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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:327649..331963+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045224 ID=XLOC_045224|Name=XLOC_045224|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4315bp|location=Sequence derived from alignment at sc0000031_pilon:327649..331963+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACGCAGCAAGGAGAAAATCGTAAGTAATTTCACACATCTATAGTAA
AATACCGGAATAAAATCTTTGACTTGAGGAGAACGCGTAAAGCTCGAAAT
CCTTAGAAGGTTGTAAAATAATGTTTTCGAAGCAATCAAGTTCGGAGGGT
TACAAACAATTTTATATTACATTGATGTGAGATttagtagcgtggtgggt
cgaccaAAAGCTTTGGGCAAACTTGGGATGAGACTTTCGAAAGTTGGGAC
GTTGGTGCCTCCCTTATCGAATGTGAAATGAGGAGGGAGTTTATACAGCT
TTTCGAttgtagccgccaattgccgcgcaaGCATTTTTTGCCCGTTTGAC
CACCCTAAAACAGTCCCAGTCTTCGCGCCTAAAggcaatagaaaaaagtg
ttaaaaagggattggatcgagtttcgggtagtaaattaaataataaagtt
gcacgcgcctgaccgcgcaaCTACGGTCGAAAATATGTATTATATTAACG
TGAGATTTAGTATTGTGGTGGGCCGACCAAAAGCTTTGGGCAAACTTGCT
GGGATGCAATTTTCGAAGGTTTGGATTTCGGCGCCCCCTATCAAATGTAA
AACGATTAGGAGGAAATTGGAGTTTATTGGTAGCCGATgaaaattttata
ctttttaggtttagaaaaagaaaaataaacaagtaaCTGTATTTTACATA
ACATTTAACATTTTGATGTTTGACATTTACATTTGACGGAAAGGAGGGAA
CCAGCTCGAGCTTGAAAATGTGAATTGAATGACCCCACTCGATGTTCCTT
CTGTCGAAAATATACGAAAATTGTTTGTTTCGGTGGtgttaaatttcatt
ttctggatttttttgataagcatttgattgacgtttactTATTCACGCCA
GTATCTTCGTTGCCTAGAAAGCCGGTGACGAGAAGCCGATGACGAAAACT
CGTATGGCGAATCCtatctttctgtttttttttttaatatggtGATATGG
CTACGGTAACAGATTATGGGGCTCATTTTCAACTAAAAATTACTTGGATA
AGAATAGGCTAGACAAATTCAGTTAGGGCAAAGGTGCTTACCCGTTTTTG
GTTcaaaattacgtcattttcgcATTTTCGAGAGAGATCTCTACATTCAC
AAAATTTCTTCTAACtaatttgaaaactttaattCCCACAATGGCAGCTT
TTCTTCATGAAGTTTTGTAACCGACTTTTAAACttatttataagtttttt
taGCGAGGAAACTGAGGTATACAACAAGagacaccttttcgaccgtagtc
gcgcggtcaggtgcgtgccactttattgCTAATTTATCACTCTAAGCTCT
AATCTAAtcccttttttacactttttctattgtctttaggcgcGAAAAAA
TGACGGggatggttttagggtggttaaacagacaaaaaatgtccgcgcgg
taattggcgggtacggtcgaaaaggtgtattatagcAAAATGAGAACATA
TATACAAATTACAAGTAGGAACAGATGTTTGTGAAAAACGTCAATGTCAG
AGGAAGACCTTTTGAACTAAAGGTAAAGATCCGGTTTCTCTTTAATCACA
CCACGCAACTTCGTGATATACGATAAGTGTTAGTGTTTTGTACAATGACG
CAGATTAGGACCTGAGTGAGGAAACCCTGCACAAGTGGCAAGGGGGTGAA
TTGTGGAGGCGTAGAAAATATCAGAATTGATTTTTaactcaaaaatatca
atttaaattattaaaataattcaattcCCTCAGAACTGTAAAGGACTTAT
TTTGAAAGCGTATTCTTAGCTGATCTTTTCGGCTGCGCTGCCTCAAAGGT
TTAAAGTGGTCAAACCATTCAATCCGATGGGAGAAAAGGATAAATaataa
catccctgtctcagtgccccggtggaactttttccctcagtaggaatgaa
aatttctgtcgaaatcccaatggggatagaaaatctattgtttccagttc
gaaaattccagtggggatggttttgaagtgcaatttttccattcaacttt
ttaggtattttttccaccggggacgatttttttgccaattttcccagtgt
gtggggggggggtccaccgggtctgtgacacaggggtgtataataAGATA
TAGGTCTTCGACCAAACTTTCTATTACTTGCAATGTCTAAAACGATGAAG
TGAACTCATTAAGTTGACAGCCAAACGTTGGTgggatacacgcttttttt
acaagaataacttctataaaaaTATCAGGGTAAGATTTCGAagttagaac
aataggcctattgtttagaacaatataaaaataagaataatgctcactcT
TAGCCAAAGtaaactattcttataaaaaagcgtgtattactCTTTCTTTT
GATATGAGTTGTAAGGAACATATAAAAAGGACAAGAAATTGCTAAGCATG
CGGAACTTGATACCACAATGTAAACATAGCCTTATAGGATaacctttttt
tcaaatccatctattcttgtttttgtattttttgacagTGTAAAAATGAC
ACTTCCAGAAGACTCAACGGTGGAGTTCGATCAAACTGACGAAGCCTTTG
AGGAGGAGGGTACGATCAATCAAACCGGTCTATCGGCACGGGATAAATTA
ATTAAGGAAGGAACTGAACTAGGTTACAATACCacaaaacacgaacaaat
acaacaaagtacaaaacagcaggatcaaataagcaagtcaaaacaagaaa
atatctTGCACAGCGAGGAAGATAAAACAGTATGGCGCACTGTACAAAAC
ACTTGTTTGGAAGATAAGCCATTGAGAAATCGTAGACTTGGTCTTATTCA
CCAACAGTATTCTGCTTCACATGAAGATTTGAGAAACGTATCAAACAATA
ATCGGAGATTATCGAAAGATAATTTGAATTTATCGGCAAAAGATCTTCAT
TTACGAGGTTCTAACAGAGGTTTACGACGAGTTCAGGATACGACTGTAAA
CCAGCACCATCAAAGAGCTTCGACAGAAAATTTACATTTACTACATAGAA
ATCAACACTTGCGACGGGTTTCCGTTCCACATTTGGATCAAACGAGGAGC
TTACCTGTGAGCCCGGTCATGTCTCCACGCTTAATGCGTCGTGCGAAAGA
AAACTCAGGGTTCATACCTTGTCCACCTGATTCTCCGAAATCGAATCGCA
AACACATAAGGAGGTCAAGCAACACAAACTTGAATCACATCAAAAATATG
AGAAATCCAGAATCCCATTTGACAATACAATGTGCAGAAGATGAGGAAAT
TAGAATTTTAAACTTATCTGGTGGAAAACCTGTCAACCCAACGGAtgata
ttttgttaaaattcgCTATCCATCGATCACAAAGGTAACGTCCATAAGCT
CGCCTACTTCACAATAAACTCTCCCTATTTCGACCTATGTTATTTCGGTC
TCCCCATAGCCCAAGTTAATTTGACTAATTTGTGAGCGTTCGAGTTGAAG
AGAGGTTACAATGGATACAATGGACAATTTAAATAAGACGAAGTCAGGGA
TGGAGGTGTTGCCCATAAGGGGGGAATCATACCTTTGTTTCAATCGTAAt
aattattttcttcaaattttcaagcgAAAAGAAATTACAGTTCttttttt
AAACGTTCTTTTTTATTGATGTTTCGAATCAATTCTTTTTCAGTGTGAAA
TCATTGCCGAACGCCATGTCACCACCACCGACAAATATAAACCGACAACT
ACCAACAAATTACTCGACTGGACGACGAAAATCGTTGCATAATTTTCAAC
GCTGTCAATCGGCTATGAGTTTACCGAATTCTCCACCGCAAACACCGATC
GGTAACGCCGATCATCCATCGGGAGATTATCTTGCTAGTCGGCGTAGAAC
GGTAGCGCTCGATAGAGGAATTCAACTTCGAAAGACATTCGAGGAATGGT
TGAACACAAAAACCCAAGAAAATCGGAGACGTTCGTTACACACGCTACAC
GTGAAAGAAATCGAACGACTACGCGAAGAACAATCGAAAAAAGAACGATT
CGATCGAGGAAAAACATTCGATGAatggaaatatgaaaaagaagaacGAT
TACGTCAGCAAATATGTCACGAGAAAGAGAAAACGAAAATTCTAAGCGAA
CAACAAGTGGTTAAAGAAAAGACAAACGAAGAGTTAAGAGAAAAGAAGTA
TAATGAATGgcttgttaaaaaattcgagCAagaattgagagatgaggaac
agaaaattgaagaattaagaaatagagagaaactgaaacagaagaaacga
cgaaattcaaaataa Coding sequence (CDS) from alignment at sc0000031_pilon:327649..331963+ >XLOC_045224 ID=XLOC_045224|Name=XLOC_045224|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2982bp|location=Sequence derived from alignment at sc0000031_pilon:327649..331963+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACGCAGCAAGGAGAAAATCATGAACGCAGCAAGGAGAAAATCTGTA
AAAATGACACTTCCAGAAGACTCAACGGTGGAGTTCGATCAAACTGACGA
AGCCTTTGAGGAGGAGGGTACGATCAATCAAACCGGTCTATCGGCACGGG
ATAAATTAATTAAGGAAGGAACTGAACTAGGTTACAATACCacaaaacac
gaacaaatacaacaaagtacaaaacagcaggatcaaataagcaagtcaaa
acaagaaaatatctTGCACAGCGAGGAAGATAAAACAGTATGGCGCACTG
TACAAAACACTTGTTTGGAAGATAAGCCATTGAGAAATCGTAGACTTGGT
CTTATTCACCAACAGTATTCTGCTTCACATGAAGATTTGAGAAACGTATC
AAACAATAATCGGAGATTATCGAAAGATAATTTGAATTTATCGGCAAAAG
ATCTTCATTTACGAGGTTCTAACAGAGGTTTACGACGAGTTCAGGATACG
ACTGTAAACCAGCACCATCAAAGAGCTTCGACAGAAAATTTACATTTACT
ACATAGAAATCAACACTTGCGACGGGTTTCCGTTCCACATTTGGATCAAA
CGAGGAGCTTACCTGTGAGCCCGGTCATGTCTCCACGCTTAATGCGTCGT
GCGAAAGAAAACTCAGGGTTCATACCTTGTCCACCTGATTCTCCGAAATC
GAATCGCAAACACATAAGGAGGTCAAGCAACACAAACTTGAATCACATCA
AAAATATGAGAAATCCAGAATCCCATTTGACAATACAATGTGCAGAAGAT
GAGGAAATTAGAATTTTAAACTTATCTGGTGGAAAACCTGTCAACCCAAC
GGAtgatattttgttaaaattcgCTATCCATCGATCACAAAGTGTAAAAA
TGACACTTCCAGAAGACTCAACGGTGGAGTTCGATCAAACTGACGAAGCC
TTTGAGGAGGAGGGTACGATCAATCAAACCGGTCTATCGGCACGGGATAA
ATTAATTAAGGAAGGAACTGAACTAGGTTACAATACCacaaaacacgaac
aaatacaacaaagtacaaaacagcaggatcaaataagcaagtcaaaacaa
gaaaatatctTGCACAGCGAGGAAGATAAAACAGTATGGCGCACTGTACA
AAACACTTGTTTGGAAGATAAGCCATTGAGAAATCGTAGACTTGGTCTTA
TTCACCAACAGTATTCTGCTTCACATGAAGATTTGAGAAACGTATCAAAC
AATAATCGGAGATTATCGAAAGATAATTTGAATTTATCGGCAAAAGATCT
TCATTTACGAGGTTCTAACAGAGGTTTACGACGAGTTCAGGATACGACTG
TAAACCAGCACCATCAAAGAGCTTCGACAGAAAATTTACATTTACTACAT
AGAAATCAACACTTGCGACGGGTTTCCGTTCCACATTTGGATCAAACGAG
GAGCTTACCTGTGAGCCCGGTCATGTCTCCACGCTTAATGCGTCGTGCGA
AAGAAAACTCAGGGTTCATACCTTGTCCACCTGATTCTCCGAAATCGAAT
CGCAAACACATAAGGAGGTCAAGCAACACAAACTTGAATCACATCAAAAA
TATGAGAAATCCAGAATCCCATTTGACAATACAATGTGCAGAAGATGAGG
AAATTAGAATTTTAAACTTATCTGGTGGAAAACCTGTCAACCCAACGGAt
gatattttgttaaaattcgCTATCCATCGATCACAAAGTGTGAAATCATT
GCCGAACGCCATGTCACCACCACCGACAAATATAAACCGACAACTACCAA
CAAATTACTCGACTGGACGACGAAAATCGTTGCATAATTTTCAACGCTGT
CAATCGGCTATGAGTTTACCGAATTCTCCACCGCAAACACCGATCGGTAA
CGCCGATCATCCATCGGGAGATTATCTTGCTAGTCGGCGTAGAACGGTAG
CGCTCGATAGAGGAATTCAACTTCGAAAGACATTCGAGGAATGGTTGAAC
ACAAAAACCCAAGAAAATCGGAGACGTTCGTTACACACGCTACACGTGAA
AGAAATCGAACGACTACGCGAAGAACAATCGAAAAAAGAACGATTCGATC
GAGGAAAAACATTCGATGAatggaaatatgaaaaagaagaacGATTACGT
CAGCAAATATGTCACGAGAAAGAGAAAACGAAAATTCTAAGCGAACAACA
AGTGGTTAAAGAAAAGACAAACGAAGAGTTAAGAGAAAAGAAGTATAATG
AATGgcttgttaaaaaattcgagCAagaattgagagatgaggaacagaaa
attgaagaattaagaaatagagagaaactgaaacagaagaaacgacgaaa
ttcaaaataaTGTGAAATCATTGCCGAACGCCATGTCACCACCACCGACA
AATATAAACCGACAACTACCAACAAATTACTCGACTGGACGACGAAAATC
GTTGCATAATTTTCAACGCTGTCAATCGGCTATGAGTTTACCGAATTCTC
CACCGCAAACACCGATCGGTAACGCCGATCATCCATCGGGAGATTATCTT
GCTAGTCGGCGTAGAACGGTAGCGCTCGATAGAGGAATTCAACTTCGAAA
GACATTCGAGGAATGGTTGAACACAAAAACCCAAGAAAATCGGAGACGTT
CGTTACACACGCTACACGTGAAAGAAATCGAACGACTACGCGAAGAACAA
TCGAAAAAAGAACGATTCGATCGAGGAAAAACATTCGATGAatggaaata
tgaaaaagaagaacGATTACGTCAGCAAATATGTCACGAGAAAGAGAAAA
CGAAAATTCTAAGCGAACAACAAGTGGTTAAAGAAAAGACAAACGAAGAG
TTAAGAGAAAAGAAGTATAATGAATGgcttgttaaaaaattcgagCAaga
attgagagatgaggaacagaaaattgaagaattaagaaatagagagaaac
tgaaacagaagaaacgacgaaattcaaaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:327649..331963 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 871-1491:3695 |
| Aaloc | 25-867:2540 |
| Aaloc | 1-21:1 |
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