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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000181_pilon:723..3063+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045140 ID=XLOC_045140|Name=XLOC_045140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2341bp|location=Sequence derived from alignment at sc0000181_pilon:723..3063+ (Clytia hemisphaerica_ch_hm2_pilon)
CGAGAGTGTATCTCAATTCATATTGGACAAGCTGGTTGTCAAATCGGTAG
CTCATGTTGGGAATTGTATTGTTTGGAGCATGGAATCTCACCTGATGGAA
CAATGAAGGATTCAACAAACAACAGTGATTCGTtcacttctttctttctt
gaGACTGGTGCTGGCAAACAAGTCCCCAGAGCTGTTTTTGTTGACTTGGA
ACCTACTGTAGTTGGTAAGAGATGTTTTTGTTGACTTTGTTGCAGTTGGT
AAGATTATATTTTTCTACTACATGGGTAATAGTTTTATCATTTTATGAGA
CAATCCTATGAAGAATGCTAAGAAAAAGTTATTCTGCCAAAAGGAAAGAA
TATCCATCCAGATCATCTACCAAGTGCTCAAATGCATGTCTATATTTAGA
TATATTTTTGATGACCTCGCCAAAATAGTATACTTTACTTTAGCAAATTT
CTGCAGTTGCTTCTTTTTTCAGAAGTAGAACCTTGGATAATGAACTCATT
TCTTTGCATCTCCCTTATTTTAGATGAGATTCGTGCAGGACCATATAGAG
GTCTTTTCCACCCAGATCAAATGGTAACTGGAAAAGAAGACGCAGCAAAC
AACTATGCACGAGGTCACTACACCATCGGTCGAGAAGTTATTGACCCAGT
CTTGGATAGAATCCGAAAGCTGGTCGATCAATGCAGTGGTTTACAAGGCT
TCTTATTATTCCATTCTTTTGGTGGAGGCACTGGTAGTGGGTTCTCAGCT
CTACTTATGGAGCGCCTTTCCGTAGAATATGGAAAGAAATCCAAGTTGCA
AGTCACTGTCTATCCAGCACCGCGAGTCTCCACAGCTGTTGTTGAACCAT
ACAACGCTGTCTTGACTACACATACCACTTTGGAACACTCCGATTGTGCT
TTCATGGTTGATAACGAAGCCATTTATGATATCTGCCGACGAAACTTGGA
TATTGATCGGCCAGCTTATGCAAATCTGAATCGTTTGATCAGCCAAGTCG
TCTCCTCAATCACTGCATCTCTCAGGTTTGACGGCTCCTTGAATGTCGAT
TTGAATGAATTCCAAACCAACTTGGTTCCATACCCTAGAATCCATTTCCC
GATGGCTACATACGCTCCTGTGGTTTCTGCTGAGAAGTCTTTCCATGAAA
GTTACTCCGTTCAAGAAATCACTAATAGTTGCTTCGAACCACAAATGCAA
TTGGTCAAATGCGATCCAAGACACGGCAAATACATGGCATGCTGTTTACT
TTACCGTGGCGATGTTGTGCCAAAAGACGTCAATGCAGCAATATCAACAC
TGAAAACTAAACGCACTATCCAATTTGTCGATTGGTGTCCAACCGGATTC
AAAATTGGAATCAATTACCAGCCGCCAACTGTTGTTCCTGGAGGAGATAT
GGCTAAAGTTTCCAGAGCTGTTTGCATGCTATCTAACACTACAGCCATTG
CTGAAGCATGGTCTAGATTGGATTACAAATTCGATTTGATGTACGCTAAA
CGTGCTTTTGTTCACTGGTATGTCGGAGAAGGTAAGAAAGAACATATTTA
ATGTTTCACGTCGATTCTTGATCACTAAAAACTTTACTAAGCTCTACGCA
TATGTAGTGATACGTCATCTTCAATCGCAATAAAAACTTACTTCCTCATC
GCATGGGTAGAATTACTCTTGGGTATCTAATAAGCGTCccacccgctaat
taattttttgaaaatgttttttaaagttctctcttttgccctaattctgc
tgtattagcctccttttcaaaaatttaccaACCATGAAATTTCTATTCCA
ACTTCCACatccagctattaggtacccaagcgTACTTTAAAACTTCTCTA
TTCTAACGaatacgcttttttatataattcaTCCAGCAAACTACGAAATG
ACCGTTACTAACTGTGAGGGTTTGTTTGTCTCTACAATCTAGAGGACTGT
AATTTGTTATGTTTGAACCCTACTATATTCTAAAGATAGCAGCCTCGAAA
GGGGTCTTGCTTAACCAACTCTATAACAACCAGTCTCGATTATTTACACT
TCCAAACACcatatgttgaacggtgaaaaagaatacGGCTAATACATTTT
TCGGACTCAGTCTATTTGATAATTTACAGGAGGTTTTGTAAAACCTATCA
CTTTCATTAGAATGCGATACAGAGTTGCTTCAATGATTTTATCATTACCT
TCCTCTGATGTCTGAATTTCATTTCTAGGTATGGAAGAAGGTGAGTTTTC
GGAGGCTCGTGAAGATTTAGCTGCTCTTGAGAAAGATTACGAAGAAATAA
GTATTGATGCACAAgcagaagaagatgaagaagattaTTAA Coding sequence (CDS) from alignment at sc0000181_pilon:723..3063+ >XLOC_045140 ID=XLOC_045140|Name=XLOC_045140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2670bp|location=Sequence derived from alignment at sc0000181_pilon:723..3063+ (Clytia hemisphaerica_ch_hm2_pilon)
CGAGAGTGTATCTCAATTCATATTGGACAAGCTGGTTGTCAAATCGGTAG
CTCATGTTGGGAATTGTATTGTTTGGAGCATGGAATCTCACCTGATGGAA
CAATGAAGGATTCAACAAACAACAGTGATTCGTtcacttctttctttctt
gaGACTGGTGCTGGCAAACAAGTCCCCAGAGCTGTTTTTGTTGACTTGGA
ACCTACTGTAGTTGCGAGAGTGTATCTCAATTCATATTGGACAAGCTGGT
TGTCAAATCGGTAGCTCATGTTGGGAATTGTATTGTTTGGAGCATGGAAT
CTCACCTGATGGAACAATGAAGGATTCAACAAACAACAGTGATTCGTtca
cttctttctttcttgaGACTGGTGCTGGCAAACAAGTCCCCAGAGCTGTT
TTTGTTGACTTGGAACCTACTGTAGTTGATGAGATTCGTGCAGGACCATA
TAGAGGTCTTTTCCACCCAGATCAAATGGTAACTGGAAAAGAAGACGCAG
CAAACAACTATGCACGAGGTCACTACACCATCGGTCGAGAAGTTATTGAC
CCAGTCTTGGATAGAATCCGAAAGCTGGTCGATCAATGCAGTGGTTTACA
AGGCTTCTTATTATTCCATTCTTTTGGTGGAGGCACTGGTAGTGGGTTCT
CAGCTCTACTTATGGAGCGCCTTTCCGTAGAATATGGAAAGAAATCCAAG
TTGCAAGTCACTGTCTATCCAGCACCGCGAGTCTCCACAGCTGTTGTTGA
ACCATACAACGCTGTCTTGACTACACATACCACTTTGGAACACTCCGATT
GTGCTTTCATGGTTGATAACGAAGCCATTTATGATATCTGCCGACGAAAC
TTGGATATTGATCGGCCAGCTTATGCAAATCTGAATCGTTTGATCAGCCA
AGTCGTCTCCTCAATCACTGCATCTCTCAGGTTTGACGGCTCCTTGAATG
TCGATTTGAATGAATTCCAAACCAACTTGGTTCCATACCCTAGAATCCAT
TTCCCGATGGCTACATACGCTCCTGTGGTTTCTGCTGAGAAGTCTTTCCA
TGAAAGTTACTCCGTTCAAGAAATCACTAATAGTTGCTTCGAACCACAAA
TGCAATTGGTCAAATGCGATCCAAGACACGGCAAATACATGGCATGCTGT
TTACTTTACCGTGGCGATGTTGTGCCAAAAGACGTCAATGCAGCAATATC
AACACTGAAAACTAAACGCACTATCCAATTTGTCGATTGGTGTCCAACCG
GATTCAAAATTGGAATCAATTACCAGCCGCCAACTGTTGTTCCTGGAGGA
GATATGGCTAAAGTTTCCAGAGCTGTTTGCATGCTATCTAACACTACAGC
CATTGCTGAAGCATGGTCTAGATTGGATTACAAATTCGATTTGATGTACG
CTAAACGTGCTTTTGTTCACTGGTATGTCGGAGAAGATGAGATTCGTGCA
GGACCATATAGAGGTCTTTTCCACCCAGATCAAATGGTAACTGGAAAAGA
AGACGCAGCAAACAACTATGCACGAGGTCACTACACCATCGGTCGAGAAG
TTATTGACCCAGTCTTGGATAGAATCCGAAAGCTGGTCGATCAATGCAGT
GGTTTACAAGGCTTCTTATTATTCCATTCTTTTGGTGGAGGCACTGGTAG
TGGGTTCTCAGCTCTACTTATGGAGCGCCTTTCCGTAGAATATGGAAAGA
AATCCAAGTTGCAAGTCACTGTCTATCCAGCACCGCGAGTCTCCACAGCT
GTTGTTGAACCATACAACGCTGTCTTGACTACACATACCACTTTGGAACA
CTCCGATTGTGCTTTCATGGTTGATAACGAAGCCATTTATGATATCTGCC
GACGAAACTTGGATATTGATCGGCCAGCTTATGCAAATCTGAATCGTTTG
ATCAGCCAAGTCGTCTCCTCAATCACTGCATCTCTCAGGTTTGACGGCTC
CTTGAATGTCGATTTGAATGAATTCCAAACCAACTTGGTTCCATACCCTA
GAATCCATTTCCCGATGGCTACATACGCTCCTGTGGTTTCTGCTGAGAAG
TCTTTCCATGAAAGTTACTCCGTTCAAGAAATCACTAATAGTTGCTTCGA
ACCACAAATGCAATTGGTCAAATGCGATCCAAGACACGGCAAATACATGG
CATGCTGTTTACTTTACCGTGGCGATGTTGTGCCAAAAGACGTCAATGCA
GCAATATCAACACTGAAAACTAAACGCACTATCCAATTTGTCGATTGGTG
TCCAACCGGATTCAAAATTGGAATCAATTACCAGCCGCCAACTGTTGTTC
CTGGAGGAGATATGGCTAAAGTTTCCAGAGCTGTTTGCATGCTATCTAAC
ACTACAGCCATTGCTGAAGCATGGTCTAGATTGGATTACAAATTCGATTT
GATGTACGCTAAACGTGCTTTTGTTCACTGGTATGTCGGAGAAGGTATGG
AAGAAGGTGAGTTTTCGGAGGCTCGTGAAGATTTAGCTGCTCTTGAGAAA
GATTACGAAGAAATAAGTATTGATGCACAAgcagaagaagatgaagaaga
ttaTTAAGTATGGAAGAAGGTGAGTTTTCGGAGGCTCGTGAAGATTTAGC
TGCTCTTGAGAAAGATTACGAAGAAATAAGTATTGATGCACAAgcagaag
aagatgaagaagattaTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000181_pilon | genome | sc0000181_pilon:723..3063 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1228-1338:2231 |
| Aaloc | 220-1224:526 |
| Aaloc | 4-216:1 |
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