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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000181_pilon:17397..20838- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045119 ID=XLOC_045119|Name=XLOC_045119|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3442bp|location=Sequence derived from alignment at sc0000181_pilon:17397..20838- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACCAAAAAGAAAAACGACTTTAACCACGTGTGGAACTTGTGTTT
TGATATGAAAGTGTTACATGCTCATCCATTCCCACTAAAAAAATATGTAA
GTTTGATTTTATCTTTTACATCAAGGTAAGTAATTTTGGCGGGAACTTTA
CTTTGGCTATTTTCTTTTACCTTTTACCTTTTACCAACCTTATATTAACG
ATGTTATATTTACTATAGGGATACAAACTTTCGCGAGCAGAAACTTTGGC
GATTTTAGCCGTTATTGCGAAAGTAAATATCTTTGAAAATTCTTGGAAGG
GCCATTCGCGAAAGTTTATCCTCGCAAAAAATTCTTAACAAAATAGAAAA
TCTGTGAAACTTCAAATTTTGAATAAATTGTAAGATTTATATGACACTTT
TTAGCTTGTTAAACCTCAGAATTTCAATCCAATTCAAAGTCAGAATTTCA
ATCCAATTCGAGAAGTATTTGTCCCTCTAAGCCATTTTTTCATGTCATGT
GAAAATTTTCATTTTTATGTCTTTATTTTTAAGTCGGGTGAAAGTTTATG
TTGCAAATTTCGCGAATTTTCGACCTCGCGAAAGTTTGTACGCCTAAAGT
AAGGAACGTCCAGCCACCATGCAAATATTTCATTTTTAAGATTAGGTGAA
ACAAAAATAACATAACGATACACCTGCGTGTGTAATCCTAAACCACCCAA
CGAAGGATAGGAGACTTTCTACAATTAGAATCACTCTGCGATTCGAAGGA
ATTAGATTCTCTGTTTTTGAGTGTGAATTAGTATACAACAACGAATCTTG
ATATAATCTTGTCATCTTCTGTATTCTTTCAACAATTTTAGCTTAAAGAT
ATCAGTAATGGAGCAAAAAGAAACGATAAAAACAAGGCAATTCATATCTT
CAGTAACATACACCATATTTGCATTGGTTTTATTGCGTTTATTATTGTTG
CTGAATAACGATAGCTTGATTATAAACATCAGAGGTTTCGATGAACCCAA
AGAAATCCAAATCATACACATCGAGAAGCGTCTAAACGCAATAACCAAGA
CGTATACGAAAGAAAAATATGATTTGAACACTTTGCAATTTCAAATGCAA
AGTCTTTGCAACCAGGATACGTTGAATGATCCTTGCTTGAAAGTTTTACC
CTGGAAACTTCGTCATAAGCGGAGTGTTAACACTACAAGTGTAGATCAAA
GTATTGTCAAACTTCTTGTGCGTCCTTTAGGATATCCGAGCTTCGTTCAA
ATTATCTCCCTAAACACACTCGGTGAGACGCAAACAACTGGAGGTGATTA
TTGGGATGTCAAACTTTGCGGAGATAAAAACACAACTCTAAATATTGAAA
TGATAGACCATGACGACGGCTCTTACACAGGCTTTTTCTACCTACCAGAG
GATCTGATGATATCAAGTAGTAAATTTGAATTGAAATATTTGCTGGAATA
CAGTCAATGTAACGGATTGAGAGACATGCCGGAAAATTGGTTCAAAACAG
GTAATTTCTAATTCGTGAGGTACAATTTGTTCTTCCCTAATAATAAGATT
TTTCATGACAAAAGACCAGCACTCTTGTTTTTGATGAAATTTAGTAGTAC
TGAGAACTTTCCTTAAATTAAAAACCTTGAATTTCACTTTGATTCATGGC
ACATTTGGCAAATATTTTTCATTTTAATCTCTCATTTTCAAAAGGGACGA
TTCAAGGAAAATTTCAACGAGATGGTTCAATTGGAGACCATGATGATTTT
CTCCATCAATTACAAACCACAAAACTATTGTTCCATGTACCACGTGATCA
AAATGAATTCAACTCATTGGTGCAAAATTTTGAAATTTCCCAAAAGAGTC
AAAAGCCTTTCAATAAATATTGTGGATTTTGGCATGATGGCTCGTTCAGG
GAATTTCATCAAAAAGATGTTGCTAATACAGAGCCTCGTTTGAATGTCCA
TGCACCTCCTTTTCAAACATTAAAAATATTTGGAGATTCGATGGGACGAC
ACTTCCACGAATCAATAGTTGCAAATCATTCTCTATGTAAAAACTTGTTC
AAGAAATGCGATTTATCTTACACGTGGGTTTACAAAATGTACAATCGAAC
CAAAGACTTCCATGATGGCGTTCATATTTACGACGATAAAGACTTTAACC
AGACTCATTATCTGGAAGACATTCGTAGAGATTTATACTCCAAAAACATG
AGACATGACAAAAGTGTTTATTTGGTCAACTTTGGCGTCCATACTATTAT
GACTTTACCACTAAACAAGCTACGTGAACTTTTACAAGCATTCTTTGATC
TGATCTCGAATATGAAAAAGAGGTTGGAACCGAGAGAAATACCCCTCATT
ATCTGGAAATCAACAACTTATCCCATCTTAGAGAATTTCAAGCCGAGTAC
AACAACTCAATTACGATTCTTAACAAAGCAGGTTAGTGGATAAGTTCAGG
TTATACAGAAAATTAAAAAAGCTCCATTCCCCAAAATTCCCACGTTTTAA
GGGCTCTGGTCATAGTGAAAAATCAATTTGAAGATAAAACCTTATGTTTT
CGCTTCTTTGACATGTTTAAGAACAAACTGCTTTTGAAAAAATGAATTTA
AGTAATCACATCATGAGTAATTAAGGAATAAGTGTGACATGGACCTTAAT
AAAACGTCATAACGACGCCATTCATATACTTTCCACACAAAAGCCTAATC
TCTTTGGGGAAATCAGTTTATTGTTTCAAACTTTTTTTAAGTTAATGACC
AATAATTTCTTTATTTAGGATTTTTCGAAAAAATTTCTATTTGGCTACAT
CCCAAGTTATAGCTGTTTTCGTATGGAAATTTAGTGGAGAAAATTGCCAA
AAATAAGGTTTTTTGGAGATTTTAAAGAAAAAGATACTGTTATACATTAG
TCTTTTTAAAATGCAGTAATTGACATTTAAGTTGGTGTAAAATCGAAAAA
TTGGGTATTACCAGAGCCCTTAATTTCGAAATAGACCATTACTTGTTCGT
TAATTTTGCATTGGTCTCCTAAACTGGTTTCTAGTTCTCAGACAGAGGCT
TGGATGCCTTAACCCTATGGGCACGCAACGTCTTATGGACATTCAATGGA
TGGCTTTAAGACCTTTGGACGTCCTAGAAACGTACATTAGACATCCAAAA
GACGTTTGTGCCCATTGGGAACATTATATCATCTTATGTTGTTTTCATTT
TTATTTCATTTCAGAGAGTGAGGTATTGGAATTCGTACTCCCTCCAAATG
ATGAAAAGACGGCACATTCCGATCCTTGACGTCACTACCATGGCAACATC
GTATCCATGGGGTCCATATGACATCATGCATTATAACAACCTCGTTTTCA
GACAAGCTGAAGATGATTTAGAAACTTTTATAATTGAGAAGTTAAGTTCA
AAGGACATGTTGAAAAGTAAATGGATGAGTTTCGTTCATTAG Coding sequence (CDS) from alignment at sc0000181_pilon:17397..20838- >XLOC_045119 ID=XLOC_045119|Name=XLOC_045119|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3498bp|location=Sequence derived from alignment at sc0000181_pilon:17397..20838- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACCAAAAAGAAAAACGACTTTAACCACGTGTGGAACTTGTGTTT
TGATATGAAAGTGTTACATGCTCATCCATTCCCACTAAAAAAATATGTAA
GTTTGATTTTATCTTTTACATCAAGATGGCAACCAAAAAGAAAAACGACT
TTAACCACGTGTGGAACTTGTGTTTTGATATGAAAGTGTTACATGCTCAT
CCATTCCCACTAAAAAAATATGTAAGTTTGATTTTATCTTTTACATCAAG
CTTAAAGATATCAGTAATGGAGCAAAAAGAAACGATAAAAACAAGGCAAT
TCATATCTTCAGTAACATACACCATATTTGCATTGGTTTTATTGCGTTTA
TTATTGTTGCTGAATAACGATAGCTTGATTATAAACATCAGAGGTTTCGA
TGAACCCAAAGAAATCCAAATCATACACATCGAGAAGCGTCTAAACGCAA
TAACCAAGACGTATACGAAAGAAAAATATGATTTGAACACTTTGCAATTT
CAAATGCAAAGTCTTTGCAACCAGGATACGTTGAATGATCCTTGCTTGAA
AGTTTTACCCTGGAAACTTCGTCATAAGCGGAGTGTTAACACTACAAGTG
TAGATCAAAGTATTGTCAAACTTCTTGTGCGTCCTTTAGGATATCCGAGC
TTCGTTCAAATTATCTCCCTAAACACACTCGGTGAGACGCAAACAACTGG
AGGTGATTATTGGGATGTCAAACTTTGCGGAGATAAAAACACAACTCTAA
ATATTGAAATGATAGACCATGACGACGGCTCTTACACAGGCTTTTTCTAC
CTACCAGAGGATCTGATGATATCAAGTAGTAAATTTGAATTGAAATATTT
GCTGGAATACAGTCAATGTAACGGATTGAGAGACATGCCGGAAAATTGGT
TCAAAACAGCTTAAAGATATCAGTAATGGAGCAAAAAGAAACGATAAAAA
CAAGGCAATTCATATCTTCAGTAACATACACCATATTTGCATTGGTTTTA
TTGCGTTTATTATTGTTGCTGAATAACGATAGCTTGATTATAAACATCAG
AGGTTTCGATGAACCCAAAGAAATCCAAATCATACACATCGAGAAGCGTC
TAAACGCAATAACCAAGACGTATACGAAAGAAAAATATGATTTGAACACT
TTGCAATTTCAAATGCAAAGTCTTTGCAACCAGGATACGTTGAATGATCC
TTGCTTGAAAGTTTTACCCTGGAAACTTCGTCATAAGCGGAGTGTTAACA
CTACAAGTGTAGATCAAAGTATTGTCAAACTTCTTGTGCGTCCTTTAGGA
TATCCGAGCTTCGTTCAAATTATCTCCCTAAACACACTCGGTGAGACGCA
AACAACTGGAGGTGATTATTGGGATGTCAAACTTTGCGGAGATAAAAACA
CAACTCTAAATATTGAAATGATAGACCATGACGACGGCTCTTACACAGGC
TTTTTCTACCTACCAGAGGATCTGATGATATCAAGTAGTAAATTTGAATT
GAAATATTTGCTGGAATACAGTCAATGTAACGGATTGAGAGACATGCCGG
AAAATTGGTTCAAAACAGGGACGATTCAAGGAAAATTTCAACGAGATGGT
TCAATTGGAGACCATGATGATTTTCTCCATCAATTACAAACCACAAAACT
ATTGTTCCATGTACCACGTGATCAAAATGAATTCAACTCATTGGTGCAAA
ATTTTGAAATTTCCCAAAAGAGTCAAAAGCCTTTCAATAAATATTGTGGA
TTTTGGCATGATGGCTCGTTCAGGGAATTTCATCAAAAAGATGTTGCTAA
TACAGAGCCTCGTTTGAATGTCCATGCACCTCCTTTTCAAACATTAAAAA
TATTTGGAGATTCGATGGGACGACACTTCCACGAATCAATAGTTGCAAAT
CATTCTCTATGTAAAAACTTGTTCAAGAAATGCGATTTATCTTACACGTG
GGTTTACAAAATGTACAATCGAACCAAAGACTTCCATGATGGCGTTCATA
TTTACGACGATAAAGACTTTAACCAGACTCATTATCTGGAAGACATTCGT
AGAGATTTATACTCCAAAAACATGAGACATGACAAAAGTGTTTATTTGGT
CAACTTTGGCGTCCATACTATTATGACTTTACCACTAAACAAGCTACGTG
AACTTTTACAAGCATTCTTTGATCTGATCTCGAATATGAAAAAGAGGTTG
GAACCGAGAGAAATACCCCTCATTATCTGGAAATCAACAACTTATCCCAT
CTTAGAGAATTTCAAGCCGAGTACAACAACTCAATTACGATTCTTAACAA
AGCAGGGACGATTCAAGGAAAATTTCAACGAGATGGTTCAATTGGAGACC
ATGATGATTTTCTCCATCAATTACAAACCACAAAACTATTGTTCCATGTA
CCACGTGATCAAAATGAATTCAACTCATTGGTGCAAAATTTTGAAATTTC
CCAAAAGAGTCAAAAGCCTTTCAATAAATATTGTGGATTTTGGCATGATG
GCTCGTTCAGGGAATTTCATCAAAAAGATGTTGCTAATACAGAGCCTCGT
TTGAATGTCCATGCACCTCCTTTTCAAACATTAAAAATATTTGGAGATTC
GATGGGACGACACTTCCACGAATCAATAGTTGCAAATCATTCTCTATGTA
AAAACTTGTTCAAGAAATGCGATTTATCTTACACGTGGGTTTACAAAATG
TACAATCGAACCAAAGACTTCCATGATGGCGTTCATATTTACGACGATAA
AGACTTTAACCAGACTCATTATCTGGAAGACATTCGTAGAGATTTATACT
CCAAAAACATGAGACATGACAAAAGTGTTTATTTGGTCAACTTTGGCGTC
CATACTATTATGACTTTACCACTAAACAAGCTACGTGAACTTTTACAAGC
ATTCTTTGATCTGATCTCGAATATGAAAAAGAGGTTGGAACCGAGAGAAA
TACCCCTCATTATCTGGAAATCAACAACTTATCCCATCTTAGAGAATTTC
AAGCCGAGTACAACAACTCAATTACGATTCTTAACAAAGCAGAGAGTGAG
GTATTGGAATTCGTACTCCCTCCAAATGATGAAAAGACGGCACATTCCGA
TCCTTGACGTCACTACCATGGCAACATCGTATCCATGGGGTCCATATGAC
ATCATGCATTATAACAACCTCGTTTTCAGACAAGCTGAAGATGATTTAGA
AACTTTTATAATTGAGAAGTTAAGTTCAAAGGACATGTTGAAAAGTAAAT
GGATGAGTTTCGTTCATTAGAGAGTGAGGTATTGGAATTCGTACTCCCTC
CAAATGATGAAAAGACGGCACATTCCGATCCTTGACGTCACTACCATGGC
AACATCGTATCCATGGGGTCCATATGACATCATGCATTATAACAACCTCG
TTTTCAGACAAGCTGAAGATGATTTAGAAACTTTTATAATTGAGAAGTTA
AGTTCAAAGGACATGTTGAAAAGTAAATGGATGAGTTTCGTTCATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000181_pilon | genome | sc0000181_pilon:17397..20838 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1522-1749:229 |
| Aaloc | 787-1521:1747 |
| Aaloc | 127-783:2601 |
| Aaloc | 1-123:3443 |
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