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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:633189..641454+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045236 ID=XLOC_045236|Name=XLOC_045236|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8266bp|location=Sequence derived from alignment at sc0000031_pilon:633189..641454+ (Clytia hemisphaerica_ch_hm2_pilon) ATGGGTGAACAGAACATCACAGACATTTCATGGCGATTTGTACAAATGAT
CGTTGACAGCCGCAAGACAGATGTCCGATATTTCGATGGGTAGGTAACAC
AGAATAATACAGTtaacactctctaattcgacgttaaTAAATGTGATGTT
GGTATTAAGGCGTTACTCTCTTTTTAGAGAGTCTTTGCTCATTGTGGATT
AATTTTgatctaattcgacgttctaccaTTCGAttcgctccattattcga
taacaTTGAAAGCCAACATCGACAATAaactcgaattagagagagcatCA
AGTGTACAGTCAGTCATCAGATCAAAGGACAACatactaaatttaaaaaa
tatgtcCCCAATACACCTTTAGGACATTAGCCGCCAATAGCGgtcatttt
tttgtctgttttaccaccctaaaaccgtcacagtttttttttcgcaccta
tagacaataggtagaaaaaagtgtaaaaaaaggattggatcgagtttagg
gtggtaaaacggacagaAAATGGTGgtaaaatgcccgcgcggcaattggc
ggctacggttgaaaaggtgtatttaatgTGTCTGCTAGATAATAGTTTCT
GAGACAGTTTAAAAAACTATAGAGAAGACAATTGGTTGCTAAAGGTTTGA
AAAAGGTACGCAAAGTAGTGTTAAAGTGTTGAATATTGTCTTTCGGTTTT
CTTTATCTCTATTATAATTCTTTCTGTATAAAACTGGGATTGGTTCGGCC
CGATCCCTTTGCAGTATTTTAGCATTAGGTAATAACGTATCTCCTTTATA
TACTAGAATTTCTGAACGAAGATATTTCCGAGAATCAAGATCCACTAGTG
AGCTGACCCCTCCAGAATCATCGTTCCATTTCCAAAAGATTTACGTTGGG
GGAATTCCACCAAACCTTGCAGCAAAGTCAGAAAGTCAATTCGCTGGATG
TTTGGAGGATGTTGTGATTAATAATGTGAGTTTGTCTGAAATGATGAAAT
TATAAAGATTGCGACCGTAGTCGCAGgatagtctggagatccatactctc
tattcaaacttacaccacataagcaaaaatatattatattcattttaact
aaatgctttacttcgaaaccacacgaacagagtagacggaCCCAGCTAAG
TCGCATTATGATAGACTATGGTTTTTTAACGATTTTGATATCTAGCGACT
TTTGTCAACCAGCTATAACCAAGTTGTAGAAGCGCTACTCTTTCGCTCTG
TATTGCTACATTTACCCCAACCTTGTTCCTTGCGAATTATTATCAGCTTC
TTGATGCTTAGATAACGCCAAATACTTCTCTAACGTCTActagtaacgta
aataaagcctggaatacacggttGCTGAGGAACCAAAGGCCAAACCAAAT
TTGTTGTGTTGTGCTTTTACAGTACTTGGTCATTTGCTCAATCAAcgaat
acaagtttttttataagaacaaactatataagaaaataaggcttcgatga
ccaaaatcttaagaacaagttaagaacattttaaggctttgcgggctTTG
CGGGctctagaacaccgaatttcttaggaaaatggaccaaaatactcaca
aaatggtgaaattaagaacatgttaagaacaattttaggcttaaaactta
aaactttttgatgttcttataagaaaagaaCGTGTAGCTAATTAAagagt
tttttatctttttttatccTTCCAGCTGGACTTTATGAAGCTGCACAGAA
GTCGTAGTGTTAAATCATCACTGTATTCCAATGGTAACATTGATGAGCAA
TGCACTAATGAAATATTCGACGAGATcaaaggtttgaaattttagattta
gatcaTGTTCACACACTACGGTTCCGTTTAGCACTACACATCTCAtcttt
tagaccatgttcagacctTATGGTTTTGCATCGTTccgaaactaaaaaaa
aagtcaaaaaaaagacgctacaaagcaaaacagattgaaacggtttcgct
ccaatATTTCCATCGGAATGGAACTGCTCCGAAACGCTCCGAAACTAATA
TGAATACTCTTGATCCGTAACGGAAACCATACGGGAGCGATAAGAAGCCG
TAtttctgaacatggtcttataaGCAATTTCATTATCGGGTCACCCCTCG
GGCTGCTTGgtattctagctcattttctgaaaaataacgTTGACCACCCC
TGATTTTATACCATAGTCACGCGTCAAGGGCTTTTGTATGCCATAGTTAG
ACtatctaaaaaacttttacctTACGAAAATAGTCGGCAAATTTGAGCCC
TCGAGCCTTATCAACttgattgcttataaaaaaatgtgtactaaaATTTC
TCAACCACGACTGAACGATTGTGACAATaatgaaaatagtaaaaattttG
CAACATTATTCGAGTAAGACAGATGGCCCAAATGCAGTAACGAATTTTGA
AACAAGCTGCTTTtctcaatcctttttttttagaATGGAGTAAAGAAAGA
GAAGGCCAATCTGTTTTCGAAAATAGCAATCATGTCGAAAGTGGAAGCTC
CAATTTGAAATCGATGTCCGGGAAAACAAAGGTATCATTTTGCAGTTTCA
GAACGTCCAAATAACATTCTGCAAATGCCCCTAACATccataaaaacttt
aaaatcagcTGGACACGGTGTGAAAGgagtcaaaaaaacattttggcaAT
GAAACCCTTTAGAAATTTGTTTCTGGTAAAAAGTTTTAGTATCGTGTATC
TAATGTAATTTGGATAATTTGATAGCCTCAAAAATAGCTTTGAATATCTC
CGAAACAACTAATTAAACGATAATCTAGGAGCCCGAAAGTTGGCCTGTCC
TACCTACCTTGtcagtttttggacctaccccggtggggtagaggtcctat
aaattaacctgtgttcgttcgttcgttcgtctgttaccaacttttctcag
gattgaatcataggaaccccttgatttttggtacaaaggtgcaaaatggt
ggtgggcaaaatgtgacggagcccgattttcaaaaaaaaaatagctaaaa
aacgggttttttggactttgtgaattttttttgcataaaagtagataaaa
gatggctcaagctgatttttgtaaaaaagaatttttcagctcaaaaaacg
catctttatatctataagaatcactatcaataagcatacatcaatgttct
tagccaaattactgaattttttgatgagatagatgtttttttttgctcac
gaagtcttgaatataaaaaaatatttcaagagcatgaaattttggtttct
aaacgtttttttataagaaacaaacaactaattttaatagatcgtcacta
tttgtgttttgaatgattttttaatggtcacgctcacgtagatatcaatt
atatatgtgttaaatgcataaccaggtaggtccataaaagtatcacttgt
tttttcagaaattatttattatataattcagtttctcaaaatatcttcaa
aaaatcgATCTTCCATTTCGCTTTCCAAACTCGAATCCATTTTTATCAAG
AATCTAAACTCGGCTAATCTCCAAGCAGATTCtgatcggggggggggggc
taatactaggtttgcgaggtgacgggtatgtccgagccaaaaatcctATA
AGAGAAACAATGGGCATTTTTAGGACCCTAAGAgaaacttttctcaaaat
ttttgtcgattctcactcgatttttgtccaaatttttgaaaatcacgacc
ctttgagagaggaaatttcgattttcgtgagTTTAGGGTCTACCTTACAT
GACTCAATTagctttttaatgtttttttttacccctttgagagactttcg
agggtgtgaagcAATGgggttttgaatattttggctgaacaaccaggtTA
GATAGTCACATTCGTCATATCCCTTTATAGCAGAGCGTggtatgcgcaga
atggatgatctgttacaAGATTAAAACTCTGCTGGTACGCAACGTAGCCT
ACGGTtctaacgttagataaacggcTCACTTTTGGTCCTGCTTATTCTAA
TTGTGAGTTAAAGTGAGCAAAAAATTAGCTGTCCAAAGTCAATGCATTgg
cctcttttgacgtcaatgcaatgtcttcttccAATCTACTCCAAGCAAAT
GTTTTAATTACCAACTTATtgcccactttttgcctactgtaataattaga
ataggcagggcgaaaaatgggccgtctaaactagagcatAAACTTTGCTT
TGACGTTTAGTGCCAAAACAAGTGATCTCtatacacgcttttcttttgtc
atctaGTACGAAGATTCAGCGAACTCAAGCATGTGGATCATCATCGGCGC
ATGCGTGGGAATTGTTGTCACCACTGCTGTCGTCATCATTGTCATTCGCG
TTCGCAAAAATCGCCGACGAAACGCGCGAAGGTATGCCTTATTCtagtct
gttttatttacctaTACAATTGACGCtttctaattcaatttttaagggaa
attgcattttcatattttcattgaataagaGAGCAtattgaatagtagag
cgtcaGTTTTGGAGAGTTTCTTGTTTACGGTGACTTTATCGAATAgcgga
gcgtatcgaataatagaacgtcgaattagagagcgtcaacagTACTTTCT
TTTGAATACACATTTCTCGACATAAATCAGGATCTCCTtgggcctcgttt
tcaaattgaATAATCACTTCAAACGACATTTACACATGATATATGTATTC
CTAAATGaccgttttcaattttgatacaaaaatgCAAACACTAGAAAACA
TTAATCTTGTCTGACGACGTTAAAGTACCCGGCATCATAATATTCAGCAA
CTAACATAGCATCTGACGAGGATTTACTACACAGATAAATCACCAAGACC
ACAATAACAATCTTATCTTCAAGAATTTATCTTTCATGTAACTAATGTTT
CAGAAATCCCAAATATTTTCCTCGCATTTTggcagatttttcaaaattta
tttaaaacattCATTTGTTCATTCGAaggattttaaaatatttaagcTCA
TTTCTTCTACAGAAATTAATCCTGTAAtccttctttataagaataaagaa
tatctttagaATTAAGTGACtggctttttttcaaatttagacaggaaaaa
attatgaaatttttaggCAATTGAAGAAGTTTTCCCCAATGAAAACTTTT
ATAGCCTTCTTCAATAGGGCTGTGACGAAGTTTTCCCTCAAAAAGTTTTC
GCCGACAAAGTTTTCTCcttaaggcgaaaataaaataatgtagtgtttcc
ggaaaccagacgggtgaaaaaaaaattctgacccGCCGGCCAAATacttc
gttagtagttgataaattagtattcagggcttacttcatactgtttatAC
ATGAAATTTATCtataaagttctatttcaattatcttaagttatcaaaaa
tagcagagaaaattttttttctagccggccgcatgagagcttttctcctt
cacccgcattctggaaacactacatttttttattttcgcctaaggTAGAC
TTTTTCTGTTAAACAACTTACCTTTAAATTGTAGCTCTTTCTTAAAATGT
GATAAACCAGACTCAAACCCCTTTTTTGTTGAGTCAAAACGTCTATGTAC
CAAAAAGCAGGATATGATTAAAGAGATCTTAGTATCGTATAAAAACTCTA
TCCACCAACATTCTTATTGATGTAAAGCGCTATTATAAACGACTCCGATC
CATTTTCTgatcgaaaaaaaatccaagaaattattttccttCCGTTAAAT
TTCGAAATCTGATTTAGGTTAGCTATCAAAACTACTAAAGATATTGCTTT
CTCCAAAAtcctaaaaacatcaaaaacacatCAATTATCCATTTTACAGT
GCTTTTCGTGGAAAAAATTATGAACTAAACGATACTTTCGGTAGATAATA
CGTTTTTCTTGGAAGAACACACAAAGTTTCGATACttccggatgttctta
acttatttaGTTGTAAGCCAaaatatgttcttaaaatattcttaatttca
ccaaTTTGTAAGTGTTTTTGGGATTTCctaaaaaattgtgttttataGTC
CATGAAGACCTAAAAAATATtcgtaacttgttcttaataactTGCACTTC
GAAGTCTCTTGTTCttctatagtttgtttttagaaaaatacgTGTACCGT
CTGAGAAATACTTAAAGATGTTTTTCCTTTTGTGAGGGTGGTTCTTCTGT
ATTGAGATCTATCTGTTGGGATTATGAAATCATTTTAATTGAAGATCGCT
TTACGAGATCTGTAAAGTAAATCAGTAATTTACTCCTAACCCTCTATGTA
tttaccataatttttttccacgaaacgagaatatttttgaagaactTGAA
AACGACTAGGCACACACTAAGTAAAACGACTTATGCAATACTTGAGAAAA
CGTACAGTTATTATATCGAGCTATCTCCTTGATGATACCCTTATTATGTA
CGGGAACCCAAAGTCCTCACTTCCTTCCAttatctcaaaaaaaaaactct
aagcaaaaaaagaaaagtttaaaaattcttATCATTACTCAAATCAGAGA
CCTCTCAGTGGAGTCACGCCATCACACCGAAATGTTTTTCTTATCAATCG
CGCATCATGCGTTTTGAAATCATAGAACACGTCATCACGCTCAAAAAATG
CCTAATCAAGCCATCACGCAATCACACAAACCGCTTGGGGGTCATATTAG
TTCGAATGATTTAGATAGAGAAATGATACTAGAGAAATTAAAGGTTTCCA
GGTCTTAATTTAACTCATTAGTGACTGGGAAACAAGAAAATGGATGCAAA
GTTGAGTCGTTTGACTCTGATGGAATATATTCTGTAGTATTCTATACAAG
TGTGGCGGAAATATTGGAGTCACTCCTAGAGGAAGTAAGTTCATGGTGTA
GTATACCCTTAATTCAGAGGGCGTATACCAGAGGCGGCATAGCCTTAAAA
CAGAGGGCGTATACTAGAGTCTCTGTACAAAAGGCAAGACAGGTGGTGTG
AACATCTTAGGTCCTAAGAGAATCTAGACGTCACAATCAAGTGACCAACC
GCCAAACCTGTCACTATCAGTATTCTAAGGAATGCGAAAGCGGAAACCGT
CAAGGGTACAACGAAGGGAACCGTTTGTCAGTAAACTAAACAAGGCCTTA
AGTGGAGTGTATGGTGAAACGAACGCTTACAGTAAATGACCGTATTACCA
ATAGAATAGACGAGCACACTGCTAACAGACAATACAATACAAAACAATGA
CACTTGAGCAAACAGAAGATAAGTTATTAAAATTCATTCTCAAATTTGTC
TTTTTTGGTTGTGGTCAGACGTAGCTTTGAAGATGAAGTTCACTATTATT
GttttgtattcatgatattcattacgtaatggtTTCTATGGAAACACCCT
GCCTATTACCAGTAGCgacaatttttaaacaattttttatctagCTCAAA
TTTTCCACTCGTGGCAAAAACTGGGATGttttcgtagaaaacattacttc
ACGAGAATCATGAATTTCACACATAATACTTGTATATTGATAGATTTCTG
CTGAGTCGCAATGGCACAAATCCATGAAAGACCATAAACACAATCTAATT
CACTCGACATTATTTCATTGTCCAATCCGAAATACCATAGAGACACCCAA
AACAAATACTCCCATAATAATATTGTTTCTGCTTTGACCATTTTAGATAC
AGTGATCACTATCTCCGTCAAACAGCCATGACCTTACAAGAGGAAGACAC
ATTCCCAACAGAACAAAAATGTATCCGTGAAGAAATTGCTAAGAGACGTC
TCTTAAAAACCTTCAGTCCCGTACGTAAAGAGTTTTACGTGTCCCCATCA
AACGAAGGCTCGACCAGGACGATCCCACGAAATCTCAATGAACCCATCTA
CCAATCACACGCTGTCTTACATCATGATCATCCGtacattggtcaaaatt
ttatcaaccCATTAGCGCGGAACCATACACCTCAACAACATATCGGGACC
TCGATACAGAACAACTATAGTTCGTCACCCTTCCACCATCCGTTGCCGCA
ATCAGTACCGCAACAGCGCCGCCATGACAGCCAGAGCGACACAATGTGTA
GCCATAATTCAACCAGGTATCAAGTTCCTGTCATGGTGAGACATGATTCG
ATGAAAAGCTCCATTTCACAGCAATCGAGCTCTTTCTTTGAGAGATCTTT
GACGAATGGTGAATGA Coding sequence (CDS) from alignment at sc0000031_pilon:633189..641454+ >XLOC_045236 ID=XLOC_045236|Name=XLOC_045236|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2214bp|location=Sequence derived from alignment at sc0000031_pilon:633189..641454+ (Clytia hemisphaerica_ch_hm2_pilon) ATGGGTGAACAGAACATCACAGACATTTCATGGCGATTTGTACAAATGAT CGTTGACAGCCGCAAGACAGATGTCCGATATTTCGATGGATGGGTGAACA GAACATCACAGACATTTCATGGCGATTTGTACAAATGATCGTTGACAGCC GCAAGACAGATGTCCGATATTTCGATGGAATTTCTGAACGAAGATATTTC CGAGAATCAAGATCCACTAGTGAGCTGACCCCTCCAGAATCATCGTTCCA TTTCCAAAAGATTTACGTTGGGGGAATTCCACCAAACCTTGCAGCAAAGT CAGAAAGTCAATTCGCTGGATGTTTGGAGGATGTTGTGATTAATAATAAT TTCTGAACGAAGATATTTCCGAGAATCAAGATCCACTAGTGAGCTGACCC CTCCAGAATCATCGTTCCATTTCCAAAAGATTTACGTTGGGGGAATTCCA CCAAACCTTGCAGCAAAGTCAGAAAGTCAATTCGCTGGATGTTTGGAGGA TGTTGTGATTAATAATCTGGACTTTATGAAGCTGCACAGAAGTCGTAGTG TTAAATCATCACTGTATTCCAATGGTAACATTGATGAGCAATGCACTAAT GAAATATTCGACGAGATcaaagCTGGACTTTATGAAGCTGCACAGAAGTC GTAGTGTTAAATCATCACTGTATTCCAATGGTAACATTGATGAGCAATGC ACTAATGAAATATTCGACGAGATcaaagaATGGAGTAAAGAAAGAGAAGG CCAATCTGTTTTCGAAAATAGCAATCATGTCGAAAGTGGAAGCTCCAATT TGAAATCGATGTCCGGGAAAACAAAGaATGGAGTAAAGAAAGAGAAGGCC AATCTGTTTTCGAAAATAGCAATCATGTCGAAAGTGGAAGCTCCAATTTG AAATCGATGTCCGGGAAAACAAAGTACGAAGATTCAGCGAACTCAAGCAT GTGGATCATCATCGGCGCATGCGTGGGAATTGTTGTCACCACTGCTGTCG TCATCATTGTCATTCGCGTTCGCAAAAATCGCCGACGAAACGCGCGAAGT ACGAAGATTCAGCGAACTCAAGCATGTGGATCATCATCGGCGCATGCGTG GGAATTGTTGTCACCACTGCTGTCGTCATCATTGTCATTCGCGTTCGCAA AAATCGCCGACGAAACGCGCGAAGATACAGTGATCACTATCTCCGTCAAA CAGCCATGACCTTACAAGAGGAAGACACATTCCCAACAGAACAAAAATGT ATCCGTGAAGAAATTGCTAAGAGACGTCTCTTAAAAACCTTCAGTCCCGT ACGTAAAGAGTTTTACGTGTCCCCATCAAACGAAGGCTCGACCAGGACGA TCCCACGAAATCTCAATGAACCCATCTACCAATCACACGCTGTCTTACAT CATGATCATCCGtacattggtcaaaattttatcaaccCATTAGCGCGGAA CCATACACCTCAACAACATATCGGGACCTCGATACAGAACAACTATAGTT CGTCACCCTTCCACCATCCGTTGCCGCAATCAGTACCGCAACAGCGCCGC CATGACAGCCAGAGCGACACAATGTGTAGCCATAATTCAACCAGGTATCA AGTTCCTGTCATGGTGAGACATGATTCGATGAAAAGCTCCATTTCACAGC AATCGAGCTCTTTCTTTGAGAGATCTTTGACGAATGGTGAATGAATACAG TGATCACTATCTCCGTCAAACAGCCATGACCTTACAAGAGGAAGACACAT TCCCAACAGAACAAAAATGTATCCGTGAAGAAATTGCTAAGAGACGTCTC TTAAAAACCTTCAGTCCCGTACGTAAAGAGTTTTACGTGTCCCCATCAAA CGAAGGCTCGACCAGGACGATCCCACGAAATCTCAATGAACCCATCTACC AATCACACGCTGTCTTACATCATGATCATCCGtacattggtcaaaatttt atcaaccCATTAGCGCGGAACCATACACCTCAACAACATATCGGGACCTC GATACAGAACAACTATAGTTCGTCACCCTTCCACCATCCGTTGCCGCAAT CAGTACCGCAACAGCGCCGCCATGACAGCCAGAGCGACACAATGTGTAGC CATAATTCAACCAGGTATCAAGTTCCTGTCATGGTGAGACATGATTCGAT GAAAAGCTCCATTTCACAGCAATCGAGCTCTTTCTTTGAGAGATCTTTGA CGAATGGTGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000031_pilon | genome | sc0000031_pilon:633189..641454 + |
Properties
| Property Name | Value |
| Aaloc | 589-1107:7748 |
| Aaloc | 463-585:4307 |
| Aaloc | 367-462:2486 |
| Aaloc | 259-363:1726 |
| Aaloc | 91-258:808 |
| Aaloc | 1-87:1 |
|