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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:988365..994359+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045252 ID=XLOC_045252|Name=XLOC_045252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5995bp|location=Sequence derived from alignment at sc0000031_pilon:988365..994359+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACATGTATATTTACCAGCCATCTTTGTAGAAATGAATAGGCTGGAATG
GTACCATTACGTCAATTACACCCTTTTCACACTTCTGATGTCGACGAAAT
ACATTCTGGTTGTAGCTGATGGAGACCACCCAACTGTTACCAGTAGCAAC
AACGGCCTTAACACAAGTCAAATACTACTCAATACATCGATGGCTGTAAA
TTCAACAAACGAGACCAATAGTTACTCGAGCAATAATACTTTTCATGAGT
AAGTTTGAATAGGTTTTTATCGTTATGATTCTGAGTATATAATGTTACTG
TTTTGCTCCGGGGCTTGGCAAGTAAATAAACATTGGCTTAAAAAGCAACA
CAATTAACATGAaggcaaaaataattttgattttaggtaAAATTCAacgt
tttaaaggttttagatTTTACGTAATTTTGGCTGATACATCAAGACTTTA
AAATCCAATGTGCTGCATGTAATTTCATCCCCTTGAAAAtattcagaaaa
ttttaatcatgatttttttcttcaaccTTTCAATAGAGGCCAcaaaaaga
tgaagaagaaatttcCACCTGAGGGCTACGAAGGTCGTGAATCTGGAGTC
CATGGTATGCGAAATATACTTTTACATAAAAGAAAATATCCTCGTTTCGG
GCTAAAACGAAAGCCTCATTGAAGAGTTATTcgtaacttttgaaaaatac
tttttaggATATACACAAGGTCACTAAAAAGGGAAGTATTTGGGAAGCGG
TATAAGCGGGTGGAACAGGAGGTGGAGGAAACGGTGACGGTGGTGTTCGG
TTGTTTAAAACTTGACCACCGCTATTTTTCCGTCTGCTACCCGCCCATTA
CGGCTGTTTACTCCACACATAATAATTCCCCGCCTTTACTAGAAAGAGTG
TTTCTCTTCTTTTTAGATGGACCTCAAAGGATAAATTTGACAGTGTGGGT
GGAATCGATCGTCAATATTGATGTGTCTGCTAtggtaagaaaaagaaaag
aatttttcatttttcatttcatttttcactcgtatttttcCTCGAATCAA
CTATAATGAAATTGATAATATTCTTGTTGCATAAATAGAACTGTCGAGAT
TCCCGCATACACGCTTTCTGAAAaatgaggctcggctgttcttatttctt
gTAATTTCCAGGCTTAAATACTCATCATCAATTACCACTTTTATAAAACA
TTAATTGATTCATCAATTGGATAAAGCTGTCACTGTGTCTCACTTACATT
TTGCCAATTGGCAGTGTGTAGGacagatttgcactgcaacggaCTGTGCT
CGATTCCCAAACACTTCAAGACAGAGTGTTATGGAAGCATGGCCTTCACC
GTCTtaaggccagtctccacttgcgcgcgctgtgactgcactttttcgag
caaagctaccatgctattggtcaaaagaaaaatgaagcaactccattggc
gcgatctgacgtaagggttgaaaaacgttgaaatgtgttcaacttttttt
tcgagcgcgcgttTTTACGAcgttatcttttttccaagcaaaaaggatgg
AAGCCAAAAATTGCGATTGCAGCGCGcccaagtggagaccggcctttagt
aaGATTATTAAGCCTGATAAgctattaaaattttttcaacaaagtGTATC
ATATTTGAGAATTTGGCTTTGTCATTTTGAGATTTGCAAGGTGATCTTTC
ACTCATCTTGTTCCTATCAGGAATATGTGGTTCACGGTTATGTCATTCAA
GAATGGGTGGATGCCCGTTTGAATGGATCGTTGGACCACCCTATCCTTCT
TTCTGGAGAGGAGGGTCGTGCAATTTGGTTACCAGACCTCTTCTGTTTGA
GTTGTAGAAGCTCGACACTGAATTCACCAACCAATGGGAATGTATTGATC
AAAGTTTACCCTAACGGTAGCATCTATTATAGTCAATTGTAAGTTTTTTC
TACACCATTGTCAGTACAAACGAAAATGTACGTAGCCGAAAAGCTTTTac
tatgaaataaattttgattttttaataaaaaatggcgaatagattgaaca
taagATTTTTCCATATcgtctttcaaaaaatatttgatcacTTTCTTTTA
CAATGATTTTTTAACCAGAATTCATTCTCTGCGAATCATCAAGGTTACTT
CAAATGACAAAGGTCTGTTTAAACGAGAAATATTTCAACCTAGGTAAATA
ATCATCCAATTCTAGTGTATTTTACCCGTTTACTCAGCAAGAATAATATT
CGGCCCGCTATCACacctaatcgcacgatgggttattttttcttatttgg
cacgccctcaaagagagcaattaatcgttaattgcatcctgtagagagca
attaatcgttaatcacactccaatgcggcgccaatgtttacaaaattgat
tttaatgttttttctcacattttttttgcatcgaacgttttaattgcatt
caaatttattttgtgagaaagaaaatcaataaacaacaataaaagaaaga
cataaagagaagagaaaaatataaaactctcagtgtaatttctgtaattt
actttccgaactgggaaaaagtagtgaaagccattgtgcgattagctcgt
aatcatataataactcgtacaattcgaaaattgcactcgtgatttttttg
tttcgaattttcctcgtcctttcggactcggaaaattaataacaaaaaat
cactcttgcaattatattcgaattgcacttgatatcatgtgattacatat
gcTAATATTCTTTTCAGTACACACTCCTGTGTCAAAAATAGCAAATGTAC
TAATTGAGTATCCTTGAATTTTACCTCATCCCCTCATTTGTTCCAGGGCC
AAACTACATGGATCGTGTTTCATGAAGCTTCACTACTTTCCGTTTGATAA
TCAAATCTGTCCTCTCAATTTGTCAAGCTGTAAGTCATTGTTTTCATTCC
TATATCTACGTCTTTGAACTAGTAAatcgtaatgggtaatcagttccatt
gcgcgctaatgacgacttaatattgatccaaagttttgaaaggttttgaa
gatttttacgTTTAGCCAACGGGAAACTGTTATCGGGGCGTTCTGATTAC
CCATGGTCcatttcaactctgaaatggcCTATAGAAGAAGGAAATAAAAC
GAGCCATAGGTTTGAACTTTTCGACTATTTTATAACGCTTTACGCGGTAG
GGCTAGTGATAGCTAGTGGTATTTATAATATTAGTAGCATAGCGATCCGA
AGCAACTGatcaattttttaaacctcTTGAAATAATTAATGAATTAATGT
CAATCTAACATAAAATCACAACCTTAGTCATTTTTGTTCAATGGTGAAAT
TTCCATTAAAAAGTGACCTAAAAGGCATAGCGATTAAATGGCATTatgct
tttccagaaaaaaaattgaatataggaggataaaatattttttggtaatt
CACCCTCCGGATATTGTGACTTTCGATCCCCCTGACAGCAGGTCTAACTC
CCCGGACACGCATCAGTCGACCCCGGGCATTTACGGgcattttctggaat
ggcccattcttGACAAATGGAAatgtattgaaattttcagtggtaaacag
gtttttcctttcttctccACACCATTAAAGATGGATATAGCAATGAATAC
TTGGTATATGAATGGAAGAGTACGCCAGTTGTGGAGAAAATGCAGTTAGA
ACAATTCATCGTCAACGAAAATGTTCTTCCACATAATGAAATCAAATCGT
ATCCTGCAggtaatttttaaataattgtgAAACAGTTGAGATTTGAgcta
tagaaagattcaaattacatgttttttcttttataagcataacgtttata
agcatatgcaggctcaggtttgggtacctaaacaatggctttaatgtttg
agaacaatagaatgctaagcataatgcgagcctgatgtaggagcagacac
ttgcttataaaaaaaaaacatgtatggaAATAATTTTAGGAGTAATTCTT
CTAGACGAGGAGGTCTGAGACTGAGAATTAGTTTGAAttctagaaagatt
tgaataatagagaGGTTTTCGGGATGACAGGTGTGTACCGCCAGAGTTTT
CTTTGAACTTGGACTCTAAAGAGATAAATCTTttaagattctaaaaaaat
gcCTCGACAGAATAGAGAAAAAGATATCGAATTGAAAACCGTCCTGATGG
TTCAATGTTAATTGCTTTCAGGCGATTTCAACATTTTATCCTTTGAGCTG
TTCTTCACTCGCCAAATTGGATTTTACGTTTTGCAAGTATTCATCCCATC
CATTGTTTTGGTGTCGTTAAGTTGGATGACATTTTACATGGAACCAGCTG
ATGTTGGAGATCGTTTATCCATTGGCGTCACACTCATCCTGACCATGATT
TTCCTATTGGGTTATATCAATCAATCCCTCCCAAAGGTaaacatgttgtt
tttttcggATATCATTTGCATACTTGGTGGCGGTTTTCAGAGCGATGGTG
GTTTTATTCCAGAGTCATCTCAACTTCAATAAGGATGATCGGTCTTGGAT
TAGGAGTCACAACTTAGTCTACAAATTTTTCCATATAGCGAATAAATAGA
GAATCGTCATGGTTGACTTATGTTGATCTATAGACCTTAATGATGTAAAG
AAACACTATTTCGGTTGTTCGCAAGATAAATCACtccttcttttggcaaa
attcaATTCCGTGAAACTGTAGGAACTTCAAGCCGATCTACAACACTGCT
ATTTATAAACCATTGGTATGGTAATGTGTTTTTCACCTACTATAACACTC
CTTTGAATGGCCTACATATCTTTTACTCACTCCTATTAATCAACTATTTC
TGTTTCATCCAGGTTTCGTACATCAAAGCGGTTGATTGGTATGTTATCGC
TTCACTATTCATGATCGTTGCAAGTGTAATCGAAAGTGTCCTTGTTTACT
GGCTCCTTCAtcgtaaacaaaagaaacagaAAGAACAGGTGCATACgaat
ttcatatttcaaaaaatggaggATCTTCCCCCGAACTCATTCTTTTATAT
TAGAACTTAATTTGAGCTGAGCCTATAATGCTTTTGGAAATCCTGAAATT
CATTCACTTGAATATGAAGAAAGCAATGTTAAAGAAAgaacttttaatga
aaaccaaaacctttccaaaagaaaatatttaacaactgaacccaaaacta
gcgaaaccaatcccaagaaaaatatacaaaaaaatcaatGGTAAAGATCA
TTGATCgaaatagttcaaaacaaatgctcGAATACTACCACTATTCAATG
GAATTAAAAAtaggttttgtgcttgttggaGAGCTattcaggagtggaat
attattaaATAGataactttaaaaataaaatggagaGTGAAGAAGACAGA
ATTGTTTACTATAAAGTTATAAATCTAATGTAAAATCCGTTTTTGTTTTC
AGAATTCATTCGAGAGATTCGATCGCTATTTGGACAAGAAGTTTAACATG
AACAACTCTTTTTTACCATTACCTTTACTACAAGGTGGTGCCCAGGCCGC
TGGGATAAGCATGCCCAATCTCCCGTCGCTTGGCAACAATCAAAAACCGT
TTTACCCTCGAATGACGTCCTTACAAGAACTCAATGAGAAACCCAAGCCG
AATGGGATTAATCCGaaaaaaCCAATCTTCGCTAAATTGGAAGAAGATGA
AGATATCGACGAATCCGATAAAAACGGGGAAACCAATTTCTGCAGCGAAA
AGGATCCATTGACGAAACCGGTAATTAGAAATCGGGTTAACAGTAAGTTT
AATTATCATCGGGATAGCCTTATGGAACAGCGCGAAAAGAAAAAATCGGA
TGAAAGTGAGGAAAGTGAGTCTAAACAGTATAATCCGAATTTGgataaaa
tttcgaaattggATATTTTCGCTCGGACAGTATTCCCTTTGTTTTACGTG
ATTTTTACGTTAGCttactttatttatttctttggCACAAAATAA Coding sequence (CDS) from alignment at sc0000031_pilon:988365..994359+ >XLOC_045252 ID=XLOC_045252|Name=XLOC_045252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3396bp|location=Sequence derived from alignment at sc0000031_pilon:988365..994359+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACATGTATATTTACCAGCCATCTTTGTAGAAATGAATAGGCTGGAATG
GTACCATTACGTCAATTACACCCTTTTCACACTTCTGATGTCGACGAAAT
ACATTCTGGTTGTAGCTGATGGAGACCACCCAACTGTTACCAGTAGCAAC
AACGGCCTTAACACAAGTCAAATACTACTCAATACATCGATGGCTGTAAA
TTCAACAAACGAGACCAATAGTTACTCGAGCAATAATACTTTTCATGATC
ACATGTATATTTACCAGCCATCTTTGTAGAAATGAATAGGCTGGAATGGT
ACCATTACGTCAATTACACCCTTTTCACACTTCTGATGTCGACGAAATAC
ATTCTGGTTGTAGCTGATGGAGACCACCCAACTGTTACCAGTAGCAACAA
CGGCCTTAACACAAGTCAAATACTACTCAATACATCGATGGCTGTAAATT
CAACAAACGAGACCAATAGTTACTCGAGCAATAATACTTTTCATGAAGGC
CAcaaaaagatgaagaagaaatttcCACCTGAGGGCTACGAAGGTCGTGA
ATCTGGAGTCCATGAGGCCAcaaaaagatgaagaagaaatttcCACCTGA
GGGCTACGAAGGTCGTGAATCTGGAGTCCATGATGGACCTCAAAGGATAA
ATTTGACAGTGTGGGTGGAATCGATCGTCAATATTGATGTGTCTGCTAtg
ATGGACCTCAAAGGATAAATTTGACAGTGTGGGTGGAATCGATCGTCAAT
ATTGATGTGTCTGCTAtgGAATATGTGGTTCACGGTTATGTCATTCAAGA
ATGGGTGGATGCCCGTTTGAATGGATCGTTGGACCACCCTATCCTTCTTT
CTGGAGAGGAGGGTCGTGCAATTTGGTTACCAGACCTCTTCTGTTTGAGT
TGTAGAAGCTCGACACTGAATTCACCAACCAATGGGAATGTATTGATCAA
AGTTTACCCTAACGGTAGCATCTATTATAGTCAATTGAATATGTGGTTCA
CGGTTATGTCATTCAAGAATGGGTGGATGCCCGTTTGAATGGATCGTTGG
ACCACCCTATCCTTCTTTCTGGAGAGGAGGGTCGTGCAATTTGGTTACCA
GACCTCTTCTGTTTGAGTTGTAGAAGCTCGACACTGAATTCACCAACCAA
TGGGAATGTATTGATCAAAGTTTACCCTAACGGTAGCATCTATTATAGTC
AATTGGCCAAACTACATGGATCGTGTTTCATGAAGCTTCACTACTTTCCG
TTTGATAATCAAATCTGTCCTCTCAATTTGTCAAGCTGGCCAAACTACAT
GGATCGTGTTTCATGAAGCTTCACTACTTTCCGTTTGATAATCAAATCTG
TCCTCTCAATTTGTCAAGCTATGGATATAGCAATGAATACTTGGTATATG
AATGGAAGAGTACGCCAGTTGTGGAGAAAATGCAGTTAGAACAATTCATC
GTCAACGAAAATGTTCTTCCACATAATGAAATCAAATCGTATCCTGCAgA
TGGATATAGCAATGAATACTTGGTATATGAATGGAAGAGTACGCCAGTTG
TGGAGAAAATGCAGTTAGAACAATTCATCGTCAACGAAAATGTTCTTCCA
CATAATGAAATCAAATCGTATCCTGCAgGCGATTTCAACATTTTATCCTT
TGAGCTGTTCTTCACTCGCCAAATTGGATTTTACGTTTTGCAAGTATTCA
TCCCATCCATTGTTTTGGTGTCGTTAAGTTGGATGACATTTTACATGGAA
CCAGCTGATGTTGGAGATCGTTTATCCATTGGCGTCACACTCATCCTGAC
CATGATTTTCCTATTGGGTTATATCAATCAATCCCTCCCAAAGGCGATTT
CAACATTTTATCCTTTGAGCTGTTCTTCACTCGCCAAATTGGATTTTACG
TTTTGCAAGTATTCATCCCATCCATTGTTTTGGTGTCGTTAAGTTGGATG
ACATTTTACATGGAACCAGCTGATGTTGGAGATCGTTTATCCATTGGCGT
CACACTCATCCTGACCATGATTTTCCTATTGGGTTATATCAATCAATCCC
TCCCAAAGGTTTCGTACATCAAAGCGGTTGATTGGTATGTTATCGCTTCA
CTATTCATGATCGTTGCAAGTGTAATCGAAAGTGTCCTTGTTTACTGGCT
CCTTCAtcgtaaacaaaagaaacagaAAGAACAGGTTTCGTACATCAAAG
CGGTTGATTGGTATGTTATCGCTTCACTATTCATGATCGTTGCAAGTGTA
ATCGAAAGTGTCCTTGTTTACTGGCTCCTTCAtcgtaaacaaaagaaaca
gaAAGAACAGAATTCATTCGAGAGATTCGATCGCTATTTGGACAAGAAGT
TTAACATGAACAACTCTTTTTTACCATTACCTTTACTACAAGGTGGTGCC
CAGGCCGCTGGGATAAGCATGCCCAATCTCCCGTCGCTTGGCAACAATCA
AAAACCGTTTTACCCTCGAATGACGTCCTTACAAGAACTCAATGAGAAAC
CCAAGCCGAATGGGATTAATCCGaaaaaaCCAATCTTCGCTAAATTGGAA
GAAGATGAAGATATCGACGAATCCGATAAAAACGGGGAAACCAATTTCTG
CAGCGAAAAGGATCCATTGACGAAACCGGTAATTAGAAATCGGGTTAACA
GTAAGTTTAATTATCATCGGGATAGCCTTATGGAACAGCGCGAAAAGAAA
AAATCGGATGAAAGTGAGGAAAGTGAGTCTAAACAGTATAATCCGAATTT
GgataaaatttcgaaattggATATTTTCGCTCGGACAGTATTCCCTTTGT
TTTACGTGATTTTTACGTTAGCttactttatttatttctttggCACAAAA
TAAAATTCATTCGAGAGATTCGATCGCTATTTGGACAAGAAGTTTAACAT
GAACAACTCTTTTTTACCATTACCTTTACTACAAGGTGGTGCCCAGGCCG
CTGGGATAAGCATGCCCAATCTCCCGTCGCTTGGCAACAATCAAAAACCG
TTTTACCCTCGAATGACGTCCTTACAAGAACTCAATGAGAAACCCAAGCC
GAATGGGATTAATCCGaaaaaaCCAATCTTCGCTAAATTGGAAGAAGATG
AAGATATCGACGAATCCGATAAAAACGGGGAAACCAATTTCTGCAGCGAA
AAGGATCCATTGACGAAACCGGTAATTAGAAATCGGGTTAACAGTAAGTT
TAATTATCATCGGGATAGCCTTATGGAACAGCGCGAAAAGAAAAAATCGG
ATGAAAGTGAGGAAAGTGAGTCTAAACAGTATAATCCGAATTTGgataaa
atttcgaaattggATATTTTCGCTCGGACAGTATTCCCTTTGTTTTACGT
GATTTTTACGTTAGCttactttatttatttctttggCACAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:988365..994359 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1156-1698:5453 |
| Aaloc | 1030-1155:4863 |
| Aaloc | 817-1029:4224 |
| Aaloc | 688-813:3633 |
| Aaloc | 604-684:2848 |
| Aaloc | 385-600:1721 |
| Aaloc | 319-384:919 |
| Aaloc | 250-315:538 |
| Aaloc | 1-246:1 |
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