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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:205726..210209+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045215 ID=XLOC_045215|Name=XLOC_045215|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4484bp|location=Sequence derived from alignment at sc0000031_pilon:205726..210209+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTCCCAACCTCGTCTACTGCAAAGCGAAAGCAAAGGTTTTTTAG
TACCTTGTTGACAAATTTCTCTTCGCGAACCAATGTTTTGTAAATCAATT
TAACCAGATTAGTTGTTCAGCTCAGTAGAGTAtcaagtaataagattctt
ggCTTTTTACATATGTTTatccaagtttgttttttttgaaatacactatt
ttttttctcttgtcGTTCAATTTTGTTAGGGAAGTCGTTGTACTGAGTGA
TGACGACAATGATAAAGAAGATGGCGCCGTCGCTAATCTGCTGGTACCGA
AGAAAACCGAAACAGAGAATTGCGATGGAGACGATCTTACTCATCTATTG
AATGACAAAGATAATGACATCATCGTCAACCAACCGGTACCGAAGAAAGC
AAAAACAAATGATATTGGTGGAGATGACCTCACTTATTTATTGAATGACA
AAGATGACGACATCATCGCTAAACAACCGGTACCGAAGAAAGCCCAAACA
AATGATAGTGGAAAAGATGACCTCACTCATTTACTgaatgatgacgatga
tgatttAGCGTTTTATGGAATCTCAGTAAGCTATAGCGAGctcctcacta
aaaaccgggatttttcatctcgtttcttagtgagttcagCCATAGTCACA
AAGTGCCAACATTCTCTTCTTGTGACTATGGTTCagctttgacgattttt
gaaaaatagaagcctttcaagtgttttgacgaaAATTCGATtatttgcta
ctgcaggagcttcgaaagttaaaagtgacgtcaaaaaatcgaatgtttag
agcccgaaaacccgggctcaaaacattcgaaaaagtcacaaagtggaata
gacgttaattgcgtcaaaaaacgcgggtgacgtctagtataggctaagtA
AGCTAaggatatttcaaattttacttaaaGATAAACAATTAATATGCTAT
ACTGCTTTGATTGACCTTGGTCAATCAACGTGGTATTCTATTTAGTTGTC
GATACAATAACACTAAGAGAGTCCTGTTAtactcactgacctttatataa
ccctggaccaagcaatatgtgccatctttgattggagtttttttagaatt
ggtacccaaggagaagccattgcaatgctaaaatTTAACGTCTAACgtcg
ctacatcatcaaaagaatttgaggaaaagtagacctagcgctctcgatgc
atttacaccgctatcgagtagtgccgacattagggtaccaattttcaaaa
aactccgatcaaagatttggcttggccgggattgagaagctttgtccggG
GTATACAAAGGTCAGTGGTTATactatataaataaaaaaattgattggaG
TACCACAAACTTTTTTCGTCAGCGgacgaagacctgaattaaaagCCGAA
GACCTGATTCAGCGGTAAATAGTAGAAATCTGTGACCGTTAGTTCAGGTC
AGGAAAAAGGAATCTGTGGAGGTATGTGCACATAAAAGTAGCCCCCAGCT
GTTATATAACTGTATCATTTTAATTCGTTAATGATTTTATTATTCAGGCT
CAGGAAGATGTTACATCCAAAGTTTCGTCGTCAGAGTAAGCATCATATTT
TGTTAAAACAGAATTCAGTAcaagcttcttttttttataagaatggtgta
aatccatttcatcatgatactttaatcgtagaaattttagcgagactaat
tttagcgttttagcgagtttttcctattttcggcgaatcgacagatcgcc
aaaatttatccacgcgaaattcctggttatattgccttgatacattttta
tcaataggaaggttttcagtgcaaagaaatgctagaaaacgaattaaatc
aataatgtaataattatgagtattcgctaaaatttctccacgcgaaattt
tttgaaatcgtgattcgctaaaataaatccaaaaaaaatcaagattttcc
tgactcactaatatacgctaaaattagtttcgctaaaatttctacgatta
aagtattcttaacttttttgggaaaatcatcctaaaatattcttacagaa
ttcttaggttaggatcctaattcagactagatttaacatttagtacatac
gtctcaagcataaaatggcatttttgtgaaagaagtgagccttacttggg
gctaattgacaatttattattgaaaatgctttaaaaatgacattcttagc
ttgagtagcaaaattccatgatggaattcttagcattattctcaattttt
tggccattttcattatggacattctcataaagtgtattcttataaaaaaa
tgcgtgTACCCTTTTATAAAGGCTTTTGCTCTGTGTTtcacaaaaatcag
tgaaaatcaatttatattaataaattaaaaacaacaaatcaagTCTTTTT
TCTcgcaaaatgttttgaaagctGCATTCGCAAAAAGTAAATTCCTgcga
aatgcaaaaatttcggCAAAAGCTTTGTTTACGCAAAAGATTTTCCCCTG
GAACTATGTTTTTGCAATATACgttcaatatcaaaaatctttttcttgtg
CTATAGAGCTCCACCTCAAGAAGGTTCCAAAGAGTTCACAGTGCTGTCTT
GGAACATTGATGGTTTGGAAGACGAATATTTGATGGAGAGATTCCAAGGA
GCTCTGAAAGACATCTTGAAAAAATTACCGACCATTGTGATGCTTCAAGA
AGTTGTTCAACAAACATTCCTCTCTCTTTTTATTCTCTTCCCGTAAGTCC
TAatttctgattttgaaaatgtCGTGTATTCCTTATCACTTGGAATAACT
ATTTGCTTCTTTTCAGTACCCCTCTTTAGAGAAAAGCCGACGGGAAAAGA
TTtccaataaattttattttattgaataaacGTCTTTTCTCTAGAAGGGA
CGTGAATCTTATAGTTGTAAGTTACTGTAAGGAAGTTCGTATTTGTCTGA
TATGACTGGCAATAGCAAAACCCAATTGTTTTCGAACCCCTAGTCCCCAT
TTTGTATGAAGGAGCTGCCATCGAAAATCTTATTTATTAGGGTGTTTACT
CGCTGACCTTtttataccctggaccaagtttctcaattccggccaagcaa
aatctttgatcagagttttttgaaaagtggtaccctaatggcggcactga
TCAATGTgtaatgcatcgagagcgctagatctactttccctcgaaaactt
ttgatgatgtagcggcgttaaggccggcgcaaatgaatccaacatttcca
attcattgttggacgaaatgttggacgaaaagtcacgtggaaaaatttga
aaagttgcatgaaaagtcatttgcgcaaaaatgtcaaacattttcatcca
acacgATTACGCAAATTCATACAACATTGAAACCaacataaaagtgacgt
caatctcattaaaaaatgttggatgaaaagtttGACGGCGATCAAtcttc
atccaacatgatttccaacaattttcttaaaaagttgcaattttaagACT
TGCGCAAACGaacccaacatttgatccaacaataatgttggatcaaatgt
tggattcatttgcaGAGGTTATTggaacactgcaatggcttctttacggg
caccaattcaaaaaaaaaaccttcgatcaaagatggcggatatagcttgg
gccagggatatataaaggtcagtgggttcACTACATAAAAGCACAATCAT
CAACTAAGCGAATATAAGTgaactaaaattttgattcacaagTTCTGTCA
GTTGCACTTTCAACATTTTGATACTGGGAtcctattgttttcaaaatcac
CTTAAAATAATGGGATAAGTGaaaaaaaggaatataaaaCGCCTTTATAC
ACCTCCAAGTTTACGGACGGTTCATTTTAGTCTTTACGTGATTCGAACAT
TGGAGCACGATGGTTATTTCAATGTAATCATGTTCCTAAAGAAACCGCAC
GTGAAAGTCATTGGTGAGTTGGAGGGTTGGCATTTCTACTCTTCCCAAAT
GGATCGTCACTGTTTGTTACAAAAACTATACATTCATGGAAAACCTGTTA
CagtgatgacgtcacacttGGAAAGTTTAAAAGAATGTGCTGCAGAGaga
caaaaacaattgaaacaatgttttgaaacaataacAGACTCGCCGAGCGA
CAcaaacttcatttttgctggTGACTTGAATATGAGGGCGGAAGATTTGA
GGCAGATTGGTGGGATCCCGCCCAAAATTACAGACGCCTGGGAAACGGCT
GGAGAAGATCCAAATTCAAAGTTTACTTGGGATCTGGAACTGAATGATAA
TAAAAAATTCGGCGGTAATCGTAAACCACGTGCGCGCTTCGATCGAATGT
ATTTCAAAAGAGCACAATCGAATCCAATGCAATGTATTGGATTTGAATTG
ATCGGTTTGGAGAGATTGTCTTGTGGGATGTTCCCAAGTgatcattttgg
aattttaagcAAATTCATTCTTCCAGATGACTGA Coding sequence (CDS) from alignment at sc0000031_pilon:205726..210209+ >XLOC_045215 ID=XLOC_045215|Name=XLOC_045215|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2430bp|location=Sequence derived from alignment at sc0000031_pilon:205726..210209+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTCCCAACCTCGTCTACTGCAAAGCGAAAGCAAAGATGGAAGTC
CCAACCTCGTCTACTGCAAAGCGAAAGCAAAGGGAAGTCGTTGTACTGAG
TGATGACGACAATGATAAAGAAGATGGCGCCGTCGCTAATCTGCTGGTAC
CGAAGAAAACCGAAACAGAGAATTGCGATGGAGACGATCTTACTCATCTA
TTGAATGACAAAGATAATGACATCATCGTCAACCAACCGGTACCGAAGAA
AGCAAAAACAAATGATATTGGTGGAGATGACCTCACTTATTTATTGAATG
ACAAAGATGACGACATCATCGCTAAACAACCGGTACCGAAGAAAGCCCAA
ACAAATGATAGTGGAAAAGATGACCTCACTCATTTACTgaatgatgacga
tgatgatttAGCGTTTTATGGAATCTCAGGAAGTCGTTGTACTGAGTGAT
GACGACAATGATAAAGAAGATGGCGCCGTCGCTAATCTGCTGGTACCGAA
GAAAACCGAAACAGAGAATTGCGATGGAGACGATCTTACTCATCTATTGA
ATGACAAAGATAATGACATCATCGTCAACCAACCGGTACCGAAGAAAGCA
AAAACAAATGATATTGGTGGAGATGACCTCACTTATTTATTGAATGACAA
AGATGACGACATCATCGCTAAACAACCGGTACCGAAGAAAGCCCAAACAA
ATGATAGTGGAAAAGATGACCTCACTCATTTACTgaatgatgacgatgat
gatttAGCGTTTTATGGAATCTCAGCTCAGGAAGATGTTACATCCAAAGT
TTCGTCGTCAGAGCTCAGGAAGATGTTACATCCAAAGTTTCGTCGTCAGA
AGCTCCACCTCAAGAAGGTTCCAAAGAGTTCACAGTGCTGTCTTGGAACA
TTGATGGTTTGGAAGACGAATATTTGATGGAGAGATTCCAAGGAGCTCTG
AAAGACATCTTGAAAAAATTACCGACCATTGTGATGCTTCAAGAAGTTGT
TCAACAAACATTCCTCTCTCTTTTTATTCTCTTCCCAGCTCCACCTCAAG
AAGGTTCCAAAGAGTTCACAGTGCTGTCTTGGAACATTGATGGTTTGGAA
GACGAATATTTGATGGAGAGATTCCAAGGAGCTCTGAAAGACATCTTGAA
AAAATTACCGACCATTGTGATGCTTCAAGAAGTTGTTCAACAAACATTCC
TCTCTCTTTTTATTCTCTTCCCTCTTTACGTGATTCGAACATTGGAGCAC
GATGGTTATTTCAATGTAATCATGTTCCTAAAGAAACCGCACGTGAAAGT
CATTGGTGAGTTGGAGGGTTGGCATTTCTACTCTTCCCAAATGGATCGTC
ACTGTTTGTTACAAAAACTATACATTCATGGAAAACCTGTTACagtgatg
acgtcacacttGGAAAGTTTAAAAGAATGTGCTGCAGAGagacaaaaaca
attgaaacaatgttttgaaacaataacAGACTCGCCGAGCGACAcaaact
tcatttttgctggTGACTTGAATATGAGGGCGGAAGATTTGAGGCAGATT
GGTGGGATCCCGCCCAAAATTACAGACGCCTGGGAAACGGCTGGAGAAGA
TCCAAATTCAAAGTTTACTTGGGATCTGGAACTGAATGATAATAAAAAAT
TCGGCGGTAATCGTAAACCACGTGCGCGCTTCGATCGAATGTATTTCAAA
AGAGCACAATCGAATCCAATGCAATGTATTGGATTTGAATTGATCGGTTT
GGAGAGATTGTCTTGTGGGATGTTCCCAAGTgatcattttggaattttaa
gcAAATTCATTCTTCCAGATGACTGATCTTTACGTGATTCGAACATTGGA
GCACGATGGTTATTTCAATGTAATCATGTTCCTAAAGAAACCGCACGTGA
AAGTCATTGGTGAGTTGGAGGGTTGGCATTTCTACTCTTCCCAAATGGAT
CGTCACTGTTTGTTACAAAAACTATACATTCATGGAAAACCTGTTACagt
gatgacgtcacacttGGAAAGTTTAAAAGAATGTGCTGCAGAGagacaaa
aacaattgaaacaatgttttgaaacaataacAGACTCGCCGAGCGACAca
aacttcatttttgctggTGACTTGAATATGAGGGCGGAAGATTTGAGGCA
GATTGGTGGGATCCCGCCCAAAATTACAGACGCCTGGGAAACGGCTGGAG
AAGATCCAAATTCAAAGTTTACTTGGGATCTGGAACTGAATGATAATAAA
AAATTCGGCGGTAATCGTAAACCACGTGCGCGCTTCGATCGAATGTATTT
CAAAAGAGCACAATCGAATCCAATGCAATGTATTGGATTTGAATTGATCG
GTTTGGAGAGATTGTCTTGTGGGATGTTCCCAAGTgatcattttggaatt
ttaagcAAATTCATTCTTCCAGATGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:205726..210209 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 613-1215:3882 |
| Aaloc | 427-609:2558 |
| Aaloc | 388-423:1548 |
| Aaloc | 43-387:231 |
| Aaloc | 1-39:1 |
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