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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000391_pilon:162410..164731- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045039 ID=XLOC_045039|Name=XLOC_045039|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2322bp|location=Sequence derived from alignment at sc0000391_pilon:162410..164731- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGGTCAAGTAAGCCAAACCATTTACATTAATAATCTCAATGAGAA
GATTAAACAAGAAGGTATGACATTTTATCAATATTTGATCAATTTTGGTT
AACCTTGAAAACAAATGAAATTATGAAAATCCTTTTTTATGTTGTCATCA
TTATTGAATTCCCAGTAAGTCTATTTTCCTTATTATTTGGCTAATTTCAT
CCACATATTTTTGAGTGTATGTGTGACTTCCCTATTGATTTTGAGTACCT
GAAAATCAGACCAGTCTTAAGACAGTCTTTTAAGGGGCGGTAAATGACTG
GGAAAATTTACCACAAGTCTATTTCGAAGCATCCAGTCCCAGACTGGATT
TTACCGGCCACAACCAGTCAAACAAGCAAGCCCTGAGCATCTACAAGCAA
TCAGGACAATTTGAAATCAGATTTTCTTGAAGGTCTGAAGGTGGATCTAA
AACAAAAGTTTTGACTGCTATTTGACTGCTTGAATACCATACTAAGACCA
GTCTGATTTCCAGATATTTTATATTGCTTGGGAAGTCACATACTTGATAA
ATAACTTAGAATTGTTCAAAGTGGAAGTTGAAAGTTTTACCTTAATACAA
AACTGACAGCTGGCAAGGACTTCAACAATTAAGATAATCCAAAATCAAAT
GCTCCACAATTTTCTCATTTCAGAGGTCAAGAAATCATTGGAAGCAATGT
TTAGCCAGTTCGGGACAATCTTGGATGTTGTTGCAATGAAAACATTGAAA
ATGAAAGGACAAGCTTTTGTAGTTTTTAAAGATGCAAGCAGTGCGACACA
AGCAATGCGCTCTATGCAAGGGTTTCCTTTTCACGATAAACCATTGGTAC
TTCATGATTAATTTCTTTTCTTATAACAATAATTAAATATTCAAATTTTT
AGGGGTTTGTTTCGGACATGCAAGCTCTTTTTTATTACCCATTTTATATT
TTTAAAAATCTAAACACCAAATTTTGTACTTTTGGTTTGGAAAGCCTAGT
TTCTATAACTTTGTAGTTTACTCAATTTAAAAACTCAAATTGTTCAGTTC
AATTTGTAATGATGATAATAATGACAATAATGTCTTGTCTTCATTTTAGA
GGATAGCATACGCTAAATCTAAATCAGATGTAGTTGCAAAGATGGACAAC
ACTTTTGTTCCAAGAGACAAGAAGAAGAGGAAGGCTGAAGAAGGTACATT
TAAAAAAAATTAACCAGGAAATGTTATTTTCAGGAATGTTTTCTTCTTTA
TTCTTTATCAGATCAAGAGGAAGTAAATCAGGTATAACAGAAGCTAAATT
TTTTGGAAATATCCAGTACAACAATTGTCATAGCAGCTGTAAACCCTGTA
ATGTGCTTACAGTATGTAAGTGAAGTTTTTATTATGATTAATGACTGTTT
CTATCTTAAAAACTCTATTTTTTTGTCTTGCAGCCAAGAAGAAACTTCAA
GCTATTGCTGCAAAACAAGCTAAAATGCAAAACCAGTTCAATCCTATGAT
GCAGCCTGGTGGTTAGTCCATAATGATTTCAAATAGAATTTCTTACCTAG
TTTTCATCTTATTATTAAGTCTCACTCACAGAAAAACTTCTTAAACTTAA
ACTTAATGGATTGATTTGGATGAATTCATTTTAAGATTAAAATTTTCTCT
TTTTCATGAGAGCATTTTTTCAAAATATTTTGTTTCAGTCAACCCTTACC
AAGCAATGGGACAACCACAACAGCAACAAATGCCAGCCGTTGAACCTCCA
CCAAATCATATTTTATTCTTGTCTAATTTACCAAATGAAACCACCCAACT
TATGTTGTCAATGCTCTTCCAACAGTAAGCCTTTAGAAATGAACTTTTTC
GACGATCTTGCCGTTCCCTTTCTTTTAATATTAAAAATTCCTGACAGAAT
CACATTAATTAGAAAAGGTAGATATTCAAATATTTATTGCTTAAAGAATC
CATCTTCCGTTGATCATGATCTTCTTCTAAAATGGTTTACTTCCGCAAAA
TTAGTAGTATGAGCTTAGGGATGCGCAAAAAACTGTTAGCAAGTAATGTC
TAGGATCATTATTTGTGAAGTGTTAGATCTAGTTTAGGTCTTACATATTT
TTCTCATTTTATATTAATTTTCTCACCTATATTCATCTGGCTTAATAAAA
ATCTTTCAATAGGGTTCCTGGTTACAGAGAAGCTCGTCTTGTCAACGGAA
GACACGATATTGCATTTGTTGAATTTGAAAATGCTGACCAAGCAAAACGA
GCTAAAGAACAATTGAATGGTTACAAGATCAGTCCCTCGCATCCTATGGT
TATTACTTACGCTAAGAAATAG Coding sequence (CDS) from alignment at sc0000391_pilon:162410..164731- >XLOC_045039 ID=XLOC_045039|Name=XLOC_045039|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1410bp|location=Sequence derived from alignment at sc0000391_pilon:162410..164731- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGGTCAAGTAAGCCAAACCATTTACATTAATAATCTCAATGAGAA
GATTAAACAAGAAGATGGAGGGTCAAGTAAGCCAAACCATTTACATTAAT
AATCTCAATGAGAAGATTAAACAAGAAGAGGTCAAGAAATCATTGGAAGC
AATGTTTAGCCAGTTCGGGACAATCTTGGATGTTGTTGCAATGAAAACAT
TGAAAATGAAAGGACAAGCTTTTGTAGTTTTTAAAGATGCAAGCAGTGCG
ACACAAGCAATGCGCTCTATGCAAGGGTTTCCTTTTCACGATAAACCATT
GAGGTCAAGAAATCATTGGAAGCAATGTTTAGCCAGTTCGGGACAATCTT
GGATGTTGTTGCAATGAAAACATTGAAAATGAAAGGACAAGCTTTTGTAG
TTTTTAAAGATGCAAGCAGTGCGACACAAGCAATGCGCTCTATGCAAGGG
TTTCCTTTTCACGATAAACCATTGAGGATAGCATACGCTAAATCTAAATC
AGATGTAGTTGCAAAGATGGACAACACTTTTGTTCCAAGAGACAAGAAGA
AGAGGAAGGCTGAAGAAGAGGATAGCATACGCTAAATCTAAATCAGATGT
AGTTGCAAAGATGGACAACACTTTTGTTCCAAGAGACAAGAAGAAGAGGA
AGGCTGAAGAAGCCAAGAAGAAACTTCAAGCTATTGCTGCAAAACAAGCT
AAAATGCAAAACCAGTTCAATCCTATGATGCAGCCTGGTGCCAAGAAGAA
ACTTCAAGCTATTGCTGCAAAACAAGCTAAAATGCAAAACCAGTTCAATC
CTATGATGCAGCCTGGTGTCAACCCTTACCAAGCAATGGGACAACCACAA
CAGCAACAAATGCCAGCCGTTGAACCTCCACCAAATCATATTTTATTCTT
GTCTAATTTACCAAATGAAACCACCCAACTTATGTTGTCAATGCTCTTCC
AACATCAACCCTTACCAAGCAATGGGACAACCACAACAGCAACAAATGCC
AGCCGTTGAACCTCCACCAAATCATATTTTATTCTTGTCTAATTTACCAA
ATGAAACCACCCAACTTATGTTGTCAATGCTCTTCCAACAGGTTCCTGGT
TACAGAGAAGCTCGTCTTGTCAACGGAAGACACGATATTGCATTTGTTGA
ATTTGAAAATGCTGACCAAGCAAAACGAGCTAAAGAACAATTGAATGGTT
ACAAGATCAGTCCCTCGCATCCTATGGTTATTACTTACGCTAAGAAATAG
GGTTCCTGGTTACAGAGAAGCTCGTCTTGTCAACGGAAGACACGATATTG
CATTTGTTGAATTTGAAAATGCTGACCAAGCAAAACGAGCTAAAGAACAA
TTGAATGGTTACAAGATCAGTCCCTCGCATCCTATGGTTATTACTTACGC
TAAGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000391_pilon | genome | sc0000391_pilon:162410..164731 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 547-705:160 |
| Aaloc | 412-543:633 |
| Aaloc | 334-408:888 |
| Aaloc | 238-330:1224 |
| Aaloc | 67-237:1648 |
| Aaloc | 1-63:2323 |
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