCA
TCGTATAAAAGCTATAAAAACTATATCAATATTCTCGTCGTGTTCCGCAT
CTTGAAGATTTTCCGCTCGTTTCGTTACAATTACACATTACAAGTACTTT
TTAACACACTGAAGTCATCGTTACCTGAACTTCTTCTGCTGGTTTTCTTG
ATGATTTTGTTAGCAACCGTTTTTGCGTTCGGTTGTTATTTTACCGAACA
GGAAGATCCGAATACTGAGTTCCATTCTGTTCTGCATAGTCTATGGTGGG
CTTTCATTACTATGACAACGGTTGGATATGGCGACATGTATCCAAACAGT
TGGTTCGGACGAGTTATCGGTATTATGGCTGCTATATGTGGTTTACTCAT
GGTGGCTCTACCAGTATCAGTTGTCGCTACAAATTTCTCAATCTATTACA
GCTATGCTAAAGCTAGAATATCACTACCTCCAAAAAAGGAAGTCCGATAT
GCAAAAGACGCTAACAATTTCTTAGGACAACCTACGAGTAATGACGAGAA
AGAAAGACTTAAACGGAATAAAATTCAACCGGGTACACCCTGTGTTACAC
CAATTAAATTGAGTCCGGTGACTAACAGAAAACCCCGGTCACAGACATTA
CCACCAATGAATGATGAACGCTTTTCAAAAATTCACCGGGCCGTTCAAAA
GATGAGACAAGACGGTTTGTTAAGTAGTAAAAGAAAGAAAATGGATTTAC
CAACTCTTGTTATGGTGCTGTCCAGTAAAGGAGATTGGACCCAACCAAAG
TAGGTTGGATATGGCGACATGTATCCAAACAGTTGGTTCGGACGAGTTAT
CGGTATTATGGCTGCTATATGTGGTTTACTCATGGTGGCTCTACCAGTAT
CAGTTGTCGCTACAAATTTCTCAATCTATTACAGCTATGCTAAAGCTAGA
ATATCACTACCTCCAAAAAAGGAAGTCCGATATGCAAAAGACGCTAACAA
TTTCTTAGGACAACCTACGAGTAATGACGAGAAAGAAAGACTTAAACGGA
ATAAAATTCAACCGGGTACACCCTGTGTTACACCAATTAAATTGAGTCCG
GTGACTAACAGAAAACCCCGGTCACAGACATTACCACCAATGAATGATGA
ACGCTTTTCAAAAATTCACCGGGCCGTTCAAAAGATGAGACAAGACGGTT
TGTTAAGTAGTAAAAGAAAGAAAATGGATTTACCAACTCTTGTTATGGTG
CTGTCCAGTAAAGGAGATTGGACCCAACCAAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:17016..19955 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1060-1542:484 |
| Aaloc | 508-1059:1491 |
| Aaloc | 412-507:2529 |
| Aaloc | 1-411:2941 |
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