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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:1162181..1164268+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045258 ID=XLOC_045258|Name=XLOC_045258|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2088bp|location=Sequence derived from alignment at sc0000031_pilon:1162181..1164268+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCGAAAACTTTGACCTCAATAGAAGTCGACTAACAACATCTTCAAA
TGTTGGGTCACCAGGGAAATTCATTTTCTTATTAACAAACTGTAACTTAG
AAAAAGGTAATTCTGCTTTATATATTGGTTAAGAAATTTAATCAGGAGAC
TTATATAGACTCAACGAACAGCGAATTTCGCCGATCCAAGTAACGATAAG
AATTCACATGTCTAAAAATCGGTTTGGCTTCTCTCAAGTACATTATTCAC
GCTAATCAACgccggcctagaatctagaattCGCCGGCGTTTATTTTCCA
TTCGCTAGCCTAtcagaaacaaaacaaaacacatGGGCTAAGTATAAACT
GCAAATATTTTGGACAAGACTTTATTTAAgacaaatgttttaaattttgc
tgcTGCGTGTAGTACGCCGAAAATATGAACACCTTTTTTCATCCTAACAA
ATCAAGTGAAATAAGATCTTTTTCAGTTTTACGATCTGTTACGATTACTT
ATCTTTCAATTTATCTTTTAAAGCATCTATTCCATTTGGTCCACAATTTG
GAGATCAATTTGTACAAGCTGGTGACGATGTTGCAACTTGCTTTTCGTCA
TTTTCGAAAgaatttccattgttttcaacaGCTAACAGATCCAAACTTTG
TGTAAGTATAATATTCGTTAACAAATTTTCCGCCAATGTCAGTTTCCCAT
ACTGTAGGCTCTTCAAAACTATTTTCCTTGTTTGTTAAGAGTAAGTCATA
TAACTATTGTCAGAAGATAGAAACTCACTTTTTAGTCATATATCTAATTA
ATTTAGCTGACCCTTATTCAATCTAAAAataccttaaccctattcgtact
aagggtgaaactaatgttaatagctcctgaaataatagagcttttggcat
gaaattttttgtaaattcctaaaactttaatttagcttcgaaataaaaaa
atttgaccatCTAGAAATTTTCACACCTTAAACATGATggcatttctgac
agtaaggtgtcacgaaaattgacacatttccaatacaaatttatttttat
gtcaaatatatcgtttaaaccgtaattttttgaatatttaggataaaata
ggCATTTAGATtcagggaacttttttcttaaacCCTTGTTTGTTTGtaca
ataactttttataagaacaaaggaaattttcggtttttgctcactttggg
cacgATGAATTTCGTCATCAAAAAGATTTAGGATACCTTATAATGACAAG
GATCTGGTGTGtcaaattttatccaaaaaataccaactagatcaaaagtt
aagtgGTACAGGAAAAcccccccTTAGTTTTGAACCACCCCTAAAAGCCA
attatgaatagggttaaacatAAAACAACGATCTTTCAAAATCATACCTT
GAAGGagctaattttggtgaattttgacAAAACTTTTAGTCCAAGATTGA
GATTAGTTCGAATGCCTCTCATCACCCATAGAGAAAAACTACGTAGAAGT
TTATATAAAAGGAAAATGAGTTGTTACTAGAACGTTTGTTTTGAATACTT
ATTCTTTGTTTGATACTAGATAAGTAGTAACGGATACATCACTGTCGACC
AACCAAAAACCAGCGCAAAAGCTTCCTTAACTTCATCTTATCCAGTGCTT
GTTCCATTTAATTACGATATGAGAAGTCTTGGTAACAACATTCTGTACCG
TACCACTAAAgatcaaaatatattgaatCTTGTTGACAGAGATATCTCAC
TTTTAAAATCTGTGTCGTCCTTCAAATCAAAAGAAGCAATCGTTGTAACA
TACAATAACGTTCCTTACTACGAAATCCGAAACATCTTATTCCGTTATCA
AGTCGTCATAGCTACGGATTACAAAAACACATACACTATTTTCAATTATG
ATCGAATTGATAGATCTGGTTATCACAACATTGGTTTTTCTGAACCATCT
GCGTGTAATAAATCGATAAATGTTCGTTTCAATCTTACTAAAAGTAATCT
GACAACTAATTCGAATGTTGATGTTCCTGGGAAGTTTGTCTTCTTGTTAA
CAAAGTGCAATAAAGGTAAGAGAATAACGGAAAGTTGA Coding sequence (CDS) from alignment at sc0000031_pilon:1162181..1164268+ >XLOC_045258 ID=XLOC_045258|Name=XLOC_045258|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1506bp|location=Sequence derived from alignment at sc0000031_pilon:1162181..1164268+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCGAAAACTTTGACCTCAATAGAAGTCGACTAACAACATCTTCAAA
TGTTGGGTCACCAGGGAAATTCATTTTCTTATTAACAAACTGTAACTTAG
AAAAAGATGACCGAAAACTTTGACCTCAATAGAAGTCGACTAACAACATC
TTCAAATGTTGGGTCACCAGGGAAATTCATTTTCTTATTAACAAACTGTA
ACTTAGAAAAAGCATCTATTCCATTTGGTCCACAATTTGGAGATCAATTT
GTACAAGCTGGTGACGATGTTGCAACTTGCTTTTCGTCATTTTCGAAAga
atttccattgttttcaacaGCTAACAGATCCAAACTTTGTCATCTATTCC
ATTTGGTCCACAATTTGGAGATCAATTTGTACAAGCTGGTGACGATGTTG
CAACTTGCTTTTCGTCATTTTCGAAAgaatttccattgttttcaacaGCT
AACAGATCCAAACTTTGTATAAGTAGTAACGGATACATCACTGTCGACCA
ACCAAAAACCAGCGCAAAAGCTTCCTTAACTTCATCTTATCCAGTGCTTG
TTCCATTTAATTACGATATGAGAAGTCTTGGTAACAACATTCTGTACCGT
ACCACTAAAgatcaaaatatattgaatCTTGTTGACAGAGATATCTCACT
TTTAAAATCTGTGTCGTCCTTCAAATCAAAAGAAGCAATCGTTGTAACAT
ACAATAACGTTCCTTACTACGAAATCCGAAACATCTTATTCCGTTATCAA
GTCGTCATAGCTACGGATTACAAAAACACATACACTATTTTCAATTATGA
TCGAATTGATAGATCTGGTTATCACAACATTGGTTTTTCTGAACCATCTG
CGTGTAATAAATCGATAAATGTTCGTTTCAATCTTACTAAAAGTAATCTG
ACAACTAATTCGAATGTTGATGTTCCTGGGAAGTTTGTCTTCTTGTTAAC
AAAGTGCAATAAAGGTAAGAGAATAACGGAAAGTTGAATAAGTAGTAACG
GATACATCACTGTCGACCAACCAAAAACCAGCGCAAAAGCTTCCTTAACT
TCATCTTATCCAGTGCTTGTTCCATTTAATTACGATATGAGAAGTCTTGG
TAACAACATTCTGTACCGTACCACTAAAgatcaaaatatattgaatCTTG
TTGACAGAGATATCTCACTTTTAAAATCTGTGTCGTCCTTCAAATCAAAA
GAAGCAATCGTTGTAACATACAATAACGTTCCTTACTACGAAATCCGAAA
CATCTTATTCCGTTATCAAGTCGTCATAGCTACGGATTACAAAAACACAT
ACACTATTTTCAATTATGATCGAATTGATAGATCTGGTTATCACAACATT
GGTTTTTCTGAACCATCTGCGTGTAATAAATCGATAAATGTTCGTTTCAA
TCTTACTAAAAGTAATCTGACAACTAATTCGAATGTTGATGTTCCTGGGA
AGTTTGTCTTCTTGTTAACAAAGTGCAATAAAGGTAAGAGAATAACGGAA
AGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:1162181..1164268 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 235-753:1570 |
| Aaloc | 109-234:526 |
| Aaloc | 1-105:1 |
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