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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000099_pilon:657053..662005+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044994 ID=XLOC_044994|Name=XLOC_044994|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4953bp|location=Sequence derived from alignment at sc0000099_pilon:657053..662005+ (Clytia hemisphaerica_ch_hm2_pilon)
atggCTCCTCGAAAAGGGAAGGTACAGAAAGAAGTAGAGGTCGTCTCACT
CGGTCCTCAGGTAAATGTAATAGCCCTGTATTTCTATGCTCGGCATATTC
TTACTCGTGTAAGACAATCACTCAGCTTCGATGATCTTCTTTACTTTTAC
AGGTTGCTGAAGGTGAAAATGTCTTTGGTGTTGCCCACATTTTTGCATCA
TTCAATGACACATTTGTTCACATCACTGATTTATCTGGAAAGTAAGTTCA
TTACACCTTTCACCGcgtatattattttttcagacAGTTTTGTGTTATAG
TTTGAACAATCTATATTGGTTGCTTGAAAAGGTTTATTGTGGAACTTATT
TGTGGAGGTAACGAAAACGACGATGGTCGATGGGTTCGATATATAATCAT
ATTATAATCATGGATATGAAATGATGAATCTCTTGATGTCTCCTGGTATG
TTACATGGTATTGATATTTATTGTATACTGTTATATTGGATTTGAATGCT
AATACATACGTTTCTTGGAAACTTGTATTGATTTGGTTGCATAAAATCTC
CATATATTGAATAAAAACAGTGTactggattttttgaaaaatatcaagtt
tAGATTGGAACCTGATTTTATCCACATCATTGAAAGCTGGGCTTGTGTTT
ATTTGGGATTTGTAATTTCTATATTTCGAGACAATAAACAATTTGTTTGG
AATGGTTTGCTagtttatttacttttcatgaTGGACCATGACATAGGCGG
TGGTTACACGTAGCCGTGGTGAAATTCGTGAAAACCCTTTTTCTCAATCC
ggggtgaaaattttaaatcaccCCGGCGTGAAAACCTAATAATGCATAAC
TTTTAGATTTTATCAGTACACAACATCAAGTAGTGTTGAAAAACTCTTTC
GTCTCTCACACGCGAGCAGGAAAGATAGCTCCTCTTGATAGAAAAAGCTT
ATTGATGTTAATTTCTAGTATCACTACAATATTATCGCTTAGCCTTCTGC
CAATGCAAATTCATTCAGTTTTAATTGTAAAACTGTTGGCCCAAAAACGA
GAGTTTGAGAGATTGCAGATGGAGGCtattctttcaaaaaacattgCAAA
GCAAAGATATCATCGTCTACGTTTGAGTTAAGAGTTTGACAGTCCCTTGT
TTTCTGGTATCTCTGGGCTAAAAGAGCCTCAGCATCAACTTTGCTCGCGA
GCACTTTTGCAGGAAACAACTTTCAGGAttgcaaaataaaacaaaaacag
acgcacatttttttttcaacccggggtgaaaaagaaattgtgtatacatg
taaaaatctgcaaaaatttgccaaaaaaatcctcaaaaaaattttcactc
cGGTCCTCAGGACCGGGGTGAAATCAACCCCGGGGTGAGTTCAACCCGCC
TAAAAACGATTTGACCCCGCCTAAATACGTGTATACAGAAACAGTGTTTT
CTTTATAGACCGTAGTGAATTTCACCCCAGggtgaaatctttttttattt
caccccGGCTACGTGTGACCACTGCCTTAGATAACTAAAAGCACTGGATG
TAAAATATCTGATGTTGTATGTGAGAACTTTTCACCTCAGGACAATCCAA
ATACTGAAAGTAAACAGTGAAGTCAGGTAATTTGCACAGCCATCGATCAA
AACAGCAAAATGAAAAAGCATGAACTATGTAGCCCCGCTCGCAGTTCTAC
TCTAACTATTTTTATTATGAtttaatttgtattttaatgaccagacgggt
cattcattgagggctatgcatcttTGCCTCCACTGGTGCAAGTTACCGGA
TCTCACAGTGTTGTGTACAAGTATTATTGGGCTGTGGTCTTAAATAACTT
GCATTTGCACTGGTTTAGATCATTTTTCGGGTCCCAACAGTGAGTCGGTC
CGTTCGCAATTGGAATTCGTAGCTCAGAAATGGGTCACTACACCCCTCCA
CTCTCCACACTAGGTTCTACCCCCTCACTAAATTTGATGGAACCGCCCTC
TAGTTGCAATGGCCCTTctaaaaaatggtgaaaatagaaTGTAAGTAAGG
CGGTTAtcaaaaaaatgctctgttGGCATTGCAACGGGTGTTagaaatgc
atgcgggcggtcaaaaacattcccgggttttttaATCATGCCAGTAACTc
gggggcgggtggtaacgcgagaaaaacaatttttcgatggtcttcagagc
aattgagaaaaaagctatactttaaaagaacaaattgcttttcccagatt
tttttccgcatctccgcaccggaaaatcagctgACAATTTGATGCGGGca
ggtgacgcgaatagaacaatttttcgatgaccgcctcagaacatttttag
gtgaaaaaaaGGGTAAggttttcaaaaatcacattcgctaattttagttc
tttcactttttagcttatttagcatgggaatgtcccaataAAGTTTCCAT
TTCTGccaaaatggattttcttttcatttgaaataataattcATAAATGA
AATGATATGAAATCTAAATAGCATTTCTGCTATTTTTCTCACAGCGACAG
CCCCCCTGCAAATTTTTCCCATAAAAGGAAGAGACTGGATGTAGACCACt
ttttttggggagctaaaatctcatcacttaacgtgggggctaaaataatt
cagcttaatagttgaAACTGAGACTGAAAAATTTTTGTCTGCGGcacaat
atttttacaaaaagtgttcaaaatatttgaaactaacttaaaccatagag
gtataaagaaaaacaggagttgaatgtgtcggtaattggtcgttaaagtc
ttttgatttcttttataaaatgtatcaaaagaaattctaagctcgcccga
tgaaataagactttttagtagaactcaagtttgctatgaacattctaata
atcagtattgaagattatggccttttaatatacgaaaattagataaaaat
tcgtccacgaagcaagtttatgttccatttcgctatccgttcaattttgt
tttgaaaagatattttctcaagccagaaaatgaaaagttctttataagca
cacacgatttcagactcaatctgtagacataaagtcgctggagaattttg
gaggaaagtatcaagcaatagagttcaccttaaggaaaacattgatcgaa
aaatcttatcatttgatgaaggattgccaagtttacaggcctttttttag
tccaaatattttcttacactgatgtcagaaacaatgaatctcgtctcatc
taatttctaacgcttaaatgagccaataggatttcacctatggataaaaa
agctcattaaaaatgcacgatatatgagattatgagcatgcatacatcgt
aacttttttaatcgtagggcgagcttggttacaatagcatacttctcctg
tttctttatacctccatgcttaAACATAGAACTGGATGCAATTTACATTG
AAAAACCCTTTTACTTGGATTGATATTTTGAAAGTGTCTTCTAGGGTCGA
AAGTCTTCAGGggtaacaaaaaattcataaatctttggggggacttaaaa
ctcagagGGAACCTAAtctttgcctgggacctaaacccaggctgacaaTA
TGTTTTCTCATACcagcatgagattggaaaggctTCGTTCTAGAGTTATA
CAAAAAATATTGTGCTTAATTATAAAACTGTAACTTTCTGAAGGACAGTT
TTCAACAACTTCCAGAAAGTGGCAGTGAAATCTTAGCAtgggaatcttat
gcaaaacaaTGGTAGTTAGGAAATTTCAAAGCATAAATGTCCTGGATTAA
GATAGTTTTGCTTCTGTTATGCTATACaactttgaaatttcaatttttct
cgaGAAGAGCTATGTTAATTTGGTAGTCTTTTCCTCATTTGGAAAGATTT
CTTTCCTAATTGCAAAAATTCCTGACCAAGCAGAACTGCAAAAGTTTGAC
TACACTAAATTTACATgttgaaatcaaaagaaatatatTAGTCTGTGTTG
CTATCTGGTTTGGTCTGCTCCCGTTTTGAGAAGCTCTGCAACTTTACAAT
TCATAACCTGTACTGGAATTTATAAAATTCTCAAATGGTACAAGTTTTAA
TTctgatcaatattttttcacaGGGAAACCATCTCCCGAATCACTGGAGG
AATGAAAGTTAAGGCTGACAGAGATGAATCTTCTCCCTATGCCGCTATGT
TGGCTGCCCAAGATGTTGCTGTTCGATGCAAGGAAATTGGTATCACTGCC
TTACACGTCAAATTGAGAGCCACTGGTGGTAACAGAACCAAAACACCTGG
ACCTGGTGCTCAATCTGCATTAAGGGCTTTGGCTCGTTCTGGAATGAAAA
TTGGTCGTATTGGTATGTATTATTTACTCCAAAAGTCCTGACGCTTCATG
TACGGTTCAAATGCCCAAGTTAAAATTTATTCCTCCATCCTTCATAATCT
CTATTGCTTCAGACTTAAATTTGATTTCATGCATTTTGGGCTTTTGTTAC
tgattttttggggaaaatattgctctgattttctgaaaatgaattttttg
aaaactaccttgatttcatgcattttgcaaaaagagGCCAACCAAATTCA
GATTGCATTTTGATTAAGTTAAATAATTTACGTATTGAAATTCCAAATCC
TTGCttcttttttgggggggggtggGGCTTTCTGGAAAGCTGAAAATATC
ttcttaaaaagctttttatgGAATTTAGGTAAAAATGAAATATGCCATGT
TGTAGaaaaaaaCCCTGACCTTAACTGCGTTAAAGATAGGGCCTAAGGAA
TGGTGTTCCTAACTTTGGTAGTGAACAACCAAAATAGATTTTTCTTAATT
TGCTCTTAATAAacttttcattcattcattttcagAGGATGTCACACCAA
TCCCATCCGATTGCACAAGAAGGAAGGGAGGTCGTCGTGGAAGACGTCTG
TAA Coding sequence (CDS) from alignment at sc0000099_pilon:657053..662005+ >XLOC_044994 ID=XLOC_044994|Name=XLOC_044994|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=912bp|location=Sequence derived from alignment at sc0000099_pilon:657053..662005+ (Clytia hemisphaerica_ch_hm2_pilon)
atggCTCCTCGAAAAGGGAAGGTACAGAAAGAAGTAGAGGTCGTCTCACT
CGGTCCTCAGatggCTCCTCGAAAAGGGAAGGTACAGAAAGAAGTAGAGG
TCGTCTCACTCGGTCCTCAGGTTGCTGAAGGTGAAAATGTCTTTGGTGTT
GCCCACATTTTTGCATCATTCAATGACACATTTGTTCACATCACTGATTT
ATCTGGAAAGTTGCTGAAGGTGAAAATGTCTTTGGTGTTGCCCACATTTT
TGCATCATTCAATGACACATTTGTTCACATCACTGATTTATCTGGAAAGG
AAACCATCTCCCGAATCACTGGAGGAATGAAAGTTAAGGCTGACAGAGAT
GAATCTTCTCCCTATGCCGCTATGTTGGCTGCCCAAGATGTTGCTGTTCG
ATGCAAGGAAATTGGTATCACTGCCTTACACGTCAAATTGAGAGCCACTG
GTGGTAACAGAACCAAAACACCTGGACCTGGTGCTCAATCTGCATTAAGG
GCTTTGGCTCGTTCTGGAATGAAAATTGGTCGTATTGGGAAACCATCTCC
CGAATCACTGGAGGAATGAAAGTTAAGGCTGACAGAGATGAATCTTCTCC
CTATGCCGCTATGTTGGCTGCCCAAGATGTTGCTGTTCGATGCAAGGAAA
TTGGTATCACTGCCTTACACGTCAAATTGAGAGCCACTGGTGGTAACAGA
ACCAAAACACCTGGACCTGGTGCTCAATCTGCATTAAGGGCTTTGGCTCG
TTCTGGAATGAAAATTGGTCGTATTGAGGATGTCACACCAATCCCATCCG
ATTGCACAAGAAGGAAGGGAGGTCGTCGTGGAAGACGTCTGTAAAGGATG
TCACACCAATCCCATCCGATTGCACAAGAAGGAAGGGAGGTCGTCGTGGA
AGACGTCTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099_pilon | genome | sc0000099_pilon:657053..662005 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 391-456:4888 |
| Aaloc | 151-387:4125 |
| Aaloc | 61-147:153 |
| Aaloc | 1-60:1 |
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