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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1816220..1817797- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045177 ID=XLOC_045177|Name=XLOC_045177|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1578bp|location=Sequence derived from alignment at sc0000043_pilon:1816220..1817797- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTTGGAAAGGGAGTACAGTGCGGAACGAAAATTTCGCAAGAAAAAA
TAAAATCCACAATATGGAATCGAAGGAGATCTACCAATACAAGGATATTG
TACTACGGGAAAAGCCGTTAACAGCTTTCAAACCGAACTTAAAAATCGTA
CAAAATATACGGCGAATCGAAAATGAGTTACGACGTCAACAAACCCAATA
CGACGATAAAACACAATGGATACGTAACGTCGTTCAATTACGAACTCATC
AACGACAACGTATCCGAAATTTAACAAACAACTACCGGCATCATACAAAA
ACCGATTTTACACCGATCAGGAAAAAACACGACAACGACGTCTATTGTCG
GATCTTAGGACAGGCATATTGCCGAGAATGTAATCTAAAAGTCAAAATTG
AAGAACGTAAACAACAGACCAAGAATTTTCTCGAAAACAACGTCGAAACA
GTAGATAAACCTTTGACGTCGAAAGAAAAAGCCGTCTATGCGATTCTACC
GACGACAGCCGTCGATAAACAACCGGGTTTGGAATATACTCAAAAATACA
ATGAAGATTTGAACCAATACAGACTTATTCCTTTGCTGAGTTCTGACGAG
CCGTTGAAAAAGACGTTTAAAAAGGCGGCACACACTGTTCAAAATGGTCG
TATCATTAACATTGTGAAGAAAACTGACAGTGAAAAAAAATCAGAAAACT
CAAAATCTGAAACAACAACGAATAACAATAAAGATACCAAAAATTTAGTG
AAAGAAACTGCGACTCCGCCAAATTCACTTCAAACACCGCCACCCACAAG
GGCAACATCCACCATAAGCCAACAAGAAAAACCGCCCATAAGATCAGGAG
GTTCTTCTTCGTTTAAACCGCGTACAGACTTAGAATGGTTCCATGATATT
TCGAAAAGACGTCGGAGCAACGTCGTACAAGATCGCAGACTTAGTAAAGC
ACCTTCAGATCATTTCGATGTCATTCAACTAGCTGAGAAACTATCCTCTC
TATTTCGCGAACGCCATTTACCGCCTGAACGGAGCTTCAGTCGAATAAGC
AATGTTTCATCAGTTGACCTCGATCCAAATGATTTGGGAAGAATCCCAAT
GGATAGAGGTACATTAAAATCACGTGCAGTTACAAGACAATCTTCAGCTA
TTTCCCTTAAACCTGTTTTAGAAACTAGCGAAAGTAGCATGAATCAAATA
TCAAATATTCCTTTTGACGGAGAGCAAGTTAATTCTGAACTCAAAGCAGA
GACAAATGGAGATTCTGAGACACAAGCCGTTGATTGCAACAGCCGGAACG
AGCTGAATTCTAGATCGTCAGAAGTGAGTGAAAATTATTCGGATAGTCAT
ATTGGAGACAATTTACGAGACGAACTTGAGGATATTAGATCACTACTGGA
TCTTGGTGGAGGAGACAGTGATGTTGAGGATGAGAGAGATGTTGGCAGAA
CATTTTCAGACGATGAGTCTTCATCAGATGAGGATGAAAATTATGGAGGA
AGGTTGTTTCCGATCATCCCACCCACTGTCAATATGACTGCGTTTAGAAA
CATTTATAAAGAATATAACGATTATTAG Coding sequence (CDS) from alignment at sc0000043_pilon:1816220..1817797- >XLOC_045177 ID=XLOC_045177|Name=XLOC_045177|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3156bp|location=Sequence derived from alignment at sc0000043_pilon:1816220..1817797- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTTGGAAAGGGAGTACAGTGCGGAACGAAAATTTCGCAAGAAAAAA
TAAAATCCACAATATGGAATCGAAGGAGATCTACCAATACAAGGATATTG
TACTACGGGAAAAGCCGTTAACAGCTTTCAAACCGAACTTAAAAATCGTA
CAAAATATACGGCGAATCGAAAATGAGTTACGACGTCAACAAACCCAATA
CGACGATAAAACACAATGGATACGTAACGTCGTTCAATTACGAACTCATC
AACGACAACGTATCCGAAATTTAACAAACAACTACCGGCATCATACAAAA
ACCGATTTTACACCGATCAGGAAAAAACACGACAACGACGTCTATTGTCG
GATCTTAGGACAGGCATATTGCCGAGAATGTAATCTAAAAGTCAAAATTG
AAGAACGTAAACAACAGACCAAGAATTTTCTCGAAAACAACGTCGAAACA
GTAGATAAACCTTTGACGTCGAAAGAAAAAGCCGTCTATGCGATTCTACC
GACGACAGCCGTCGATAAACAACCGGGTTTGGAATATACTCAAAAATACA
ATGAAGATTTGAACCAATACAGACTTATTCCTTTGCTGAGTTCTGACGAG
CCGTTGAAAAAGACGTTTAAAAAGGCGGCACACACTGTTCAAAATGGTCG
TATCATTAACATTGTGAAGAAAACTGACAGTGAAAAAAAATCAGAAAACT
CAAAATCTGAAACAACAACGAATAACAATAAAGATACCAAAAATTTAGTG
AAAGAAACTGCGACTCCGCCAAATTCACTTCAAACACCGCCACCCACAAG
GGCAACATCCACCATAAGCCAACAAGAAAAACCGCCCATAAGATCAGGAG
GTTCTTCTTCGTTTAAACCGCGTACAGACTTAGAATGGTTCCATGATATT
TCGAAAAGACGTCGGAGCAACGTCGTACAAGATCGCAGACTTAGTAAAGC
ACCTTCAGATCATTTCGATGTCATTCAACTAGCTGAGAAACTATCCTCTC
TATTTCGCGAACGCCATTTACCGCCTGAACGGAGCTTCAGTCGAATAAGC
AATGTTTCATCAGTTGACCTCGATCCAAATGATTTGGGAAGAATCCCAAT
GGATAGAGGTACATTAAAATCACGTGCAGTTACAAGACAATCTTCAGCTA
TTTCCCTTAAACCTGTTTTAGAAACTAGCGAAAGTAGCATGAATCAAATA
TCAAATATTCCTTTTGACGGAGAGCAAGTTAATTCTGAACTCAAAGCAGA
GACAAATGGAGATTCTGAGACACAAGCCGTTGATTGCAACAGCCGGAACG
AGCTGAATTCTAGATCGTCAGAAGTGAGTGAAAATTATTCGGATAGTCAT
ATTGGAGACAATTTACGAGACGAACTTGAGGATATTAGATCACTACTGGA
TCTTGGTGGAGGAGACAGTGATGTTGAGGATGAGAGAGATGTTGGCAGAA
CATTTTCAGACGATGAGTCTTCATCAGATGAGGATGAAAATTATGGAGGA
AGGTTGTTTCCGATCATCCCACCCACTGTCAATATGACTGCGTTTAGAAA
CATTTATAAAGAATATAACGATTATTAGATGCTTTGGAAAGGGAGTACAG
TGCGGAACGAAAATTTCGCAAGAAAAAATAAAATCCACAATATGGAATCG
AAGGAGATCTACCAATACAAGGATATTGTACTACGGGAAAAGCCGTTAAC
AGCTTTCAAACCGAACTTAAAAATCGTACAAAATATACGGCGAATCGAAA
ATGAGTTACGACGTCAACAAACCCAATACGACGATAAAACACAATGGATA
CGTAACGTCGTTCAATTACGAACTCATCAACGACAACGTATCCGAAATTT
AACAAACAACTACCGGCATCATACAAAAACCGATTTTACACCGATCAGGA
AAAAACACGACAACGACGTCTATTGTCGGATCTTAGGACAGGCATATTGC
CGAGAATGTAATCTAAAAGTCAAAATTGAAGAACGTAAACAACAGACCAA
GAATTTTCTCGAAAACAACGTCGAAACAGTAGATAAACCTTTGACGTCGA
AAGAAAAAGCCGTCTATGCGATTCTACCGACGACAGCCGTCGATAAACAA
CCGGGTTTGGAATATACTCAAAAATACAATGAAGATTTGAACCAATACAG
ACTTATTCCTTTGCTGAGTTCTGACGAGCCGTTGAAAAAGACGTTTAAAA
AGGCGGCACACACTGTTCAAAATGGTCGTATCATTAACATTGTGAAGAAA
ACTGACAGTGAAAAAAAATCAGAAAACTCAAAATCTGAAACAACAACGAA
TAACAATAAAGATACCAAAAATTTAGTGAAAGAAACTGCGACTCCGCCAA
ATTCACTTCAAACACCGCCACCCACAAGGGCAACATCCACCATAAGCCAA
CAAGAAAAACCGCCCATAAGATCAGGAGGTTCTTCTTCGTTTAAACCGCG
TACAGACTTAGAATGGTTCCATGATATTTCGAAAAGACGTCGGAGCAACG
TCGTACAAGATCGCAGACTTAGTAAAGCACCTTCAGATCATTTCGATGTC
ATTCAACTAGCTGAGAAACTATCCTCTCTATTTCGCGAACGCCATTTACC
GCCTGAACGGAGCTTCAGTCGAATAAGCAATGTTTCATCAGTTGACCTCG
ATCCAAATGATTTGGGAAGAATCCCAATGGATAGAGGTACATTAAAATCA
CGTGCAGTTACAAGACAATCTTCAGCTATTTCCCTTAAACCTGTTTTAGA
AACTAGCGAAAGTAGCATGAATCAAATATCAAATATTCCTTTTGACGGAG
AGCAAGTTAATTCTGAACTCAAAGCAGAGACAAATGGAGATTCTGAGACA
CAAGCCGTTGATTGCAACAGCCGGAACGAGCTGAATTCTAGATCGTCAGA
AGTGAGTGAAAATTATTCGGATAGTCATATTGGAGACAATTTACGAGACG
AACTTGAGGATATTAGATCACTACTGGATCTTGGTGGAGGAGACAGTGAT
GTTGAGGATGAGAGAGATGTTGGCAGAACATTTTCAGACGATGAGTCTTC
ATCAGATGAGGATGAAAATTATGGAGGAAGGTTGTTTCCGATCATCCCAC
CCACTGTCAATATGACTGCGTTTAGAAACATTTATAAAGAATATAACGAT
TATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1816220..1817797 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 943-1566:625 |
| Aaloc | 1-942:1579 |
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